RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CRB1P82279 1406 aa28.9■■■□□ 2.22
TPM1-232ENST00000561425 OVOS2Q6IE36 1432 aa28.9■■■□□ 2.22
TPM1-232ENST00000561425 A0A0G2JS52 829 aa28.88■■■□□ 2.21
TPM1-232ENST00000561425 MYT1Q01538 1121 aa28.88■■■□□ 2.21
TPM1-232ENST00000561425 USP35Q9P2H5 1018 aa28.88■■■□□ 2.21
TPM1-232ENST00000561425 ABCC6O95255 1503 aa28.88■■■□□ 2.21
TPM1-232ENST00000561425 ZBTB7CA1YPR0 619 aa28.87■■■□□ 2.21
TPM1-232ENST00000561425 WDR17Q8IZU2 1322 aa28.87■■■□□ 2.21
TPM1-232ENST00000561425 SOX12O15370 315 aa28.86■■■□□ 2.21
TPM1-232ENST00000561425 EIF4G2P78344 907 aaKnown RBP eCLIP28.83■■■□□ 2.21
TPM1-232ENST00000561425 FYB1O15117 783 aa28.81■■■□□ 2.2
TPM1-232ENST00000561425 TOM1L2Q6ZVM7 507 aa28.81■■■□□ 2.2
TPM1-232ENST00000561425 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
TPM1-232ENST00000561425 FAM182BQ5T319 152 aa28.8■■■□□ 2.2
TPM1-232ENST00000561425 CARD10Q9BWT7 1032 aa28.8■■■□□ 2.2
TPM1-232ENST00000561425 COG3Q96JB2 828 aa28.79■■■□□ 2.2
TPM1-232ENST00000561425 CARD14Q9BXL6 1004 aa28.79■■■□□ 2.2
TPM1-232ENST00000561425 FAM196AQ6ZSG2 479 aa28.77■■■□□ 2.2
TPM1-232ENST00000561425 ERBB3P21860 1342 aa28.75■■■□□ 2.19
TPM1-232ENST00000561425 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
TPM1-232ENST00000561425 CDCA7Q9BWT1 371 aaPredicted RBP28.75■■■□□ 2.19
TPM1-232ENST00000561425 RGPD5Q99666 1765 aa28.75■■■□□ 2.19
TPM1-232ENST00000561425 MYOM1P52179 1685 aa28.74■■■□□ 2.19
TPM1-232ENST00000561425 SF3B2Q13435 895 aaKnown RBP28.74■■■□□ 2.19
TPM1-232ENST00000561425 DEFB132Q7Z7B7 95 aa28.74■■■□□ 2.19
TPM1-232ENST00000561425 IP6K1Q92551 441 aa28.74■■■□□ 2.19
TPM1-232ENST00000561425 PARP4Q9UKK3 1724 aaKnown RBP28.74■■■□□ 2.19
TPM1-232ENST00000561425 DISP2A7MBM2 1401 aa28.72■■■□□ 2.19
TPM1-232ENST00000561425 CSB-PGBD3P0DP91 1061 aa28.72■■■□□ 2.19
TPM1-232ENST00000561425 CCDC7Q96M83 1385 aa28.72■■■□□ 2.19
TPM1-232ENST00000561425 GGNBP2Q9H3C7 697 aa28.71■■■□□ 2.19
TPM1-232ENST00000561425 MAP3K19Q56UN5 1328 aa28.7■■■□□ 2.19
TPM1-232ENST00000561425 LTN1O94822 1766 aa28.7■■■□□ 2.18
TPM1-232ENST00000561425 FBLN1P23142 703 aa28.69■■■□□ 2.18
TPM1-232ENST00000561425 ANKRD24Q8TF21 1146 aa28.69■■■□□ 2.18
TPM1-232ENST00000561425 C11orf95C9JLR9 678 aaPredicted RBP28.68■■■□□ 2.18
TPM1-232ENST00000561425 DDB1Q16531 1140 aa28.68■■■□□ 2.18
TPM1-232ENST00000561425 BAG6P46379 1132 aa28.67■■■□□ 2.18
TPM1-232ENST00000561425 NSD3Q9BZ95 1437 aa28.66■■■□□ 2.18
TPM1-232ENST00000561425 HOXC9P31274 260 aa28.65■■■□□ 2.18
TPM1-232ENST00000561425 RGPD1P0DJD0 1748 aa28.64■■■□□ 2.18
TPM1-232ENST00000561425 BCL9O00512 1426 aa28.64■■■□□ 2.18
TPM1-232ENST00000561425 TRIM37O94972 964 aa28.64■■■□□ 2.18
TPM1-232ENST00000561425 LRRC37A3O60309 1634 aa28.64■■■□□ 2.18
TPM1-232ENST00000561425 NLRP2Q9NX02 1062 aa28.63■■■□□ 2.17
TPM1-232ENST00000561425 WNK3Q9BYP7 1800 aa28.62■■■□□ 2.17
TPM1-232ENST00000561425 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
TPM1-232ENST00000561425 PEAK1Q9H792 1746 aa28.62■■■□□ 2.17
TPM1-232ENST00000561425 RTL1A6NKG5 1358 aa28.62■■■□□ 2.17
TPM1-232ENST00000561425 EXOC5O00471 708 aa28.6■■■□□ 2.17
TPM1-232ENST00000561425 AMPHP49418 695 aa28.6■■■□□ 2.17
TPM1-232ENST00000561425 EN1Q05925 392 aaPredicted RBP28.6■■■□□ 2.17
TPM1-232ENST00000561425 RRS1Q15050 365 aaKnown RBP28.6■■■□□ 2.17
TPM1-232ENST00000561425 TNS1Q9HBL0 1735 aaKnown RBP28.6■■■□□ 2.17
TPM1-232ENST00000561425 OVOS2A0A0G2JMS6 1433 aa28.6■■■□□ 2.17
TPM1-232ENST00000561425 CAMKK2Q96RR4 588 aa28.59■■■□□ 2.17
TPM1-232ENST00000561425 KIF24Q5T7B8 1368 aa28.59■■■□□ 2.17
TPM1-232ENST00000561425 CGNL1Q0VF96 1302 aa28.58■■■□□ 2.17
TPM1-232ENST00000561425 IL2RBP14784 551 aa28.57■■■□□ 2.16
TPM1-232ENST00000561425 KIF20BQ96Q89 1820 aa28.57■■■□□ 2.16
TPM1-232ENST00000561425 PANK3Q9H999 370 aa28.56■■■□□ 2.16
TPM1-232ENST00000561425 APBA3O96018 575 aa28.55■■■□□ 2.16
TPM1-232ENST00000561425 POLR3GLQ9BT43 218 aa28.55■■■□□ 2.16
TPM1-232ENST00000561425 TNS2Q63HR2 1409 aa28.54■■■□□ 2.16
TPM1-232ENST00000561425 INSRP06213 1382 aa28.53■■■□□ 2.16
TPM1-232ENST00000561425 PARD3Q8TEW0 1356 aa28.53■■■□□ 2.16
TPM1-232ENST00000561425 EZH2Q15910 746 aaKnown RBP28.53■■■□□ 2.16
TPM1-232ENST00000561425 LTV1Q96GA3 475 aaPredicted RBP28.53■■■□□ 2.16
TPM1-232ENST00000561425 FAM208AQ9UK61 1670 aaKnown RBP28.51■■■□□ 2.16
TPM1-232ENST00000561425 HSP90AB2PQ58FF8 381 aa28.51■■■□□ 2.15
TPM1-232ENST00000561425 FLT4P35916 1363 aa28.5■■■□□ 2.15
TPM1-232ENST00000561425 BCL11BQ9C0K0 894 aaPredicted RBP28.5■■■□□ 2.15
TPM1-232ENST00000561425 KIF7Q2M1P5 1343 aa28.48■■■□□ 2.15
TPM1-232ENST00000561425 PLSCR1O15162 318 aa28.48■■■□□ 2.15
TPM1-232ENST00000561425 NBPF6Q5VWK0 638 aa28.48■■■□□ 2.15
TPM1-232ENST00000561425 NBPF4Q96M43 638 aa28.48■■■□□ 2.15
TPM1-232ENST00000561425 PTF1AQ7RTS3 328 aa28.47■■■□□ 2.15
TPM1-232ENST00000561425 EMILIN1Q9Y6C2 1016 aa28.47■■■□□ 2.15
TPM1-232ENST00000561425 SBF2Q86WG5 1849 aa28.46■■■□□ 2.15
TPM1-232ENST00000561425 POLKQ9UBT6 870 aa28.45■■■□□ 2.14
TPM1-232ENST00000561425 WASHC2AQ641Q2 1341 aa28.44■■■□□ 2.14
TPM1-232ENST00000561425 NSD2O96028 1365 aa28.44■■■□□ 2.14
TPM1-232ENST00000561425 SMG6Q86US8 1419 aaKnown RBP28.42■■■□□ 2.14
TPM1-232ENST00000561425 ANKRD26Q9UPS8 1709 aa28.4■■■□□ 2.14
TPM1-232ENST00000561425 MEGF6O75095 1541 aa28.38■■■□□ 2.13
TPM1-232ENST00000561425 NCAPD2Q15021 1401 aa28.38■■■□□ 2.13
TPM1-232ENST00000561425 RGPD2P0DJD1 1756 aa28.38■■■□□ 2.13
TPM1-232ENST00000561425 PER1O15534 1290 aaPredicted RBP28.38■■■□□ 2.13
TPM1-232ENST00000561425 KCNQ2O43526 872 aa28.38■■■□□ 2.13
TPM1-232ENST00000561425 RREB1Q92766 1687 aa28.38■■■□□ 2.13
TPM1-232ENST00000561425 ZCRB1Q8TBF4 217 aaKnown RBP28.37■■■□□ 2.13
TPM1-232ENST00000561425 AMER1Q5JTC6 1135 aaPredicted RBP28.36■■■□□ 2.13
TPM1-232ENST00000561425 PROM2Q8N271 834 aa28.36■■■□□ 2.13
TPM1-232ENST00000561425 KNSTRNQ9Y448 316 aa28.36■■■□□ 2.13
TPM1-232ENST00000561425 RGPD3A6NKT7 1758 aaPredicted RBP28.35■■■□□ 2.13
TPM1-232ENST00000561425 RGPD4Q7Z3J3 1758 aa28.35■■■□□ 2.13
TPM1-232ENST00000561425 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
TPM1-232ENST00000561425 PSDA5PKW4 1024 aaPredicted RBP28.33■■■□□ 2.13
TPM1-232ENST00000561425 PPM1GO15355 546 aaPredicted RBP28.33■■■□□ 2.13
TPM1-232ENST00000561425 DDX54Q8TDD1 881 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms