RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 LMO7Q8WWI1 1683 aa25.93■■□□□ 1.74
PKD1-223ENST00000561668 BRWD3Q6RI45 1802 aa25.93■■□□□ 1.74
PKD1-223ENST00000561668 CSB-PGBD3P0DP91 1061 aa25.93■■□□□ 1.74
PKD1-223ENST00000561668 AXIN2Q9Y2T1 843 aa25.93■■□□□ 1.74
PKD1-223ENST00000561668 COL5A2P05997 1499 aaPredicted RBP25.92■■□□□ 1.74
PKD1-223ENST00000561668 CRB1P82279 1406 aa25.9■■□□□ 1.74
PKD1-223ENST00000561668 PDE3BQ13370 1112 aa25.9■■□□□ 1.74
PKD1-223ENST00000561668 MYOM1P52179 1685 aa25.88■■□□□ 1.73
PKD1-223ENST00000561668 WDR17Q8IZU2 1322 aa25.88■■□□□ 1.73
PKD1-223ENST00000561668 C11orf95C9JLR9 678 aaPredicted RBP25.87■■□□□ 1.73
PKD1-223ENST00000561668 NFAT5O94916 1531 aa25.86■■□□□ 1.73
PKD1-223ENST00000561668 BLMP54132 1417 aaPredicted RBP25.86■■□□□ 1.73
PKD1-223ENST00000561668 USP54Q70EL1 1684 aa25.86■■□□□ 1.73
PKD1-223ENST00000561668 COL18A1P39060 1754 aa25.84■■□□□ 1.73
PKD1-223ENST00000561668 FYB1O15117 783 aa25.84■■□□□ 1.73
PKD1-223ENST00000561668 FAM182BQ5T319 152 aa25.84■■□□□ 1.73
PKD1-223ENST00000561668 OVOS2A0A0J9YW53 1432 aa25.83■■□□□ 1.73
PKD1-223ENST00000561668 OVOS2Q6IE36 1432 aa25.83■■□□□ 1.73
PKD1-223ENST00000561668 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
PKD1-223ENST00000561668 GGNBP2Q9H3C7 697 aa25.83■■□□□ 1.73
PKD1-223ENST00000561668 THSD7AQ9UPZ6 1657 aa25.83■■□□□ 1.73
PKD1-223ENST00000561668 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
PKD1-223ENST00000561668 CARD10Q9BWT7 1032 aa25.82■■□□□ 1.72
PKD1-223ENST00000561668 AMPHP49418 695 aa25.8■■□□□ 1.72
PKD1-223ENST00000561668 RGPD5Q99666 1765 aa25.79■■□□□ 1.72
PKD1-223ENST00000561668 ABCC6O95255 1503 aa25.79■■□□□ 1.72
PKD1-223ENST00000561668 IP6K1Q92551 441 aa25.79■■□□□ 1.72
PKD1-223ENST00000561668 CARD14Q9BXL6 1004 aa25.79■■□□□ 1.72
PKD1-223ENST00000561668 NLRP2Q9NX02 1062 aa25.79■■□□□ 1.72
PKD1-223ENST00000561668 DDB1Q16531 1140 aa25.78■■□□□ 1.72
PKD1-223ENST00000561668 LTN1O94822 1766 aa25.77■■□□□ 1.72
PKD1-223ENST00000561668 BAG6P46379 1132 aa25.77■■□□□ 1.72
PKD1-223ENST00000561668 ANKRD24Q8TF21 1146 aa25.77■■□□□ 1.72
PKD1-223ENST00000561668 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
PKD1-223ENST00000561668 KIF7Q2M1P5 1343 aa25.76■■□□□ 1.71
PKD1-223ENST00000561668 CCDC7Q96M83 1385 aa25.76■■□□□ 1.71
PKD1-223ENST00000561668 EP400Q96L91 3159 aa25.76■■□□□ 1.71
PKD1-223ENST00000561668 NSD3Q9BZ95 1437 aa25.75■■□□□ 1.71
PKD1-223ENST00000561668 ERBB3P21860 1342 aa25.75■■□□□ 1.71
PKD1-223ENST00000561668 CGNL1Q0VF96 1302 aa25.74■■□□□ 1.71
PKD1-223ENST00000561668 MAP3K19Q56UN5 1328 aa25.74■■□□□ 1.71
PKD1-223ENST00000561668 FBLN1P23142 703 aa25.74■■□□□ 1.71
PKD1-223ENST00000561668 DEFB132Q7Z7B7 95 aa25.74■■□□□ 1.71
PKD1-223ENST00000561668 LTV1Q96GA3 475 aaPredicted RBP25.74■■□□□ 1.71
PKD1-223ENST00000561668 EXOC5O00471 708 aa25.73■■□□□ 1.71
PKD1-223ENST00000561668 TRIM37O94972 964 aa25.72■■□□□ 1.71
PKD1-223ENST00000561668 HOXC9P31274 260 aa25.71■■□□□ 1.71
PKD1-223ENST00000561668 RRS1Q15050 365 aaKnown RBP25.71■■□□□ 1.71
PKD1-223ENST00000561668 PANK3Q9H999 370 aa25.7■■□□□ 1.7
PKD1-223ENST00000561668 PARP4Q9UKK3 1724 aaKnown RBP25.7■■□□□ 1.7
PKD1-223ENST00000561668 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
PKD1-223ENST00000561668 KIF20BQ96Q89 1820 aa25.68■■□□□ 1.7
PKD1-223ENST00000561668 IL2RBP14784 551 aa25.68■■□□□ 1.7
PKD1-223ENST00000561668 APBA3O96018 575 aa25.66■■□□□ 1.7
PKD1-223ENST00000561668 EN1Q05925 392 aaPredicted RBP25.66■■□□□ 1.7
PKD1-223ENST00000561668 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
PKD1-223ENST00000561668 RTL1A6NKG5 1358 aa25.65■■□□□ 1.7
PKD1-223ENST00000561668 OVOS2A0A0G2JMS6 1433 aa25.64■■□□□ 1.7
PKD1-223ENST00000561668 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
PKD1-223ENST00000561668 MARCH10Q8NA82 808 aaPredicted RBP25.62■■□□□ 1.69
PKD1-223ENST00000561668 KNSTRNQ9Y448 316 aa25.62■■□□□ 1.69
PKD1-223ENST00000561668 SMG6Q86US8 1419 aaKnown RBP25.62■■□□□ 1.69
PKD1-223ENST00000561668 KIF24Q5T7B8 1368 aa25.61■■□□□ 1.69
PKD1-223ENST00000561668 PER1O15534 1290 aaPredicted RBP25.61■■□□□ 1.69
PKD1-223ENST00000561668 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
PKD1-223ENST00000561668 LRRC37A3O60309 1634 aa25.6■■□□□ 1.69
PKD1-223ENST00000561668 FLT4P35916 1363 aa25.59■■□□□ 1.69
PKD1-223ENST00000561668 WNK3Q9BYP7 1800 aa25.59■■□□□ 1.69
PKD1-223ENST00000561668 HSP90AB2PQ58FF8 381 aa25.59■■□□□ 1.69
PKD1-223ENST00000561668 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
PKD1-223ENST00000561668 INSRP06213 1382 aa25.57■■□□□ 1.68
PKD1-223ENST00000561668 EZH2Q15910 746 aaKnown RBP25.57■■□□□ 1.68
PKD1-223ENST00000561668 EMILIN1Q9Y6C2 1016 aa25.57■■□□□ 1.68
PKD1-223ENST00000561668 FAM208AQ9UK61 1670 aaKnown RBP25.57■■□□□ 1.68
PKD1-223ENST00000561668 NSD2O96028 1365 aa25.56■■□□□ 1.68
PKD1-223ENST00000561668 BCL11BQ9C0K0 894 aaPredicted RBP25.56■■□□□ 1.68
PKD1-223ENST00000561668 NBPF6Q5VWK0 638 aa25.55■■□□□ 1.68
PKD1-223ENST00000561668 MORC1Q86VD1 984 aa25.55■■□□□ 1.68
PKD1-223ENST00000561668 NBPF4Q96M43 638 aa25.55■■□□□ 1.68
PKD1-223ENST00000561668 CAMKK2Q96RR4 588 aa25.55■■□□□ 1.68
PKD1-223ENST00000561668 DDX54Q8TDD1 881 aaKnown RBP25.54■■□□□ 1.68
PKD1-223ENST00000561668 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
PKD1-223ENST00000561668 AMER1Q5JTC6 1135 aaPredicted RBP25.53■■□□□ 1.68
PKD1-223ENST00000561668 RAPGEF4Q8WZA2 1011 aa25.53■■□□□ 1.68
PKD1-223ENST00000561668 TNS1Q9HBL0 1735 aaKnown RBP25.53■■□□□ 1.68
PKD1-223ENST00000561668 ANKRD26Q9UPS8 1709 aa25.53■■□□□ 1.68
PKD1-223ENST00000561668 PARD3Q8TEW0 1356 aa25.53■■□□□ 1.68
PKD1-223ENST00000561668 POLKQ9UBT6 870 aa25.52■■□□□ 1.68
PKD1-223ENST00000561668 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
PKD1-223ENST00000561668 BCL9O00512 1426 aa25.51■■□□□ 1.67
PKD1-223ENST00000561668 USHBP1Q8N6Y0 703 aa25.5■■□□□ 1.67
PKD1-223ENST00000561668 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
PKD1-223ENST00000561668 PEAK1Q9H792 1746 aa25.5■■□□□ 1.67
PKD1-223ENST00000561668 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
PKD1-223ENST00000561668 PLSCR1O15162 318 aa25.49■■□□□ 1.67
PKD1-223ENST00000561668 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
PKD1-223ENST00000561668 NBPF14Q5TI25 921 aa25.48■■□□□ 1.67
PKD1-223ENST00000561668 ACSBG1Q96GR2 724 aa25.47■■□□□ 1.67
PKD1-223ENST00000561668 RGPD2P0DJD1 1756 aa25.46■■□□□ 1.67
PKD1-223ENST00000561668 SBF2Q86WG5 1849 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms