RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 COG3Q96JB2 828 aa12.33□□□□□ -0.44
CYLD-204ENST00000562884 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
CYLD-204ENST00000562884 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
CYLD-204ENST00000562884 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
CYLD-204ENST00000562884 LTN1O94822 1766 aa12.32□□□□□ -0.44
CYLD-204ENST00000562884 NFAT5O94916 1531 aa12.32□□□□□ -0.44
CYLD-204ENST00000562884 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
CYLD-204ENST00000562884 COL5A2P05997 1499 aaPredicted RBP12.31□□□□□ -0.44
CYLD-204ENST00000562884 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
CYLD-204ENST00000562884 CRB1P82279 1406 aa12.3□□□□□ -0.44
CYLD-204ENST00000562884 MYOM1P52179 1685 aa12.3□□□□□ -0.44
CYLD-204ENST00000562884 SOX12O15370 315 aa12.3□□□□□ -0.44
CYLD-204ENST00000562884 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
CYLD-204ENST00000562884 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 THSD7AQ9UPZ6 1657 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
CYLD-204ENST00000562884 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
CYLD-204ENST00000562884 EP400Q96L91 3159 aa12.28□□□□□ -0.44
CYLD-204ENST00000562884 FYB1O15117 783 aa12.28□□□□□ -0.44
CYLD-204ENST00000562884 CSB-PGBD3P0DP91 1061 aa12.28□□□□□ -0.44
CYLD-204ENST00000562884 CDCA7Q9BWT1 371 aaPredicted RBP12.28□□□□□ -0.44
CYLD-204ENST00000562884 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
CYLD-204ENST00000562884 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CYLD-204ENST00000562884 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
CYLD-204ENST00000562884 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
CYLD-204ENST00000562884 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
CYLD-204ENST00000562884 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
CYLD-204ENST00000562884 IP6K1Q92551 441 aa12.26□□□□□ -0.45
CYLD-204ENST00000562884 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
CYLD-204ENST00000562884 CCDC7Q96M83 1385 aa12.26□□□□□ -0.45
CYLD-204ENST00000562884 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
CYLD-204ENST00000562884 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
CYLD-204ENST00000562884 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
CYLD-204ENST00000562884 NSD3Q9BZ95 1437 aa12.25□□□□□ -0.45
CYLD-204ENST00000562884 FAM208AQ9UK61 1670 aaKnown RBP12.25□□□□□ -0.45
CYLD-204ENST00000562884 ERBB3P21860 1342 aa12.24□□□□□ -0.45
CYLD-204ENST00000562884 AMPHP49418 695 aa12.24□□□□□ -0.45
CYLD-204ENST00000562884 CARD14Q9BXL6 1004 aa12.24□□□□□ -0.45
CYLD-204ENST00000562884 WNK3Q9BYP7 1800 aa12.24□□□□□ -0.45
CYLD-204ENST00000562884 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
CYLD-204ENST00000562884 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
CYLD-204ENST00000562884 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
CYLD-204ENST00000562884 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
CYLD-204ENST00000562884 KIF24Q5T7B8 1368 aa12.23□□□□□ -0.45
CYLD-204ENST00000562884 ANKRD24Q8TF21 1146 aa12.23□□□□□ -0.45
CYLD-204ENST00000562884 KAT6BQ8WYB5 2073 aa12.23□□□□□ -0.45
CYLD-204ENST00000562884 DDB1Q16531 1140 aa12.22□□□□□ -0.45
CYLD-204ENST00000562884 PANK3Q9H999 370 aa12.22□□□□□ -0.45
CYLD-204ENST00000562884 NLRP2Q9NX02 1062 aa12.22□□□□□ -0.45
CYLD-204ENST00000562884 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
CYLD-204ENST00000562884 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
CYLD-204ENST00000562884 EXOC5O00471 708 aa12.21□□□□□ -0.45
CYLD-204ENST00000562884 HOXC9P31274 260 aa12.21□□□□□ -0.45
CYLD-204ENST00000562884 NSD2O96028 1365 aa12.2□□□□□ -0.46
CYLD-204ENST00000562884 BAG6P46379 1132 aa12.2□□□□□ -0.46
CYLD-204ENST00000562884 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
CYLD-204ENST00000562884 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
CYLD-204ENST00000562884 FLT4P35916 1363 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 KIF7Q2M1P5 1343 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 IL2RBP14784 551 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
CYLD-204ENST00000562884 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
CYLD-204ENST00000562884 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 INSRP06213 1382 aa12.18□□□□□ -0.46
CYLD-204ENST00000562884 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
CYLD-204ENST00000562884 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
CYLD-204ENST00000562884 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
CYLD-204ENST00000562884 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
CYLD-204ENST00000562884 RGPD2P0DJD1 1756 aa12.16□□□□□ -0.46
CYLD-204ENST00000562884 FBLN1P23142 703 aa12.16□□□□□ -0.46
CYLD-204ENST00000562884 BCL9O00512 1426 aa12.16□□□□□ -0.46
CYLD-204ENST00000562884 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
CYLD-204ENST00000562884 TRIM37O94972 964 aa12.15□□□□□ -0.46
CYLD-204ENST00000562884 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
CYLD-204ENST00000562884 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
CYLD-204ENST00000562884 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
CYLD-204ENST00000562884 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
CYLD-204ENST00000562884 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
CYLD-204ENST00000562884 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
CYLD-204ENST00000562884 APBA3O96018 575 aa12.13□□□□□ -0.47
CYLD-204ENST00000562884 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
CYLD-204ENST00000562884 DEFB132Q7Z7B7 95 aa12.13□□□□□ -0.47
CYLD-204ENST00000562884 MARCH10Q8NA82 808 aaPredicted RBP12.13□□□□□ -0.47
CYLD-204ENST00000562884 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
CYLD-204ENST00000562884 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
CYLD-204ENST00000562884 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
CYLD-204ENST00000562884 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
CYLD-204ENST00000562884 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
CYLD-204ENST00000562884 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
CYLD-204ENST00000562884 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
CYLD-204ENST00000562884 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
CYLD-204ENST00000562884 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
CYLD-204ENST00000562884 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
CYLD-204ENST00000562884 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
CYLD-204ENST00000562884 PLSCR1O15162 318 aa12.1□□□□□ -0.47
CYLD-204ENST00000562884 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms