RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
NSMCE1-204ENST00000563273 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
NSMCE1-204ENST00000563273 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
NSMCE1-204ENST00000563273 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
NSMCE1-204ENST00000563273 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
NSMCE1-204ENST00000563273 COL18A1P39060 1754 aa17.1■□□□□ 0.33
NSMCE1-204ENST00000563273 C11orf95C9JLR9 678 aaPredicted RBP17.09■□□□□ 0.33
NSMCE1-204ENST00000563273 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
NSMCE1-204ENST00000563273 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
NSMCE1-204ENST00000563273 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
NSMCE1-204ENST00000563273 FAM196AQ6ZSG2 479 aa17.08■□□□□ 0.32
NSMCE1-204ENST00000563273 CDCA7Q9BWT1 371 aaPredicted RBP17.08■□□□□ 0.32
NSMCE1-204ENST00000563273 DISP2A7MBM2 1401 aa17.07■□□□□ 0.32
NSMCE1-204ENST00000563273 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
NSMCE1-204ENST00000563273 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
NSMCE1-204ENST00000563273 SOX12O15370 315 aa17.06■□□□□ 0.32
NSMCE1-204ENST00000563273 BAG6P46379 1132 aa17.06■□□□□ 0.32
NSMCE1-204ENST00000563273 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
NSMCE1-204ENST00000563273 COG3Q96JB2 828 aa17.05■□□□□ 0.32
NSMCE1-204ENST00000563273 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
NSMCE1-204ENST00000563273 ERBB3P21860 1342 aa17.03■□□□□ 0.32
NSMCE1-204ENST00000563273 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
NSMCE1-204ENST00000563273 PARP4Q9UKK3 1724 aaKnown RBP17.03■□□□□ 0.32
NSMCE1-204ENST00000563273 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
NSMCE1-204ENST00000563273 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
NSMCE1-204ENST00000563273 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
NSMCE1-204ENST00000563273 FYB1O15117 783 aa17.01■□□□□ 0.31
NSMCE1-204ENST00000563273 DDB1Q16531 1140 aa17.01■□□□□ 0.31
NSMCE1-204ENST00000563273 IP6K1Q92551 441 aa17.01■□□□□ 0.31
NSMCE1-204ENST00000563273 BCL9O00512 1426 aa17.01■□□□□ 0.31
NSMCE1-204ENST00000563273 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
NSMCE1-204ENST00000563273 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
NSMCE1-204ENST00000563273 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
NSMCE1-204ENST00000563273 TRIM37O94972 964 aa16.98■□□□□ 0.31
NSMCE1-204ENST00000563273 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
NSMCE1-204ENST00000563273 RTL1A6NKG5 1358 aa16.98■□□□□ 0.31
NSMCE1-204ENST00000563273 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
NSMCE1-204ENST00000563273 HSPA5P11021 654 aaKnown RBP16.97■□□□□ 0.31
NSMCE1-204ENST00000563273 LRRC37A3O60309 1634 aa16.96■□□□□ 0.31
NSMCE1-204ENST00000563273 CARD14Q9BXL6 1004 aa16.96■□□□□ 0.31
NSMCE1-204ENST00000563273 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
NSMCE1-204ENST00000563273 HOXC9P31274 260 aa16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
NSMCE1-204ENST00000563273 MYOM1P52179 1685 aa16.94■□□□□ 0.3
NSMCE1-204ENST00000563273 PEAK1Q9H792 1746 aa16.94■□□□□ 0.3
NSMCE1-204ENST00000563273 EXOC5O00471 708 aa16.94■□□□□ 0.3
NSMCE1-204ENST00000563273 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
NSMCE1-204ENST00000563273 LTN1O94822 1766 aa16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 APBA3O96018 575 aa16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 IL2RBP14784 551 aa16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 AMPHP49418 695 aa16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 MARCH10Q8NA82 808 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
NSMCE1-204ENST00000563273 SRCAPQ6ZRS2 3230 aa16.92■□□□□ 0.3
NSMCE1-204ENST00000563273 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
NSMCE1-204ENST00000563273 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
NSMCE1-204ENST00000563273 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
NSMCE1-204ENST00000563273 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
NSMCE1-204ENST00000563273 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
NSMCE1-204ENST00000563273 PLSCR1O15162 318 aa16.89■□□□□ 0.29
NSMCE1-204ENST00000563273 FBLN1P23142 703 aa16.89■□□□□ 0.29
NSMCE1-204ENST00000563273 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
NSMCE1-204ENST00000563273 INSRP06213 1382 aa16.89■□□□□ 0.29
NSMCE1-204ENST00000563273 FLT4P35916 1363 aa16.89■□□□□ 0.29
NSMCE1-204ENST00000563273 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
NSMCE1-204ENST00000563273 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
NSMCE1-204ENST00000563273 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
NSMCE1-204ENST00000563273 NSD2O96028 1365 aa16.86■□□□□ 0.29
NSMCE1-204ENST00000563273 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
NSMCE1-204ENST00000563273 PANK3Q9H999 370 aa16.84■□□□□ 0.29
NSMCE1-204ENST00000563273 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
NSMCE1-204ENST00000563273 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
NSMCE1-204ENST00000563273 HSP90AB2PQ58FF8 381 aa16.83■□□□□ 0.28
NSMCE1-204ENST00000563273 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
NSMCE1-204ENST00000563273 RREB1Q92766 1687 aa16.83■□□□□ 0.28
NSMCE1-204ENST00000563273 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
NSMCE1-204ENST00000563273 WASHC2AQ641Q2 1341 aa16.82■□□□□ 0.28
NSMCE1-204ENST00000563273 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
NSMCE1-204ENST00000563273 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
NSMCE1-204ENST00000563273 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
NSMCE1-204ENST00000563273 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 MEGF6O75095 1541 aa16.8■□□□□ 0.28
NSMCE1-204ENST00000563273 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
NSMCE1-204ENST00000563273 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
NSMCE1-204ENST00000563273 KIF7Q2M1P5 1343 aa16.78■□□□□ 0.28
NSMCE1-204ENST00000563273 KCNQ2O43526 872 aa16.78■□□□□ 0.28
NSMCE1-204ENST00000563273 PROM2Q8N271 834 aa16.78■□□□□ 0.28
NSMCE1-204ENST00000563273 NHSQ6T4R5 1651 aa16.78■□□□□ 0.28
NSMCE1-204ENST00000563273 LRP5O75197 1615 aa16.78■□□□□ 0.28
NSMCE1-204ENST00000563273 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms