RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
NIP7-204ENST00000562523 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
NIP7-204ENST00000562523 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
NIP7-204ENST00000562523 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
NIP7-204ENST00000562523 BAZ1AQ9NRL2 1556 aaPredicted RBP8.33□□□□□ -1.08
NIP7-204ENST00000562523 POLR3EQ9NVU0 708 aa8.33□□□□□ -1.08
NIP7-204ENST00000562523 PPFIA3O75145 1194 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 VSIG8P0DPA2 414 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
NIP7-204ENST00000562523 C1QTNF2Q9BXJ5 285 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
NIP7-204ENST00000562523 CLK2P49760 499 aaKnown RBP8.31□□□□□ -1.08
NIP7-204ENST00000562523 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
NIP7-204ENST00000562523 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
NIP7-204ENST00000562523 MAP4K5Q9Y4K4 846 aa8.31□□□□□ -1.08
NIP7-204ENST00000562523 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
NIP7-204ENST00000562523 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
NIP7-204ENST00000562523 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
NIP7-204ENST00000562523 DNMT3LQ9UJW3 386 aa8.3□□□□□ -1.08
NIP7-204ENST00000562523 ATP1B4Q9UN42 357 aaPredicted RBP8.3□□□□□ -1.08
NIP7-204ENST00000562523 MRC2Q9UBG0 1479 aa8.3□□□□□ -1.08
NIP7-204ENST00000562523 PEG3Q9GZU2 1588 aa8.3□□□□□ -1.08
NIP7-204ENST00000562523 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
NIP7-204ENST00000562523 FIGNL2A6NMB9 653 aa8.28□□□□□ -1.08
NIP7-204ENST00000562523 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
NIP7-204ENST00000562523 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.28□□□□□ -1.08
NIP7-204ENST00000562523 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
NIP7-204ENST00000562523 SLC24A1O60721 1099 aa8.27□□□□□ -1.09
NIP7-204ENST00000562523 ERFEQ4G0M1 354 aa8.27□□□□□ -1.09
NIP7-204ENST00000562523 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
NIP7-204ENST00000562523 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
NIP7-204ENST00000562523 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
NIP7-204ENST00000562523 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
NIP7-204ENST00000562523 WDR62O43379 1518 aa8.25□□□□□ -1.09
NIP7-204ENST00000562523 CBLBQ13191 982 aa8.25□□□□□ -1.09
NIP7-204ENST00000562523 ZBTB33Q86T24 672 aa8.25□□□□□ -1.09
NIP7-204ENST00000562523 PTSQ03393 145 aa8.24□□□□□ -1.09
NIP7-204ENST00000562523 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
NIP7-204ENST00000562523 KCTD15Q96SI1 283 aaPredicted RBP8.24□□□□□ -1.09
NIP7-204ENST00000562523 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 MROH2BQ7Z745 1585 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 LRRN4Q8WUT4 740 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 CNTNAP3BQ96NU0 1288 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 CNTNAP3Q9BZ76 1288 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 FKBPLQ9UIM3 349 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
NIP7-204ENST00000562523 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
NIP7-204ENST00000562523 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
NIP7-204ENST00000562523 Q6ZVU0 165 aa8.21□□□□□ -1.1
NIP7-204ENST00000562523 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
NIP7-204ENST00000562523 RIMBP3CA6NJZ7 1639 aa8.21□□□□□ -1.1
NIP7-204ENST00000562523 RIMBP3BA6NNM3 1639 aa8.21□□□□□ -1.1
NIP7-204ENST00000562523 RIMBP3Q9UFD9 1639 aa8.21□□□□□ -1.1
NIP7-204ENST00000562523 SPINT1O43278 529 aa8.2□□□□□ -1.1
NIP7-204ENST00000562523 RELBQ01201 579 aa8.2□□□□□ -1.1
NIP7-204ENST00000562523 NR6A1Q15406 480 aa8.2□□□□□ -1.1
NIP7-204ENST00000562523 CCDC155Q8N6L0 562 aa8.2□□□□□ -1.1
NIP7-204ENST00000562523 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
NIP7-204ENST00000562523 WIZO95785 1651 aa8.19□□□□□ -1.1
NIP7-204ENST00000562523 PTK2Q05397 1052 aa8.19□□□□□ -1.1
NIP7-204ENST00000562523 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
NIP7-204ENST00000562523 COL25A1Q9BXS0 654 aaPredicted RBP8.19□□□□□ -1.1
NIP7-204ENST00000562523 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
NIP7-204ENST00000562523 KRT76Q01546 638 aa8.18□□□□□ -1.1
NIP7-204ENST00000562523 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
NIP7-204ENST00000562523 POLMQ9NP87 494 aaPredicted RBP8.18□□□□□ -1.1
NIP7-204ENST00000562523 AP1G2O75843 785 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 CTSOP43234 321 aaPredicted RBP8.17□□□□□ -1.1
NIP7-204ENST00000562523 RAB15P59190 212 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
NIP7-204ENST00000562523 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 KCTD17Q8N5Z5 321 aa8.17□□□□□ -1.1
NIP7-204ENST00000562523 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
NIP7-204ENST00000562523 CDC14CA4D256 554 aa8.16□□□□□ -1.1
NIP7-204ENST00000562523 ARHGEF11O15085 1522 aa8.16□□□□□ -1.1
NIP7-204ENST00000562523 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
NIP7-204ENST00000562523 ZNF395Q9H8N7 513 aaPredicted RBP8.16□□□□□ -1.1
NIP7-204ENST00000562523 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
NIP7-204ENST00000562523 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
NIP7-204ENST00000562523 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
NIP7-204ENST00000562523 ADAM32Q8TC27 787 aa8.15□□□□□ -1.1
NIP7-204ENST00000562523 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.1
NIP7-204ENST00000562523 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.1
NIP7-204ENST00000562523 ITGA6P23229 1130 aa8.14□□□□□ -1.11
NIP7-204ENST00000562523 FBXO31Q5XUX0 539 aaPredicted RBP8.14□□□□□ -1.11
NIP7-204ENST00000562523 SV2AQ7L0J3 742 aa8.14□□□□□ -1.11
NIP7-204ENST00000562523 PNMA1Q8ND90 353 aa8.14□□□□□ -1.11
NIP7-204ENST00000562523 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
NIP7-204ENST00000562523 GDF11O95390 407 aa8.13□□□□□ -1.11
NIP7-204ENST00000562523 NBPF20Q3BBV1 942 aa8.13□□□□□ -1.11
NIP7-204ENST00000562523 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
NIP7-204ENST00000562523 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
NIP7-204ENST00000562523 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
NIP7-204ENST00000562523 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
NIP7-204ENST00000562523 GPSM3Q9Y4H4 160 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms