RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 HOXC9P31274 260 aa31.32■■■□□ 2.6
TMEM249-201ENST00000561638 HSP90AB2PQ58FF8 381 aa31.3■■■□□ 2.6
TMEM249-201ENST00000561638 IP6K1Q92551 441 aa31.3■■■□□ 2.6
TMEM249-201ENST00000561638 PEAK1Q9H792 1746 aa31.3■■■□□ 2.6
TMEM249-201ENST00000561638 CCER2I3L3R5 266 aa31.29■■■□□ 2.6
TMEM249-201ENST00000561638 MEX3CQ5U5Q3 659 aaKnown RBP31.28■■■□□ 2.6
TMEM249-201ENST00000561638 FAM83GA6ND36 823 aa31.28■■■□□ 2.6
TMEM249-201ENST00000561638 CCDC184Q52MB2 194 aa31.27■■■□□ 2.6
TMEM249-201ENST00000561638 LRP6O75581 1613 aa31.26■■■□□ 2.59
TMEM249-201ENST00000561638 LTV1Q96GA3 475 aaPredicted RBP31.25■■■□□ 2.59
TMEM249-201ENST00000561638 INSRP06213 1382 aa31.25■■■□□ 2.59
TMEM249-201ENST00000561638 BLMP54132 1417 aaPredicted RBP31.25■■■□□ 2.59
TMEM249-201ENST00000561638 AXIN2Q9Y2T1 843 aa31.25■■■□□ 2.59
TMEM249-201ENST00000561638 ABCC6O95255 1503 aa31.24■■■□□ 2.59
TMEM249-201ENST00000561638 DIAPH1O60610 1272 aaKnown RBP31.24■■■□□ 2.59
TMEM249-201ENST00000561638 C8orf37Q96NL8 207 aa31.24■■■□□ 2.59
TMEM249-201ENST00000561638 COL14A1Q05707 1796 aaKnown RBP31.22■■■□□ 2.59
TMEM249-201ENST00000561638 NGLY1Q96IV0 654 aa31.21■■■□□ 2.59
TMEM249-201ENST00000561638 BTG4Q9NY30 223 aa31.21■■■□□ 2.59
TMEM249-201ENST00000561638 COL3A1P02461 1466 aaPredicted RBP31.2■■■□□ 2.59
TMEM249-201ENST00000561638 EIF4A2Q14240 407 aaKnown RBP31.2■■■□□ 2.58
TMEM249-201ENST00000561638 NUDCQ9Y266 331 aa31.2■■■□□ 2.58
TMEM249-201ENST00000561638 COL18A1P39060 1754 aa31.2■■■□□ 2.58
TMEM249-201ENST00000561638 CSB-PGBD3P0DP91 1061 aa31.19■■■□□ 2.58
TMEM249-201ENST00000561638 ANKRD24Q8TF21 1146 aa31.19■■■□□ 2.58
TMEM249-201ENST00000561638 EVA1CP58658 441 aa31.18■■■□□ 2.58
TMEM249-201ENST00000561638 LMO7Q8WWI1 1683 aa31.18■■■□□ 2.58
TMEM249-201ENST00000561638 CAMTA1Q9Y6Y1 1673 aa31.18■■■□□ 2.58
TMEM249-201ENST00000561638 U2SURPO15042 1029 aaKnown RBP31.17■■■□□ 2.58
TMEM249-201ENST00000561638 ERBB3P21860 1342 aa31.17■■■□□ 2.58
TMEM249-201ENST00000561638 RGPD5Q99666 1765 aa31.17■■■□□ 2.58
TMEM249-201ENST00000561638 WDR43Q15061 677 aaKnown RBP eCLIP31.17■■■□□ 2.58
TMEM249-201ENST00000561638 STRN4Q9NRL3 753 aa31.17■■■□□ 2.58
TMEM249-201ENST00000561638 IL13P35225 146 aa31.15■■■□□ 2.58
TMEM249-201ENST00000561638 PLCH1Q4KWH8 1693 aa31.14■■■□□ 2.58
TMEM249-201ENST00000561638 COL5A2P05997 1499 aaPredicted RBP31.14■■■□□ 2.58
TMEM249-201ENST00000561638 ILDR1Q86SU0 546 aaPredicted RBP31.13■■■□□ 2.57
TMEM249-201ENST00000561638 U2AF1L5P0DN76 240 aaPredicted RBP31.12■■■□□ 2.57
TMEM249-201ENST00000561638 U2AF1Q01081 240 aaKnown RBP eCLIP31.12■■■□□ 2.57
TMEM249-201ENST00000561638 FAM9BQ8IZU0 186 aa31.1■■■□□ 2.57
TMEM249-201ENST00000561638 NLRP2Q9NX02 1062 aa31.1■■■□□ 2.57
TMEM249-201ENST00000561638 TOM1L2Q6ZVM7 507 aa31.1■■■□□ 2.57
TMEM249-201ENST00000561638 PNISRQ8TF01 805 aaKnown RBP31.1■■■□□ 2.57
TMEM249-201ENST00000561638 SLIT2O94813 1529 aa31.09■■■□□ 2.57
TMEM249-201ENST00000561638 WDR17Q8IZU2 1322 aa31.09■■■□□ 2.57
TMEM249-201ENST00000561638 NWD2Q9ULI1 1742 aa31.08■■■□□ 2.57
TMEM249-201ENST00000561638 EYA1Q99502 592 aa31.07■■■□□ 2.56
TMEM249-201ENST00000561638 FNBP4Q8N3X1 1017 aaPredicted RBP31.07■■■□□ 2.56
TMEM249-201ENST00000561638 LARP1Q6PKG0 1096 aaKnown RBP31.06■■■□□ 2.56
TMEM249-201ENST00000561638 USP21Q9UK80 565 aa31.06■■■□□ 2.56
TMEM249-201ENST00000561638 NBPF6Q5VWK0 638 aa31.05■■■□□ 2.56
TMEM249-201ENST00000561638 UNC5CLQ8IV45 518 aa31.05■■■□□ 2.56
TMEM249-201ENST00000561638 NBPF4Q96M43 638 aa31.05■■■□□ 2.56
TMEM249-201ENST00000561638 AFF2P51816 1311 aa31.05■■■□□ 2.56
TMEM249-201ENST00000561638 FAM208AQ9UK61 1670 aaKnown RBP31.04■■■□□ 2.56
TMEM249-201ENST00000561638 HMOX1P09601 288 aa31.04■■■□□ 2.56
TMEM249-201ENST00000561638 USHBP1Q8N6Y0 703 aa31.04■■■□□ 2.56
TMEM249-201ENST00000561638 IGSF1Q8N6C5 1336 aa31.04■■■□□ 2.56
TMEM249-201ENST00000561638 SULT6B1Q6IMI4 303 aa31.03■■■□□ 2.56
TMEM249-201ENST00000561638 ADAMTS8Q9UP79 889 aa31.03■■■□□ 2.56
TMEM249-201ENST00000561638 USP35Q9P2H5 1018 aa31.02■■■□□ 2.56
TMEM249-201ENST00000561638 CCDC9Q9Y3X0 531 aaKnown RBP31.02■■■□□ 2.56
TMEM249-201ENST00000561638 CRB1P82279 1406 aa31.02■■■□□ 2.56
TMEM249-201ENST00000561638 NRAPQ86VF7 1730 aa31.02■■■□□ 2.56
TMEM249-201ENST00000561638 BCL9LQ86UU0 1499 aa31.01■■■□□ 2.56
TMEM249-201ENST00000561638 RGPD1P0DJD0 1748 aa31■■■□□ 2.55
TMEM249-201ENST00000561638 RGPD2P0DJD1 1756 aa31■■■□□ 2.55
TMEM249-201ENST00000561638 AEBP1Q8IUX7 1158 aa31■■■□□ 2.55
TMEM249-201ENST00000561638 CARD10Q9BWT7 1032 aa30.98■■■□□ 2.55
TMEM249-201ENST00000561638 FCHSD2O94868 740 aa30.96■■■□□ 2.55
TMEM249-201ENST00000561638 PNNQ9H307 717 aaKnown RBP30.95■■■□□ 2.55
TMEM249-201ENST00000561638 KDRP35968 1356 aa30.94■■■□□ 2.54
TMEM249-201ENST00000561638 NEFMP07197 916 aa30.94■■■□□ 2.54
TMEM249-201ENST00000561638 PRKAR2BP31323 418 aa30.94■■■□□ 2.54
TMEM249-201ENST00000561638 VPS72Q15906 364 aa30.94■■■□□ 2.54
TMEM249-201ENST00000561638 RSPH6AQ9H0K4 717 aa30.94■■■□□ 2.54
TMEM249-201ENST00000561638 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.93■■■□□ 2.54
TMEM249-201ENST00000561638 CCDC146Q8IYE0 955 aa30.93■■■□□ 2.54
TMEM249-201ENST00000561638 RAPGEF4Q8WZA2 1011 aa30.92■■■□□ 2.54
TMEM249-201ENST00000561638 SPATA31A1Q5TZJ5 1347 aa30.91■■■□□ 2.54
TMEM249-201ENST00000561638 SPATA31A5Q5VU36 1347 aa30.91■■■□□ 2.54
TMEM249-201ENST00000561638 SPATA31A7Q8IWB4 1347 aa30.91■■■□□ 2.54
TMEM249-201ENST00000561638 ZNF772Q68DY9 489 aaPredicted RBP30.91■■■□□ 2.54
TMEM249-201ENST00000561638 TCP11L2Q8N4U5 519 aa30.91■■■□□ 2.54
TMEM249-201ENST00000561638 PHF23Q9BUL5 403 aaPredicted RBP30.91■■■□□ 2.54
TMEM249-201ENST00000561638 TRPC5Q9UL62 973 aaPredicted RBP30.91■■■□□ 2.54
TMEM249-201ENST00000561638 MAPK8IP3Q9UPT6 1336 aa30.9■■■□□ 2.54
TMEM249-201ENST00000561638 NCAPD2Q15021 1401 aa30.9■■■□□ 2.54
TMEM249-201ENST00000561638 TATP17735 454 aaPredicted RBP30.87■■■□□ 2.53
TMEM249-201ENST00000561638 RUNDC1Q96C34 613 aa30.87■■■□□ 2.53
TMEM249-201ENST00000561638 QTRT2Q9H974 415 aaKnown RBP30.87■■■□□ 2.53
TMEM249-201ENST00000561638 IL2RBP14784 551 aa30.86■■■□□ 2.53
TMEM249-201ENST00000561638 THRAP3Q9Y2W1 955 aaKnown RBP30.86■■■□□ 2.53
TMEM249-201ENST00000561638 PLEKHF1Q96S99 279 aa30.84■■■□□ 2.53
TMEM249-201ENST00000561638 ATRNO75882 1429 aa30.84■■■□□ 2.53
TMEM249-201ENST00000561638 GJD4Q96KN9 370 aaPredicted RBP30.84■■■□□ 2.53
TMEM249-201ENST00000561638 MEGF6O75095 1541 aa30.83■■■□□ 2.53
TMEM249-201ENST00000561638 PHACTR3Q96KR7 559 aa30.82■■■□□ 2.52
TMEM249-201ENST00000561638 A0A0G2JS52 829 aa30.81■■■□□ 2.52
TMEM249-201ENST00000561638 FAM98CQ17RN3 349 aaKnown RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms