RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 MCM6Q14566 821 aa8.28□□□□□ -1.08
GDE1-202ENST00000563645 NBPF20Q3BBV1 942 aa8.28□□□□□ -1.08
GDE1-202ENST00000563645 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
GDE1-202ENST00000563645 CCDC116Q8IYX3 515 aa8.28□□□□□ -1.08
GDE1-202ENST00000563645 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
GDE1-202ENST00000563645 BMP1P13497 986 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 NR1H3Q13133 447 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 TBC1D2BQ9UPU7 963 aa8.27□□□□□ -1.09
GDE1-202ENST00000563645 INTS6LQ5JSJ4 861 aaKnown RBP8.26□□□□□ -1.09
GDE1-202ENST00000563645 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
GDE1-202ENST00000563645 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
GDE1-202ENST00000563645 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
GDE1-202ENST00000563645 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
GDE1-202ENST00000563645 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
GDE1-202ENST00000563645 PPP1R26Q5T8A7 1209 aaPredicted RBP8.24□□□□□ -1.09
GDE1-202ENST00000563645 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
GDE1-202ENST00000563645 TRIM47Q96LD4 638 aa8.24□□□□□ -1.09
GDE1-202ENST00000563645 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
GDE1-202ENST00000563645 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
GDE1-202ENST00000563645 ESPNB1AK53 854 aa8.23□□□□□ -1.09
GDE1-202ENST00000563645 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
GDE1-202ENST00000563645 MRPL14Q6P1L8 145 aaKnown RBP8.23□□□□□ -1.09
GDE1-202ENST00000563645 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
GDE1-202ENST00000563645 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
GDE1-202ENST00000563645 RAB15P59190 212 aa8.21□□□□□ -1.1
GDE1-202ENST00000563645 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
GDE1-202ENST00000563645 IRF5Q13568 498 aa8.21□□□□□ -1.1
GDE1-202ENST00000563645 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
GDE1-202ENST00000563645 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
GDE1-202ENST00000563645 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
GDE1-202ENST00000563645 SCARF1Q14162 830 aa8.2□□□□□ -1.1
GDE1-202ENST00000563645 ABL2P42684 1182 aa8.19□□□□□ -1.1
GDE1-202ENST00000563645 FLIIQ13045 1269 aa8.19□□□□□ -1.1
GDE1-202ENST00000563645 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
GDE1-202ENST00000563645 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
GDE1-202ENST00000563645 PURBQ96QR8 312 aaKnown RBP8.19□□□□□ -1.1
GDE1-202ENST00000563645 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
GDE1-202ENST00000563645 GIGYF1O75420 1035 aaPredicted RBP8.18□□□□□ -1.1
GDE1-202ENST00000563645 UPP2O95045 317 aa8.18□□□□□ -1.1
GDE1-202ENST00000563645 Q6ZVU0 165 aa8.18□□□□□ -1.1
GDE1-202ENST00000563645 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
GDE1-202ENST00000563645 CBLBQ13191 982 aa8.17□□□□□ -1.1
GDE1-202ENST00000563645 CCDC125Q86Z20 511 aa8.17□□□□□ -1.1
GDE1-202ENST00000563645 ZNF784Q8NCA9 323 aaPredicted RBP8.17□□□□□ -1.1
GDE1-202ENST00000563645 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
GDE1-202ENST00000563645 BMP2P12643 396 aa8.16□□□□□ -1.1
GDE1-202ENST00000563645 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
GDE1-202ENST00000563645 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
GDE1-202ENST00000563645 TSEN34Q9BSV6 310 aaKnown RBP8.16□□□□□ -1.1
GDE1-202ENST00000563645 EIF4G2P78344 907 aaKnown RBP eCLIP8.15□□□□□ -1.1
GDE1-202ENST00000563645 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
GDE1-202ENST00000563645 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
GDE1-202ENST00000563645 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
GDE1-202ENST00000563645 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
GDE1-202ENST00000563645 LILRA1O75019 489 aa8.14□□□□□ -1.11
GDE1-202ENST00000563645 ADH1AP07327 375 aa8.13□□□□□ -1.11
GDE1-202ENST00000563645 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
GDE1-202ENST00000563645 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
GDE1-202ENST00000563645 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
GDE1-202ENST00000563645 RAD21O60216 631 aa8.12□□□□□ -1.11
GDE1-202ENST00000563645 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
GDE1-202ENST00000563645 CEP126Q9P2H0 1117 aa8.12□□□□□ -1.11
GDE1-202ENST00000563645 SPINT1O43278 529 aa8.11□□□□□ -1.11
GDE1-202ENST00000563645 ERVK-9P63128 1117 aa8.11□□□□□ -1.11
GDE1-202ENST00000563645 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
GDE1-202ENST00000563645 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
GDE1-202ENST00000563645 SOS2Q07890 1332 aaPredicted RBP8.1□□□□□ -1.11
GDE1-202ENST00000563645 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
GDE1-202ENST00000563645 SOX11P35716 441 aa8.1□□□□□ -1.11
GDE1-202ENST00000563645 RELBQ01201 579 aa8.1□□□□□ -1.11
GDE1-202ENST00000563645 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
GDE1-202ENST00000563645 SOBPA7XYQ1 873 aa8.09□□□□□ -1.11
GDE1-202ENST00000563645 MAN1A2O60476 641 aa8.09□□□□□ -1.11
GDE1-202ENST00000563645 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
GDE1-202ENST00000563645 PTGIRP43119 386 aa8.08□□□□□ -1.12
GDE1-202ENST00000563645 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
GDE1-202ENST00000563645 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
GDE1-202ENST00000563645 CCDC85AQ96PX6 553 aaPredicted RBP8.08□□□□□ -1.12
GDE1-202ENST00000563645 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
GDE1-202ENST00000563645 SCTRP47872 440 aa8.07□□□□□ -1.12
GDE1-202ENST00000563645 SEMA3FQ13275 785 aa8.07□□□□□ -1.12
GDE1-202ENST00000563645 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
GDE1-202ENST00000563645 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
GDE1-202ENST00000563645 TERTO14746 1132 aaKnown RBP8.06□□□□□ -1.12
GDE1-202ENST00000563645 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
GDE1-202ENST00000563645 CYP2U1Q7Z449 544 aa8.06□□□□□ -1.12
GDE1-202ENST00000563645 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
GDE1-202ENST00000563645 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
GDE1-202ENST00000563645 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
GDE1-202ENST00000563645 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
GDE1-202ENST00000563645 CTSOP43234 321 aaPredicted RBP8.05□□□□□ -1.12
GDE1-202ENST00000563645 NFX1Q12986 1120 aaKnown RBP8.05□□□□□ -1.12
GDE1-202ENST00000563645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.05□□□□□ -1.12
GDE1-202ENST00000563645 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
GDE1-202ENST00000563645 NXF1Q9UBU9 619 aaKnown RBP8.05□□□□□ -1.12
GDE1-202ENST00000563645 DOLKQ9UPQ8 538 aa8.05□□□□□ -1.12
GDE1-202ENST00000563645 TRAK2O60296 914 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms