RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 USP54Q70EL1 1684 aa33.28■■■□□ 2.92
CDR2-202ENST00000561630 THRAP3Q9Y2W1 955 aaKnown RBP33.27■■■□□ 2.92
CDR2-202ENST00000561630 CRB1P82279 1406 aa33.27■■■□□ 2.92
CDR2-202ENST00000561630 COL18A1P39060 1754 aa33.26■■■□□ 2.91
CDR2-202ENST00000561630 BLMP54132 1417 aaPredicted RBP33.26■■■□□ 2.91
CDR2-202ENST00000561630 OVOS2A0A0J9YW53 1432 aa33.25■■■□□ 2.91
CDR2-202ENST00000561630 OVOS2Q6IE36 1432 aa33.25■■■□□ 2.91
CDR2-202ENST00000561630 WDR17Q8IZU2 1322 aa33.23■■■□□ 2.91
CDR2-202ENST00000561630 EIF4G2P78344 907 aaKnown RBP eCLIP33.21■■■□□ 2.91
CDR2-202ENST00000561630 ABCC6O95255 1503 aa33.2■■■□□ 2.91
CDR2-202ENST00000561630 TOM1L2Q6ZVM7 507 aa33.2■■■□□ 2.91
CDR2-202ENST00000561630 FAM182BQ5T319 152 aa33.18■■■□□ 2.9
CDR2-202ENST00000561630 HSPA5P11021 654 aaKnown RBP33.17■■■□□ 2.9
CDR2-202ENST00000561630 COG3Q96JB2 828 aa33.17■■■□□ 2.9
CDR2-202ENST00000561630 SF3B2Q13435 895 aaKnown RBP33.15■■■□□ 2.9
CDR2-202ENST00000561630 CSB-PGBD3P0DP91 1061 aa33.14■■■□□ 2.9
CDR2-202ENST00000561630 PDE3BQ13370 1112 aa33.14■■■□□ 2.9
CDR2-202ENST00000561630 FYB1O15117 783 aa33.13■■■□□ 2.89
CDR2-202ENST00000561630 CARD10Q9BWT7 1032 aa33.13■■■□□ 2.89
CDR2-202ENST00000561630 FAM196AQ6ZSG2 479 aa33.11■■■□□ 2.89
CDR2-202ENST00000561630 ERBB3P21860 1342 aa33.09■■■□□ 2.89
CDR2-202ENST00000561630 DEFB132Q7Z7B7 95 aa33.09■■■□□ 2.89
CDR2-202ENST00000561630 CARD14Q9BXL6 1004 aa33.09■■■□□ 2.89
CDR2-202ENST00000561630 MYOM1P52179 1685 aa33.07■■■□□ 2.89
CDR2-202ENST00000561630 CDCA7Q9BWT1 371 aaPredicted RBP33.07■■■□□ 2.88
CDR2-202ENST00000561630 GGNBP2Q9H3C7 697 aa33.07■■■□□ 2.88
CDR2-202ENST00000561630 IP6K1Q92551 441 aa33.06■■■□□ 2.88
CDR2-202ENST00000561630 RGPD5Q99666 1765 aa33.06■■■□□ 2.88
CDR2-202ENST00000561630 PARP4Q9UKK3 1724 aaKnown RBP33.05■■■□□ 2.88
CDR2-202ENST00000561630 CCDC7Q96M83 1385 aa33.05■■■□□ 2.88
CDR2-202ENST00000561630 LTN1O94822 1766 aa33.04■■■□□ 2.88
CDR2-202ENST00000561630 MAP3K19Q56UN5 1328 aa33.03■■■□□ 2.88
CDR2-202ENST00000561630 FBLN1P23142 703 aa33.03■■■□□ 2.88
CDR2-202ENST00000561630 DDB1Q16531 1140 aa33.03■■■□□ 2.88
CDR2-202ENST00000561630 ANKRD24Q8TF21 1146 aa33.03■■■□□ 2.88
CDR2-202ENST00000561630 POLR3GLQ9BT43 218 aa33.03■■■□□ 2.88
CDR2-202ENST00000561630 NSD3Q9BZ95 1437 aa33.02■■■□□ 2.88
CDR2-202ENST00000561630 BAG6P46379 1132 aa33.02■■■□□ 2.88
CDR2-202ENST00000561630 DISP2A7MBM2 1401 aa33.02■■■□□ 2.88
CDR2-202ENST00000561630 NLRP2Q9NX02 1062 aa33.01■■■□□ 2.87
CDR2-202ENST00000561630 TRIM37O94972 964 aa32.99■■■□□ 2.87
CDR2-202ENST00000561630 C11orf95C9JLR9 678 aaPredicted RBP32.98■■■□□ 2.87
CDR2-202ENST00000561630 HOXC9P31274 260 aa32.98■■■□□ 2.87
CDR2-202ENST00000561630 AMPHP49418 695 aa32.98■■■□□ 2.87
CDR2-202ENST00000561630 LRRC37A3O60309 1634 aa32.97■■■□□ 2.87
CDR2-202ENST00000561630 RGPD1P0DJD0 1748 aa32.96■■■□□ 2.87
CDR2-202ENST00000561630 RRS1Q15050 365 aaKnown RBP32.95■■■□□ 2.87
CDR2-202ENST00000561630 RTL1A6NKG5 1358 aa32.95■■■□□ 2.86
CDR2-202ENST00000561630 OVOS2A0A0G2JMS6 1433 aa32.94■■■□□ 2.86
CDR2-202ENST00000561630 CGNL1Q0VF96 1302 aa32.94■■■□□ 2.86
CDR2-202ENST00000561630 EN1Q05925 392 aaPredicted RBP32.93■■■□□ 2.86
CDR2-202ENST00000561630 EXOC5O00471 708 aa32.92■■■□□ 2.86
CDR2-202ENST00000561630 LTV1Q96GA3 475 aaPredicted RBP32.92■■■□□ 2.86
CDR2-202ENST00000561630 WNK3Q9BYP7 1800 aa32.92■■■□□ 2.86
CDR2-202ENST00000561630 MARCH10Q8NA82 808 aaPredicted RBP32.91■■■□□ 2.86
CDR2-202ENST00000561630 KIF20BQ96Q89 1820 aa32.91■■■□□ 2.86
CDR2-202ENST00000561630 TNS1Q9HBL0 1735 aaKnown RBP32.9■■■□□ 2.86
CDR2-202ENST00000561630 SRCAPQ6ZRS2 3230 aa32.89■■■□□ 2.86
CDR2-202ENST00000561630 IL2RBP14784 551 aa32.89■■■□□ 2.86
CDR2-202ENST00000561630 PEAK1Q9H792 1746 aa32.88■■■□□ 2.85
CDR2-202ENST00000561630 APBA3O96018 575 aa32.88■■■□□ 2.85
CDR2-202ENST00000561630 PANK3Q9H999 370 aa32.88■■■□□ 2.85
CDR2-202ENST00000561630 BCL9O00512 1426 aa32.86■■■□□ 2.85
CDR2-202ENST00000561630 TNS2Q63HR2 1409 aa32.86■■■□□ 2.85
CDR2-202ENST00000561630 KIF24Q5T7B8 1368 aa32.86■■■□□ 2.85
CDR2-202ENST00000561630 CAMKK2Q96RR4 588 aa32.86■■■□□ 2.85
CDR2-202ENST00000561630 EZH2Q15910 746 aaKnown RBP32.83■■■□□ 2.85
CDR2-202ENST00000561630 FLT4P35916 1363 aa32.83■■■□□ 2.85
CDR2-202ENST00000561630 PARD3Q8TEW0 1356 aa32.82■■■□□ 2.84
CDR2-202ENST00000561630 FAM208AQ9UK61 1670 aaKnown RBP32.82■■■□□ 2.84
CDR2-202ENST00000561630 HSP90AB2PQ58FF8 381 aa32.81■■■□□ 2.84
CDR2-202ENST00000561630 INSRP06213 1382 aa32.81■■■□□ 2.84
CDR2-202ENST00000561630 EMILIN1Q9Y6C2 1016 aa32.8■■■□□ 2.84
CDR2-202ENST00000561630 KIF7Q2M1P5 1343 aa32.79■■■□□ 2.84
CDR2-202ENST00000561630 BCL11BQ9C0K0 894 aaPredicted RBP32.79■■■□□ 2.84
CDR2-202ENST00000561630 SMG6Q86US8 1419 aaKnown RBP32.78■■■□□ 2.84
CDR2-202ENST00000561630 NBPF6Q5VWK0 638 aa32.77■■■□□ 2.84
CDR2-202ENST00000561630 NBPF4Q96M43 638 aa32.77■■■□□ 2.84
CDR2-202ENST00000561630 PTF1AQ7RTS3 328 aa32.74■■■□□ 2.83
CDR2-202ENST00000561630 NSD2O96028 1365 aa32.73■■■□□ 2.83
CDR2-202ENST00000561630 PPM1GO15355 546 aaPredicted RBP32.72■■■□□ 2.83
CDR2-202ENST00000561630 POLKQ9UBT6 870 aa32.72■■■□□ 2.83
CDR2-202ENST00000561630 WASHC2AQ641Q2 1341 aa32.71■■■□□ 2.83
CDR2-202ENST00000561630 PLSCR1O15162 318 aa32.7■■■□□ 2.83
CDR2-202ENST00000561630 KNSTRNQ9Y448 316 aa32.7■■■□□ 2.83
CDR2-202ENST00000561630 USHBP1Q8N6Y0 703 aa32.69■■■□□ 2.82
CDR2-202ENST00000561630 SBF2Q86WG5 1849 aa32.69■■■□□ 2.82
CDR2-202ENST00000561630 TNNT2P45379 298 aaPredicted RBP32.68■■■□□ 2.82
CDR2-202ENST00000561630 MEGF6O75095 1541 aa32.67■■■□□ 2.82
CDR2-202ENST00000561630 DDX54Q8TDD1 881 aaKnown RBP32.67■■■□□ 2.82
CDR2-202ENST00000561630 ANKRD26Q9UPS8 1709 aa32.66■■■□□ 2.82
CDR2-202ENST00000561630 PSDA5PKW4 1024 aaPredicted RBP32.66■■■□□ 2.82
CDR2-202ENST00000561630 KCNQ2O43526 872 aa32.66■■■□□ 2.82
CDR2-202ENST00000561630 ZCRB1Q8TBF4 217 aaKnown RBP32.66■■■□□ 2.82
CDR2-202ENST00000561630 RAPGEF4Q8WZA2 1011 aa32.65■■■□□ 2.82
CDR2-202ENST00000561630 RGPD2P0DJD1 1756 aa32.65■■■□□ 2.82
CDR2-202ENST00000561630 R3HDM1Q15032 1099 aaKnown RBP32.63■■■□□ 2.81
CDR2-202ENST00000561630 MORC1Q86VD1 984 aa32.63■■■□□ 2.81
CDR2-202ENST00000561630 ACSBG1Q96GR2 724 aa32.63■■■□□ 2.81
CDR2-202ENST00000561630 RREB1Q92766 1687 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms