RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 AXIN2Q9Y2T1 843 aa15.47■□□□□ 0.07
TSC2-218ENST00000562474 COL5A2P05997 1499 aaPredicted RBP15.46■□□□□ 0.07
TSC2-218ENST00000562474 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
TSC2-218ENST00000562474 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
TSC2-218ENST00000562474 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
TSC2-218ENST00000562474 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
TSC2-218ENST00000562474 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
TSC2-218ENST00000562474 LARP1Q6PKG0 1096 aaKnown RBP15.45■□□□□ 0.06
TSC2-218ENST00000562474 KCNH5Q8NCM2 988 aa15.45■□□□□ 0.06
TSC2-218ENST00000562474 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
TSC2-218ENST00000562474 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
TSC2-218ENST00000562474 EVA1CP58658 441 aa15.44■□□□□ 0.06
TSC2-218ENST00000562474 VPS72Q15906 364 aa15.44■□□□□ 0.06
TSC2-218ENST00000562474 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
TSC2-218ENST00000562474 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
TSC2-218ENST00000562474 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
TSC2-218ENST00000562474 A0A0G2JS52 829 aa15.43■□□□□ 0.06
TSC2-218ENST00000562474 MYT1Q01538 1121 aa15.43■□□□□ 0.06
TSC2-218ENST00000562474 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
TSC2-218ENST00000562474 FAM98CQ17RN3 349 aaKnown RBP15.42■□□□□ 0.06
TSC2-218ENST00000562474 KAT6BQ8WYB5 2073 aa15.41■□□□□ 0.06
TSC2-218ENST00000562474 THSD7AQ9UPZ6 1657 aa15.41■□□□□ 0.06
TSC2-218ENST00000562474 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
TSC2-218ENST00000562474 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
TSC2-218ENST00000562474 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
TSC2-218ENST00000562474 CC2D1BQ5T0F9 858 aaKnown RBP15.4■□□□□ 0.06
TSC2-218ENST00000562474 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
TSC2-218ENST00000562474 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
TSC2-218ENST00000562474 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
TSC2-218ENST00000562474 AMPHP49418 695 aa15.39■□□□□ 0.05
TSC2-218ENST00000562474 SPATA31A1Q5TZJ5 1347 aa15.39■□□□□ 0.05
TSC2-218ENST00000562474 CDK12Q9NYV4 1490 aaPredicted RBP15.39■□□□□ 0.05
TSC2-218ENST00000562474 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
TSC2-218ENST00000562474 ABCC6O95255 1503 aa15.38■□□□□ 0.05
TSC2-218ENST00000562474 TOM1L2Q6ZVM7 507 aa15.38■□□□□ 0.05
TSC2-218ENST00000562474 CRB1P82279 1406 aa15.37■□□□□ 0.05
TSC2-218ENST00000562474 LRRC37A3O60309 1634 aa15.37■□□□□ 0.05
TSC2-218ENST00000562474 HOXC9P31274 260 aa15.37■□□□□ 0.05
TSC2-218ENST00000562474 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
TSC2-218ENST00000562474 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
TSC2-218ENST00000562474 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
TSC2-218ENST00000562474 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
TSC2-218ENST00000562474 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
TSC2-218ENST00000562474 FAM182BQ5T319 152 aa15.36■□□□□ 0.05
TSC2-218ENST00000562474 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
TSC2-218ENST00000562474 IP6K1Q92551 441 aa15.36■□□□□ 0.05
TSC2-218ENST00000562474 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
TSC2-218ENST00000562474 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
TSC2-218ENST00000562474 NLRP2Q9NX02 1062 aa15.35■□□□□ 0.05
TSC2-218ENST00000562474 ERBB3P21860 1342 aa15.35■□□□□ 0.05
TSC2-218ENST00000562474 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
TSC2-218ENST00000562474 NSD2O96028 1365 aa15.34■□□□□ 0.05
TSC2-218ENST00000562474 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
TSC2-218ENST00000562474 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
TSC2-218ENST00000562474 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
TSC2-218ENST00000562474 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
TSC2-218ENST00000562474 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
TSC2-218ENST00000562474 FLT4P35916 1363 aa15.32■□□□□ 0.04
TSC2-218ENST00000562474 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
TSC2-218ENST00000562474 SOCS7O14512 581 aa15.31■□□□□ 0.04
TSC2-218ENST00000562474 SBF2Q86WG5 1849 aa15.31■□□□□ 0.04
TSC2-218ENST00000562474 CARD10Q9BWT7 1032 aa15.29■□□□□ 0.04
TSC2-218ENST00000562474 INSRP06213 1382 aa15.28■□□□□ 0.04
TSC2-218ENST00000562474 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
TSC2-218ENST00000562474 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
TSC2-218ENST00000562474 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
TSC2-218ENST00000562474 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
TSC2-218ENST00000562474 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.04
TSC2-218ENST00000562474 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
TSC2-218ENST00000562474 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
TSC2-218ENST00000562474 MEGF6O75095 1541 aa15.27■□□□□ 0.03
TSC2-218ENST00000562474 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
TSC2-218ENST00000562474 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
TSC2-218ENST00000562474 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
TSC2-218ENST00000562474 MTHFSP49914 203 aa15.24■□□□□ 0.03
TSC2-218ENST00000562474 UPF1Q92900 1129 aaKnown RBP eCLIP15.24■□□□□ 0.03
TSC2-218ENST00000562474 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
TSC2-218ENST00000562474 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
TSC2-218ENST00000562474 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
TSC2-218ENST00000562474 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
TSC2-218ENST00000562474 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
TSC2-218ENST00000562474 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
TSC2-218ENST00000562474 DDB1Q16531 1140 aa15.23■□□□□ 0.03
TSC2-218ENST00000562474 TNS2Q63HR2 1409 aa15.23■□□□□ 0.03
TSC2-218ENST00000562474 KIF24Q5T7B8 1368 aa15.23■□□□□ 0.03
TSC2-218ENST00000562474 IL2RBP14784 551 aa15.22■□□□□ 0.03
TSC2-218ENST00000562474 EYA1Q99502 592 aa15.22■□□□□ 0.03
TSC2-218ENST00000562474 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
TSC2-218ENST00000562474 MARCH10Q8NA82 808 aaPredicted RBP15.21■□□□□ 0.03
TSC2-218ENST00000562474 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
TSC2-218ENST00000562474 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
TSC2-218ENST00000562474 EP400Q96L91 3159 aa15.2■□□□□ 0.02
TSC2-218ENST00000562474 PPP2R1AP30153 589 aa15.19■□□□□ 0.02
TSC2-218ENST00000562474 PTF1AQ7RTS3 328 aa15.19■□□□□ 0.02
TSC2-218ENST00000562474 TOGARAM1Q9Y4F4 1720 aa15.19■□□□□ 0.02
TSC2-218ENST00000562474 ITGB4P16144 1822 aa15.19■□□□□ 0.02
TSC2-218ENST00000562474 BTAF1O14981 1849 aa15.18■□□□□ 0.02
TSC2-218ENST00000562474 EXOC5O00471 708 aa15.18■□□□□ 0.02
TSC2-218ENST00000562474 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
TSC2-218ENST00000562474 OVOS2A0A0G2JMS6 1433 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms