RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 BMP2P12643 396 aa11.99□□□□□ -0.49
LINC01243-201ENST00000562065 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC01243-201ENST00000562065 MAN1A2O60476 641 aa11.98□□□□□ -0.49
LINC01243-201ENST00000562065 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
LINC01243-201ENST00000562065 ZBTB33Q86T24 672 aa11.97□□□□□ -0.49
LINC01243-201ENST00000562065 LINC00528Q8N1L1 170 aa11.97□□□□□ -0.49
LINC01243-201ENST00000562065 IRF7Q92985 503 aa11.97□□□□□ -0.49
LINC01243-201ENST00000562065 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
LINC01243-201ENST00000562065 ZCCHC6Q5VYS8 1495 aaKnown RBP11.96□□□□□ -0.49
LINC01243-201ENST00000562065 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.49
LINC01243-201ENST00000562065 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
LINC01243-201ENST00000562065 MEIOBQ8N635 442 aa11.96□□□□□ -0.49
LINC01243-201ENST00000562065 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
LINC01243-201ENST00000562065 NPAS3Q8IXF0 933 aa11.95□□□□□ -0.5
LINC01243-201ENST00000562065 H3BM21 787 aa11.94□□□□□ -0.5
LINC01243-201ENST00000562065 GMPRP36959 345 aa11.94□□□□□ -0.5
LINC01243-201ENST00000562065 STK17AQ9UEE5 414 aa11.93□□□□□ -0.5
LINC01243-201ENST00000562065 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
LINC01243-201ENST00000562065 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
LINC01243-201ENST00000562065 PTK2Q05397 1052 aa11.91□□□□□ -0.5
LINC01243-201ENST00000562065 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
LINC01243-201ENST00000562065 KCTD15Q96SI1 283 aaPredicted RBP11.91□□□□□ -0.5
LINC01243-201ENST00000562065 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
LINC01243-201ENST00000562065 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
LINC01243-201ENST00000562065 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
LINC01243-201ENST00000562065 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
LINC01243-201ENST00000562065 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
LINC01243-201ENST00000562065 EPS8L1Q8TE68 723 aa11.9□□□□□ -0.5
LINC01243-201ENST00000562065 TSEN34Q9BSV6 310 aaKnown RBP11.9□□□□□ -0.5
LINC01243-201ENST00000562065 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
LINC01243-201ENST00000562065 CBLBQ13191 982 aa11.89□□□□□ -0.51
LINC01243-201ENST00000562065 CDV3Q9UKY7 258 aaKnown RBP11.89□□□□□ -0.51
LINC01243-201ENST00000562065 RFC5P40937 340 aa11.88□□□□□ -0.51
LINC01243-201ENST00000562065 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
LINC01243-201ENST00000562065 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
LINC01243-201ENST00000562065 RAB15P59190 212 aa11.87□□□□□ -0.51
LINC01243-201ENST00000562065 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
LINC01243-201ENST00000562065 DHX9Q08211 1270 aaKnown RBP11.86□□□□□ -0.51
LINC01243-201ENST00000562065 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
LINC01243-201ENST00000562065 DNMT3LQ9UJW3 386 aa11.86□□□□□ -0.51
LINC01243-201ENST00000562065 OCSTAMPQ9BR26 566 aa11.85□□□□□ -0.51
LINC01243-201ENST00000562065 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
LINC01243-201ENST00000562065 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
LINC01243-201ENST00000562065 GPSM3Q9Y4H4 160 aa11.84□□□□□ -0.51
LINC01243-201ENST00000562065 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
LINC01243-201ENST00000562065 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.52
LINC01243-201ENST00000562065 TTLL8A6PVC2 850 aa11.83□□□□□ -0.52
LINC01243-201ENST00000562065 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
LINC01243-201ENST00000562065 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
LINC01243-201ENST00000562065 ZSCAN1Q8NBB4 408 aa11.82□□□□□ -0.52
LINC01243-201ENST00000562065 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
LINC01243-201ENST00000562065 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
LINC01243-201ENST00000562065 AGBL1Q96MI9 1066 aa11.81□□□□□ -0.52
LINC01243-201ENST00000562065 RELBQ01201 579 aa11.8□□□□□ -0.52
LINC01243-201ENST00000562065 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.8□□□□□ -0.52
LINC01243-201ENST00000562065 Q6ZVU0 165 aa11.8□□□□□ -0.52
LINC01243-201ENST00000562065 TMPRSS4Q9NRS4 437 aa11.79□□□□□ -0.52
LINC01243-201ENST00000562065 TMEM259Q4ZIN3 620 aa11.78□□□□□ -0.52
LINC01243-201ENST00000562065 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
LINC01243-201ENST00000562065 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
LINC01243-201ENST00000562065 SPINT1O43278 529 aa11.77□□□□□ -0.53
LINC01243-201ENST00000562065 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
LINC01243-201ENST00000562065 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
LINC01243-201ENST00000562065 POLMQ9NP87 494 aaPredicted RBP11.76□□□□□ -0.53
LINC01243-201ENST00000562065 PTSQ03393 145 aa11.75□□□□□ -0.53
LINC01243-201ENST00000562065 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
LINC01243-201ENST00000562065 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
LINC01243-201ENST00000562065 ZNF395Q9H8N7 513 aaPredicted RBP11.74□□□□□ -0.53
LINC01243-201ENST00000562065 EIF4G1Q04637 1599 aaKnown RBP11.74□□□□□ -0.53
LINC01243-201ENST00000562065 ERVH48-1M5A8F1 160 aa11.73□□□□□ -0.53
LINC01243-201ENST00000562065 CTSOP43234 321 aaPredicted RBP11.73□□□□□ -0.53
LINC01243-201ENST00000562065 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
LINC01243-201ENST00000562065 PCDHB9Q9Y5E1 797 aa11.72□□□□□ -0.53
LINC01243-201ENST00000562065 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
LINC01243-201ENST00000562065 ZBBXA8MT70 800 aa11.7□□□□□ -0.54
LINC01243-201ENST00000562065 ADH1AP07327 375 aa11.7□□□□□ -0.54
LINC01243-201ENST00000562065 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
LINC01243-201ENST00000562065 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
LINC01243-201ENST00000562065 ESPNB1AK53 854 aa11.68□□□□□ -0.54
LINC01243-201ENST00000562065 ADD1P35611 737 aaKnown RBP11.68□□□□□ -0.54
LINC01243-201ENST00000562065 FBXO45P0C2W1 286 aa11.67□□□□□ -0.54
LINC01243-201ENST00000562065 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
LINC01243-201ENST00000562065 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
LINC01243-201ENST00000562065 LILRA1O75019 489 aa11.66□□□□□ -0.54
LINC01243-201ENST00000562065 CDC14CA4D256 554 aa11.65□□□□□ -0.54
LINC01243-201ENST00000562065 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
LINC01243-201ENST00000562065 PTGIRP43119 386 aa11.65□□□□□ -0.54
LINC01243-201ENST00000562065 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
LINC01243-201ENST00000562065 RNF217Q8TC41 542 aa11.65□□□□□ -0.54
LINC01243-201ENST00000562065 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
LINC01243-201ENST00000562065 CNTNAP3BQ96NU0 1288 aa11.64□□□□□ -0.55
LINC01243-201ENST00000562065 CNTNAP3Q9BZ76 1288 aa11.64□□□□□ -0.55
LINC01243-201ENST00000562065 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
LINC01243-201ENST00000562065 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
LINC01243-201ENST00000562065 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
LINC01243-201ENST00000562065 ITGA6P23229 1130 aa11.61□□□□□ -0.55
LINC01243-201ENST00000562065 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
LINC01243-201ENST00000562065 VWA5B2Q8N398 1253 aa11.61□□□□□ -0.55
LINC01243-201ENST00000562065 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
LINC01243-201ENST00000562065 KRT76Q01546 638 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms