RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 BCL9O00512 1426 aa26.8■■□□□ 1.88
E4F1-203ENST00000563643 SHANK3Q9BYB0 1731 aa26.77■■□□□ 1.88
E4F1-203ENST00000563643 ACEP12821 1306 aa26.77■■□□□ 1.88
E4F1-203ENST00000563643 GCP02774 474 aa26.77■■□□□ 1.88
E4F1-203ENST00000563643 MARCH10Q8NA82 808 aaPredicted RBP26.77■■□□□ 1.88
E4F1-203ENST00000563643 AATKQ6ZMQ8 1374 aa26.76■■□□□ 1.87
E4F1-203ENST00000563643 TOPAZ1Q8N9V7 1692 aa26.73■■□□□ 1.87
E4F1-203ENST00000563643 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
E4F1-203ENST00000563643 TOM1L2Q6ZVM7 507 aa26.71■■□□□ 1.87
E4F1-203ENST00000563643 ZBTB7CA1YPR0 619 aa26.7■■□□□ 1.86
E4F1-203ENST00000563643 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.86
E4F1-203ENST00000563643 AKAP12Q02952 1782 aa26.69■■□□□ 1.86
E4F1-203ENST00000563643 WNK3Q9BYP7 1800 aa26.68■■□□□ 1.86
E4F1-203ENST00000563643 CDK19Q9BWU1 502 aa26.68■■□□□ 1.86
E4F1-203ENST00000563643 CCDC61Q9Y6R9 512 aa26.68■■□□□ 1.86
E4F1-203ENST00000563643 PLEKHG3A1L390 1219 aa26.67■■□□□ 1.86
E4F1-203ENST00000563643 CDCA7Q9BWT1 371 aaPredicted RBP26.67■■□□□ 1.86
E4F1-203ENST00000563643 PAPPAQ13219 1627 aa26.66■■□□□ 1.86
E4F1-203ENST00000563643 KLHL34Q8N239 644 aa26.66■■□□□ 1.86
E4F1-203ENST00000563643 ARHGEF28Q8N1W1 1705 aaKnown RBP26.65■■□□□ 1.86
E4F1-203ENST00000563643 WDR17Q8IZU2 1322 aa26.64■■□□□ 1.85
E4F1-203ENST00000563643 ZNF827Q17R98 1081 aa26.6■■□□□ 1.85
E4F1-203ENST00000563643 HSPA6P17066 643 aa26.59■■□□□ 1.85
E4F1-203ENST00000563643 SLIT3O75094 1523 aa26.59■■□□□ 1.85
E4F1-203ENST00000563643 ATP10DQ9P241 1426 aa26.58■■□□□ 1.85
E4F1-203ENST00000563643 AXIN2Q9Y2T1 843 aa26.58■■□□□ 1.85
E4F1-203ENST00000563643 NHSQ6T4R5 1651 aa26.57■■□□□ 1.84
E4F1-203ENST00000563643 EXOC5O00471 708 aa26.57■■□□□ 1.84
E4F1-203ENST00000563643 POLD1P28340 1107 aa26.57■■□□□ 1.84
E4F1-203ENST00000563643 NLGN2Q8NFZ4 835 aa26.57■■□□□ 1.84
E4F1-203ENST00000563643 KDM2AQ9Y2K7 1162 aa26.57■■□□□ 1.84
E4F1-203ENST00000563643 COL18A1P39060 1754 aa26.56■■□□□ 1.84
E4F1-203ENST00000563643 NLRP6P59044 892 aa26.55■■□□□ 1.84
E4F1-203ENST00000563643 TNS2Q63HR2 1409 aa26.55■■□□□ 1.84
E4F1-203ENST00000563643 GRIN3BO60391 1043 aa26.54■■□□□ 1.84
E4F1-203ENST00000563643 YBX3P16989 372 aaKnown RBP eCLIP26.54■■□□□ 1.84
E4F1-203ENST00000563643 SLC16A10Q8TF71 515 aa26.54■■□□□ 1.84
E4F1-203ENST00000563643 CARD10Q9BWT7 1032 aa26.54■■□□□ 1.84
E4F1-203ENST00000563643 BRD4O60885 1362 aaPredicted RBP26.54■■□□□ 1.84
E4F1-203ENST00000563643 PPIP5K1Q6PFW1 1433 aa26.54■■□□□ 1.84
E4F1-203ENST00000563643 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
E4F1-203ENST00000563643 ACSBG1Q96GR2 724 aa26.53■■□□□ 1.84
E4F1-203ENST00000563643 CPSF1Q10570 1443 aaKnown RBP26.53■■□□□ 1.84
E4F1-203ENST00000563643 GPBP1L1Q9HC44 474 aaPredicted RBP26.52■■□□□ 1.84
E4F1-203ENST00000563643 CSB-PGBD3P0DP91 1061 aa26.5■■□□□ 1.83
E4F1-203ENST00000563643 LRRC4BQ9NT99 713 aa26.5■■□□□ 1.83
E4F1-203ENST00000563643 COL24A1Q17RW2 1714 aa26.49■■□□□ 1.83
E4F1-203ENST00000563643 USP6P35125 1406 aa26.48■■□□□ 1.83
E4F1-203ENST00000563643 AKT1S1Q96B36 256 aa26.48■■□□□ 1.83
E4F1-203ENST00000563643 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
E4F1-203ENST00000563643 PNPLA7Q6ZV29 1317 aa26.46■■□□□ 1.83
E4F1-203ENST00000563643 ABCC6O95255 1503 aa26.46■■□□□ 1.83
E4F1-203ENST00000563643 TRPM1Q7Z4N2 1603 aa26.46■■□□□ 1.83
E4F1-203ENST00000563643 BTAF1O14981 1849 aa26.45■■□□□ 1.82
E4F1-203ENST00000563643 SRPK2P78362 688 aaKnown RBP26.45■■□□□ 1.82
E4F1-203ENST00000563643 ARHGEF25Q86VW2 580 aa26.45■■□□□ 1.82
E4F1-203ENST00000563643 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
E4F1-203ENST00000563643 QSER1Q2KHR3 1735 aa26.44■■□□□ 1.82
E4F1-203ENST00000563643 PIK3C2AO00443 1686 aa26.43■■□□□ 1.82
E4F1-203ENST00000563643 ADCY9O60503 1353 aa26.43■■□□□ 1.82
E4F1-203ENST00000563643 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
E4F1-203ENST00000563643 CABP2Q9NPB3 220 aa26.4■■□□□ 1.82
E4F1-203ENST00000563643 RGPD5Q99666 1765 aa26.4■■□□□ 1.82
E4F1-203ENST00000563643 TFCP2L1Q9NZI6 479 aa26.39■■□□□ 1.82
E4F1-203ENST00000563643 SLC27A3Q5K4L6 730 aa26.38■■□□□ 1.81
E4F1-203ENST00000563643 SOX12O15370 315 aa26.37■■□□□ 1.81
E4F1-203ENST00000563643 KCNH5Q8NCM2 988 aa26.37■■□□□ 1.81
E4F1-203ENST00000563643 CABP1Q9NZU7 370 aa26.36■■□□□ 1.81
E4F1-203ENST00000563643 TUBGCP6Q96RT7 1819 aa26.34■■□□□ 1.81
E4F1-203ENST00000563643 QRICH2Q9H0J4 1663 aa26.34■■□□□ 1.81
E4F1-203ENST00000563643 NFAT5O94916 1531 aa26.3■■□□□ 1.8
E4F1-203ENST00000563643 IL2RBP14784 551 aa26.3■■□□□ 1.8
E4F1-203ENST00000563643 KCNQ4P56696 695 aa26.3■■□□□ 1.8
E4F1-203ENST00000563643 APLP1P51693 650 aa26.29■■□□□ 1.8
E4F1-203ENST00000563643 KIF3CO14782 793 aa26.27■■□□□ 1.8
E4F1-203ENST00000563643 NLRP2Q9NX02 1062 aa26.27■■□□□ 1.8
E4F1-203ENST00000563643 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
E4F1-203ENST00000563643 ERBB3P21860 1342 aa26.26■■□□□ 1.79
E4F1-203ENST00000563643 TTC21BQ7Z4L5 1316 aa26.25■■□□□ 1.79
E4F1-203ENST00000563643 MSH5O43196 834 aa26.25■■□□□ 1.79
E4F1-203ENST00000563643 DNAJC5GQ8N7S2 189 aa26.25■■□□□ 1.79
E4F1-203ENST00000563643 CD2APQ9Y5K6 639 aa26.24■■□□□ 1.79
E4F1-203ENST00000563643 MSL1Q68DK7 614 aa26.23■■□□□ 1.79
E4F1-203ENST00000563643 KIAA1210Q9ULL0 1709 aa26.22■■□□□ 1.79
E4F1-203ENST00000563643 CAPN15O75808 1086 aa26.22■■□□□ 1.79
E4F1-203ENST00000563643 COL23A1Q86Y22 540 aaPredicted RBP26.22■■□□□ 1.79
E4F1-203ENST00000563643 KAT6BQ8WYB5 2073 aa26.22■■□□□ 1.79
E4F1-203ENST00000563643 NBPF1Q3BBV0 1214 aa26.21■■□□□ 1.79
E4F1-203ENST00000563643 TTC21AQ8NDW8 1320 aa26.2■■□□□ 1.79
E4F1-203ENST00000563643 COL13A1Q5TAT6 717 aaPredicted RBP26.2■■□□□ 1.78
E4F1-203ENST00000563643 SYTL4Q96C24 671 aaPredicted RBP26.19■■□□□ 1.78
E4F1-203ENST00000563643 DDX54Q8TDD1 881 aaKnown RBP26.17■■□□□ 1.78
E4F1-203ENST00000563643 ZNF692Q9BU19 519 aaPredicted RBP26.17■■□□□ 1.78
E4F1-203ENST00000563643 CCNL1Q9UK58 526 aaPredicted RBP26.17■■□□□ 1.78
E4F1-203ENST00000563643 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
E4F1-203ENST00000563643 LY75O60449 1722 aa26.16■■□□□ 1.78
E4F1-203ENST00000563643 PRIM1P49642 420 aaKnown RBP26.15■■□□□ 1.78
E4F1-203ENST00000563643 NSD2O96028 1365 aa26.15■■□□□ 1.78
E4F1-203ENST00000563643 ANKRD36BQ8N2N9 1353 aa26.15■■□□□ 1.78
E4F1-203ENST00000563643 ANKRD24Q8TF21 1146 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms