RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.36
CDH11-204ENST00000562712 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
CDH11-204ENST00000562712 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDH11-204ENST00000562712 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
CDH11-204ENST00000562712 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
CDH11-204ENST00000562712 KIF24Q5T7B8 1368 aa17.3■□□□□ 0.36
CDH11-204ENST00000562712 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
CDH11-204ENST00000562712 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
CDH11-204ENST00000562712 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
CDH11-204ENST00000562712 IP6K1Q92551 441 aa17.3■□□□□ 0.36
CDH11-204ENST00000562712 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
CDH11-204ENST00000562712 ZBTB7CA1YPR0 619 aa17.29■□□□□ 0.36
CDH11-204ENST00000562712 RALBP1Q15311 655 aa17.29■□□□□ 0.36
CDH11-204ENST00000562712 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
CDH11-204ENST00000562712 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
CDH11-204ENST00000562712 AXIN2Q9Y2T1 843 aa17.29■□□□□ 0.36
CDH11-204ENST00000562712 EP400Q96L91 3159 aa17.28■□□□□ 0.36
CDH11-204ENST00000562712 AMPHP49418 695 aa17.28■□□□□ 0.36
CDH11-204ENST00000562712 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
CDH11-204ENST00000562712 ABCC6O95255 1503 aa17.27■□□□□ 0.36
CDH11-204ENST00000562712 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
CDH11-204ENST00000562712 HOXC9P31274 260 aa17.27■□□□□ 0.36
CDH11-204ENST00000562712 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
CDH11-204ENST00000562712 LTN1O94822 1766 aa17.27■□□□□ 0.35
CDH11-204ENST00000562712 COL18A1P39060 1754 aa17.27■□□□□ 0.35
CDH11-204ENST00000562712 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
CDH11-204ENST00000562712 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
CDH11-204ENST00000562712 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
CDH11-204ENST00000562712 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
CDH11-204ENST00000562712 MTHFSP49914 203 aa17.25■□□□□ 0.35
CDH11-204ENST00000562712 EVA1CP58658 441 aa17.25■□□□□ 0.35
CDH11-204ENST00000562712 VPS72Q15906 364 aa17.25■□□□□ 0.35
CDH11-204ENST00000562712 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CDH11-204ENST00000562712 FLT4P35916 1363 aa17.25■□□□□ 0.35
CDH11-204ENST00000562712 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
CDH11-204ENST00000562712 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
CDH11-204ENST00000562712 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
CDH11-204ENST00000562712 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
CDH11-204ENST00000562712 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
CDH11-204ENST00000562712 INSRP06213 1382 aa17.23■□□□□ 0.35
CDH11-204ENST00000562712 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
CDH11-204ENST00000562712 ANP32CO43423 234 aa17.21■□□□□ 0.35
CDH11-204ENST00000562712 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
CDH11-204ENST00000562712 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
CDH11-204ENST00000562712 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
CDH11-204ENST00000562712 ERBB3P21860 1342 aa17.21■□□□□ 0.34
CDH11-204ENST00000562712 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
CDH11-204ENST00000562712 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
CDH11-204ENST00000562712 LARP1Q6PKG0 1096 aaKnown RBP17.2■□□□□ 0.34
CDH11-204ENST00000562712 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
CDH11-204ENST00000562712 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
CDH11-204ENST00000562712 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
CDH11-204ENST00000562712 CRB1P82279 1406 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 TOM1L2Q6ZVM7 507 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
CDH11-204ENST00000562712 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
CDH11-204ENST00000562712 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
CDH11-204ENST00000562712 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
CDH11-204ENST00000562712 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
CDH11-204ENST00000562712 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
CDH11-204ENST00000562712 SPATA31A1Q5TZJ5 1347 aa17.16■□□□□ 0.34
CDH11-204ENST00000562712 IL13P35225 146 aa17.15■□□□□ 0.34
CDH11-204ENST00000562712 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
CDH11-204ENST00000562712 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
CDH11-204ENST00000562712 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
CDH11-204ENST00000562712 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.33
CDH11-204ENST00000562712 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
CDH11-204ENST00000562712 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
CDH11-204ENST00000562712 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
CDH11-204ENST00000562712 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
CDH11-204ENST00000562712 BARGINQ6ZT62 677 aa17.12■□□□□ 0.33
CDH11-204ENST00000562712 EYA1Q99502 592 aa17.12■□□□□ 0.33
CDH11-204ENST00000562712 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
CDH11-204ENST00000562712 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
CDH11-204ENST00000562712 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
CDH11-204ENST00000562712 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
CDH11-204ENST00000562712 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
CDH11-204ENST00000562712 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
CDH11-204ENST00000562712 COL3A1P02461 1466 aaPredicted RBP17.1■□□□□ 0.33
CDH11-204ENST00000562712 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
CDH11-204ENST00000562712 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
CDH11-204ENST00000562712 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
CDH11-204ENST00000562712 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
CDH11-204ENST00000562712 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
CDH11-204ENST00000562712 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CDH11-204ENST00000562712 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
CDH11-204ENST00000562712 A0A0G2JS52 829 aa17.06■□□□□ 0.32
CDH11-204ENST00000562712 IL2RBP14784 551 aa17.06■□□□□ 0.32
CDH11-204ENST00000562712 MYT1Q01538 1121 aa17.06■□□□□ 0.32
CDH11-204ENST00000562712 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
CDH11-204ENST00000562712 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
CDH11-204ENST00000562712 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
CDH11-204ENST00000562712 KDRP35968 1356 aa17.04■□□□□ 0.32
CDH11-204ENST00000562712 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
CDH11-204ENST00000562712 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
CDH11-204ENST00000562712 EXOC5O00471 708 aa17.02■□□□□ 0.32
CDH11-204ENST00000562712 FCHSD2O94868 740 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms