RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 ACIN1Q9UKV3 1341 aaKnown RBP10.31□□□□□ -0.76
CHD9-205ENST00000562785 CDV3Q9UKY7 258 aaKnown RBP10.3□□□□□ -0.76
CHD9-205ENST00000562785 PDIA4P13667 645 aaKnown RBP10.29□□□□□ -0.76
CHD9-205ENST00000562785 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
CHD9-205ENST00000562785 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
CHD9-205ENST00000562785 PLPP7Q8NBV4 271 aa10.29□□□□□ -0.76
CHD9-205ENST00000562785 LZTS3O60299 673 aaPredicted RBP10.28□□□□□ -0.76
CHD9-205ENST00000562785 ATG7O95352 703 aa10.28□□□□□ -0.76
CHD9-205ENST00000562785 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
CHD9-205ENST00000562785 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
CHD9-205ENST00000562785 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
CHD9-205ENST00000562785 ESPNB1AK53 854 aa10.27□□□□□ -0.77
CHD9-205ENST00000562785 GIGYF1O75420 1035 aaPredicted RBP10.27□□□□□ -0.77
CHD9-205ENST00000562785 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
CHD9-205ENST00000562785 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
CHD9-205ENST00000562785 VRTNQ9H8Y1 702 aa10.27□□□□□ -0.77
CHD9-205ENST00000562785 CD2BP2O95400 341 aaKnown RBP10.26□□□□□ -0.77
CHD9-205ENST00000562785 NCOA4Q13772 614 aa10.26□□□□□ -0.77
CHD9-205ENST00000562785 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
CHD9-205ENST00000562785 LIAT1Q6ZQX7 453 aa10.26□□□□□ -0.77
CHD9-205ENST00000562785 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
CHD9-205ENST00000562785 MAP4K5Q9Y4K4 846 aa10.26□□□□□ -0.77
CHD9-205ENST00000562785 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
CHD9-205ENST00000562785 DEPDC4Q8N2C3 294 aa10.25□□□□□ -0.77
CHD9-205ENST00000562785 CDCA8Q53HL2 280 aa10.24□□□□□ -0.77
CHD9-205ENST00000562785 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
CHD9-205ENST00000562785 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
CHD9-205ENST00000562785 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
CHD9-205ENST00000562785 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
CHD9-205ENST00000562785 PDE4CQ08493 712 aa10.23□□□□□ -0.77
CHD9-205ENST00000562785 ELOAQ14241 798 aaKnown RBP10.23□□□□□ -0.77
CHD9-205ENST00000562785 EML3Q32P44 896 aa10.23□□□□□ -0.77
CHD9-205ENST00000562785 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
CHD9-205ENST00000562785 MKRN1Q9UHC7 482 aaKnown RBP10.23□□□□□ -0.77
CHD9-205ENST00000562785 ATP5J2-PTCD1G3V325 749 aa10.22□□□□□ -0.77
CHD9-205ENST00000562785 CSB-PGBD3P0DP91 1061 aa10.22□□□□□ -0.77
CHD9-205ENST00000562785 TSGA10IPQ3SY00 556 aa10.22□□□□□ -0.77
CHD9-205ENST00000562785 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
CHD9-205ENST00000562785 FAM196BA6NMK8 535 aa10.21□□□□□ -0.77
CHD9-205ENST00000562785 SLC19A1P41440 591 aa10.21□□□□□ -0.77
CHD9-205ENST00000562785 VASH1Q7L8A9 365 aaPredicted RBP10.21□□□□□ -0.77
CHD9-205ENST00000562785 MPNDQ8N594 471 aa10.21□□□□□ -0.77
CHD9-205ENST00000562785 CDK15Q96Q40 435 aa10.21□□□□□ -0.77
CHD9-205ENST00000562785 A0A0G2JS52 829 aa10.2□□□□□ -0.78
CHD9-205ENST00000562785 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L21D6R901 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 CRTC2Q53ET0 693 aaPredicted RBP10.19□□□□□ -0.78
CHD9-205ENST00000562785 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 INTS6LQ5JSJ4 861 aaKnown RBP10.19□□□□□ -0.78
CHD9-205ENST00000562785 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 ZMIZ1Q9ULJ6 1067 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
CHD9-205ENST00000562785 WNT7AO00755 349 aa10.18□□□□□ -0.78
CHD9-205ENST00000562785 SIAH2O43255 324 aa10.18□□□□□ -0.78
CHD9-205ENST00000562785 TRIM50Q86XT4 487 aa10.18□□□□□ -0.78
CHD9-205ENST00000562785 CDCA7Q9BWT1 371 aaPredicted RBP10.18□□□□□ -0.78
CHD9-205ENST00000562785 PCDHB11Q9Y5F2 797 aa10.18□□□□□ -0.78
CHD9-205ENST00000562785 TMEM88BA6NKF7 163 aa10.17□□□□□ -0.78
CHD9-205ENST00000562785 RASA1P20936 1047 aa10.17□□□□□ -0.78
CHD9-205ENST00000562785 PTK7Q13308 1070 aa10.17□□□□□ -0.78
CHD9-205ENST00000562785 SPRYD7Q5W111 196 aa10.17□□□□□ -0.78
CHD9-205ENST00000562785 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
CHD9-205ENST00000562785 NOVA2Q9UNW9 492 aaKnown RBP10.17□□□□□ -0.78
CHD9-205ENST00000562785 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
CHD9-205ENST00000562785 ATP1A2P50993 1020 aa10.16□□□□□ -0.78
CHD9-205ENST00000562785 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
CHD9-205ENST00000562785 FSHRP23945 695 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 GRM5P41594 1212 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 RAB15P59190 212 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 CLDN10P78369 228 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 ARID5BQ14865 1188 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 STK32AQ8WU08 396 aa10.15□□□□□ -0.78
CHD9-205ENST00000562785 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 ADH1CP00326 375 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 TRIM26Q12899 539 aaPredicted RBP10.14□□□□□ -0.79
CHD9-205ENST00000562785 USP4Q13107 963 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 TMEM164Q5U3C3 297 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
CHD9-205ENST00000562785 GTF2IP78347 998 aa10.13□□□□□ -0.79
CHD9-205ENST00000562785 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
CHD9-205ENST00000562785 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
CHD9-205ENST00000562785 SIX5Q8N196 739 aa10.13□□□□□ -0.79
CHD9-205ENST00000562785 LARGE2Q8N3Y3 721 aa10.13□□□□□ -0.79
CHD9-205ENST00000562785 DNAAF2Q9NVR5 837 aaKnown RBP10.13□□□□□ -0.79
CHD9-205ENST00000562785 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
CHD9-205ENST00000562785 ANKMY2Q8IV38 441 aa10.12□□□□□ -0.79
CHD9-205ENST00000562785 KIAA1024Q9UPX6 916 aa10.12□□□□□ -0.79
CHD9-205ENST00000562785 PCDHGA11Q9Y5H2 935 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms