RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 SLIT2O94813 1529 aa9.77□□□□□ -0.84
SPRED1-203ENST00000561317 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
SPRED1-203ENST00000561317 PAXIP1Q6ZW49 1069 aaPredicted RBP9.77□□□□□ -0.85
SPRED1-203ENST00000561317 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
SPRED1-203ENST00000561317 RPGRIP1LQ68CZ1 1315 aa9.77□□□□□ -0.85
SPRED1-203ENST00000561317 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.85
SPRED1-203ENST00000561317 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
SPRED1-203ENST00000561317 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
SPRED1-203ENST00000561317 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
SPRED1-203ENST00000561317 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
SPRED1-203ENST00000561317 KDM2AQ9Y2K7 1162 aa9.76□□□□□ -0.85
SPRED1-203ENST00000561317 FAM83GA6ND36 823 aa9.75□□□□□ -0.85
SPRED1-203ENST00000561317 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
SPRED1-203ENST00000561317 PSME1Q06323 249 aa9.75□□□□□ -0.85
SPRED1-203ENST00000561317 EZH2Q15910 746 aaKnown RBP9.75□□□□□ -0.85
SPRED1-203ENST00000561317 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.75□□□□□ -0.85
SPRED1-203ENST00000561317 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
SPRED1-203ENST00000561317 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
SPRED1-203ENST00000561317 KIF1BO60333 1816 aa9.74□□□□□ -0.85
SPRED1-203ENST00000561317 TMEM132EQ6IEE7 984 aa9.73□□□□□ -0.85
SPRED1-203ENST00000561317 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
SPRED1-203ENST00000561317 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
SPRED1-203ENST00000561317 BTG4Q9NY30 223 aa9.73□□□□□ -0.85
SPRED1-203ENST00000561317 TRIM37O94972 964 aa9.72□□□□□ -0.85
SPRED1-203ENST00000561317 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
SPRED1-203ENST00000561317 RYDENQ9NUL5 291 aaKnown RBP9.72□□□□□ -0.85
SPRED1-203ENST00000561317 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
SPRED1-203ENST00000561317 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
SPRED1-203ENST00000561317 SOX12O15370 315 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 APBA3O96018 575 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 NBPF8Q3BBV2 869 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 PLEKHH1Q9ULM0 1364 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 USP32Q8NFA0 1604 aa9.71□□□□□ -0.86
SPRED1-203ENST00000561317 SAFB2Q14151 953 aaKnown RBP eCLIP9.7□□□□□ -0.861e-9■■■■■ 28.8
SPRED1-203ENST00000561317 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
SPRED1-203ENST00000561317 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
SPRED1-203ENST00000561317 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
SPRED1-203ENST00000561317 TNS3Q68CZ2 1445 aa9.69□□□□□ -0.86
SPRED1-203ENST00000561317 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
SPRED1-203ENST00000561317 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
SPRED1-203ENST00000561317 CAMKK2Q96RR4 588 aa9.69□□□□□ -0.86
SPRED1-203ENST00000561317 PLCH1Q4KWH8 1693 aa9.68□□□□□ -0.86
SPRED1-203ENST00000561317 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
SPRED1-203ENST00000561317 NLRP6P59044 892 aa9.67□□□□□ -0.86
SPRED1-203ENST00000561317 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SPRED1-203ENST00000561317 CFAP70Q5T0N1 1121 aa9.67□□□□□ -0.86
SPRED1-203ENST00000561317 FAM196AQ6ZSG2 479 aa9.67□□□□□ -0.86
SPRED1-203ENST00000561317 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
SPRED1-203ENST00000561317 NRXN1Q9ULB1 1477 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 PIK3C2GO75747 1445 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
SPRED1-203ENST00000561317 SPATA31A5Q5VU36 1347 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 SPATA31A7Q8IWB4 1347 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 RGPD1P0DJD0 1748 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 NWD2Q9ULI1 1742 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 C14orf93Q9H972 538 aaKnown RBP9.66□□□□□ -0.86
SPRED1-203ENST00000561317 SPON1Q9HCB6 807 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
SPRED1-203ENST00000561317 SBNO1A3KN83 1393 aa9.65□□□□□ -0.86
SPRED1-203ENST00000561317 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.86
SPRED1-203ENST00000561317 KIF1AQ12756 1690 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
SPRED1-203ENST00000561317 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 KCNQ2O43526 872 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 FAM163AQ96GL9 167 aaPredicted RBP9.64□□□□□ -0.87
SPRED1-203ENST00000561317 MS4A4AQ96JQ5 239 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 CARD11Q9BXL7 1154 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 PRDM11Q9NQV5 511 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 POGKQ9P215 609 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 PPLO60437 1756 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
SPRED1-203ENST00000561317 EVA1CP58658 441 aa9.63□□□□□ -0.87
SPRED1-203ENST00000561317 CHRNA2Q15822 529 aa9.63□□□□□ -0.87
SPRED1-203ENST00000561317 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
SPRED1-203ENST00000561317 PRAM1Q96QH2 718 aa9.63□□□□□ -0.87
SPRED1-203ENST00000561317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.874e-6■■□□□ 13.5
SPRED1-203ENST00000561317 DISP2A7MBM2 1401 aa9.63□□□□□ -0.87
SPRED1-203ENST00000561317 YTHDC2Q9H6S0 1430 aaKnown RBP9.62□□□□□ -0.87
SPRED1-203ENST00000561317 IFT172Q9UG01 1749 aa9.62□□□□□ -0.87
SPRED1-203ENST00000561317 GPRASP1Q5JY77 1395 aa9.62□□□□□ -0.87
SPRED1-203ENST00000561317 SPATA31A1Q5TZJ5 1347 aa9.61□□□□□ -0.87
SPRED1-203ENST00000561317 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
SPRED1-203ENST00000561317 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
SPRED1-203ENST00000561317 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
SPRED1-203ENST00000561317 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
SPRED1-203ENST00000561317 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
SPRED1-203ENST00000561317 TSHZ2Q9NRE2 1034 aa9.61□□□□□ -0.87
SPRED1-203ENST00000561317 TECPR2O15040 1411 aa9.61□□□□□ -0.87
SPRED1-203ENST00000561317 NRAPQ86VF7 1730 aa9.61□□□□□ -0.87
SPRED1-203ENST00000561317 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
SPRED1-203ENST00000561317 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
SPRED1-203ENST00000561317 POTEMA6NI47 508 aa9.6□□□□□ -0.87
SPRED1-203ENST00000561317 EIF4G2P78344 907 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPRED1-203ENST00000561317 SIRT1Q96EB6 747 aa9.6□□□□□ -0.87
SPRED1-203ENST00000561317 COL14A1Q05707 1796 aaKnown RBP9.6□□□□□ -0.87
SPRED1-203ENST00000561317 PPP1R37O75864 691 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms