RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 MAP3K10Q02779 954 aa10.11□□□□□ -0.79
USP8-216ENST00000561206 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
USP8-216ENST00000561206 SH3BP5LQ7L8J4 393 aa10.11□□□□□ -0.79
USP8-216ENST00000561206 CDC14CA4D256 554 aa10.1□□□□□ -0.79
USP8-216ENST00000561206 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.1□□□□□ -0.79
USP8-216ENST00000561206 SENP3-EIF4A1A0A087X0R7 540 aa10.09□□□□□ -0.79
USP8-216ENST00000561206 PHF20L1A8MW92 1017 aa10.09□□□□□ -0.79
USP8-216ENST00000561206 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
USP8-216ENST00000561206 KRTAP9-2Q9BYQ4 174 aa10.09□□□□□ -0.79
USP8-216ENST00000561206 ENAMQ9NRM1 1142 aa10.09□□□□□ -0.79
USP8-216ENST00000561206 HRCP23327 699 aa10.08□□□□□ -0.8
USP8-216ENST00000561206 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
USP8-216ENST00000561206 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
USP8-216ENST00000561206 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
USP8-216ENST00000561206 PCDHB15Q9Y5E8 787 aa10.08□□□□□ -0.8
USP8-216ENST00000561206 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
USP8-216ENST00000561206 CBLBQ13191 982 aa10.07□□□□□ -0.8
USP8-216ENST00000561206 GAS6Q14393 721 aa10.07□□□□□ -0.8
USP8-216ENST00000561206 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
USP8-216ENST00000561206 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
USP8-216ENST00000561206 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
USP8-216ENST00000561206 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
USP8-216ENST00000561206 AMHR2Q16671 573 aa10.04□□□□□ -0.8
USP8-216ENST00000561206 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
USP8-216ENST00000561206 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
USP8-216ENST00000561206 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
USP8-216ENST00000561206 BEND7Q8N7W2 519 aaPredicted RBP10.03□□□□□ -0.8
USP8-216ENST00000561206 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
USP8-216ENST00000561206 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
USP8-216ENST00000561206 KRTAP9-6A0A140TA67 174 aa10.02□□□□□ -0.81
USP8-216ENST00000561206 Q8N3U1 123 aa10.02□□□□□ -0.81
USP8-216ENST00000561206 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
USP8-216ENST00000561206 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
USP8-216ENST00000561206 ERFEQ4G0M1 354 aa10□□□□□ -0.81
USP8-216ENST00000561206 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
USP8-216ENST00000561206 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
USP8-216ENST00000561206 GALNT6Q8NCL4 622 aa9.99□□□□□ -0.81
USP8-216ENST00000561206 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
USP8-216ENST00000561206 MAGEB6P1A0A0J9YX57 407 aa9.98□□□□□ -0.81
USP8-216ENST00000561206 GMCL1Q96IK5 515 aa9.98□□□□□ -0.81
USP8-216ENST00000561206 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
USP8-216ENST00000561206 CDV3Q9UKY7 258 aaKnown RBP9.98□□□□□ -0.81
USP8-216ENST00000561206 DHX9Q08211 1270 aaKnown RBP9.97□□□□□ -0.81
USP8-216ENST00000561206 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
USP8-216ENST00000561206 PODNQ7Z5L7 613 aa9.97□□□□□ -0.81
USP8-216ENST00000561206 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
USP8-216ENST00000561206 BCRP11274 1271 aa9.96□□□□□ -0.82
USP8-216ENST00000561206 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.82
USP8-216ENST00000561206 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.82
USP8-216ENST00000561206 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
USP8-216ENST00000561206 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.82
USP8-216ENST00000561206 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
USP8-216ENST00000561206 KCTD15Q96SI1 283 aaPredicted RBP9.95□□□□□ -0.82
USP8-216ENST00000561206 BAG6P46379 1132 aa9.94□□□□□ -0.82
USP8-216ENST00000561206 RELBQ01201 579 aa9.94□□□□□ -0.82
USP8-216ENST00000561206 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
USP8-216ENST00000561206 IGF1RP08069 1367 aa9.93□□□□□ -0.82
USP8-216ENST00000561206 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
USP8-216ENST00000561206 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
USP8-216ENST00000561206 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
USP8-216ENST00000561206 PDXDC2PQ6P474 469 aa9.91□□□□□ -0.82
USP8-216ENST00000561206 ALYREFQ86V81 257 aaKnown RBP9.91□□□□□ -0.82
USP8-216ENST00000561206 LILRB3O75022 631 aa9.9□□□□□ -0.82
USP8-216ENST00000561206 INTS6LQ5JSJ4 861 aaKnown RBP9.9□□□□□ -0.82
USP8-216ENST00000561206 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.82
USP8-216ENST00000561206 NEDD1Q8NHV4 660 aa9.9□□□□□ -0.82
USP8-216ENST00000561206 ACDQ96AP0 544 aa9.9□□□□□ -0.82
USP8-216ENST00000561206 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
USP8-216ENST00000561206 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
USP8-216ENST00000561206 LYSMD3Q7Z3D4 306 aa9.88□□□□□ -0.83
USP8-216ENST00000561206 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
USP8-216ENST00000561206 ZNF395Q9H8N7 513 aaPredicted RBP9.88□□□□□ -0.83
USP8-216ENST00000561206 ADH1AP07327 375 aa9.87□□□□□ -0.83
USP8-216ENST00000561206 QPCTQ16769 361 aa9.87□□□□□ -0.83
USP8-216ENST00000561206 BARGINQ6ZT62 677 aa9.87□□□□□ -0.83
USP8-216ENST00000561206 FOXR1Q6PIV2 292 aa9.86□□□□□ -0.83
USP8-216ENST00000561206 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
USP8-216ENST00000561206 ARHGAP9Q9BRR9 750 aa9.86□□□□□ -0.83
USP8-216ENST00000561206 PTGIRP43119 386 aa9.85□□□□□ -0.83
USP8-216ENST00000561206 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
USP8-216ENST00000561206 TSC1Q92574 1164 aa9.85□□□□□ -0.83
USP8-216ENST00000561206 LIMD1Q9UGP4 676 aa9.85□□□□□ -0.83
USP8-216ENST00000561206 OIP5O43482 229 aa9.84□□□□□ -0.83
USP8-216ENST00000561206 LILRA1O75019 489 aa9.84□□□□□ -0.83
USP8-216ENST00000561206 RNF144AP50876 292 aaPredicted RBP9.83□□□□□ -0.84
USP8-216ENST00000561206 DBN1Q16643 649 aa9.83□□□□□ -0.84
USP8-216ENST00000561206 CSPP1Q1MSJ5 1256 aa9.83□□□□□ -0.84
USP8-216ENST00000561206 PARP9Q8IXQ6 854 aa9.83□□□□□ -0.84
USP8-216ENST00000561206 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 NUTM2BA6NNL0 878 aaPredicted RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 NUTM2EB1AL46 878 aaPredicted RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 GPR25O00155 361 aa9.82□□□□□ -0.84
USP8-216ENST00000561206 FURINP09958 794 aa9.82□□□□□ -0.84
USP8-216ENST00000561206 NUTM2DQ5VT03 806 aaPredicted RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
USP8-216ENST00000561206 ZMYND10O75800 440 aa9.81□□□□□ -0.84
USP8-216ENST00000561206 MYSM1Q5VVJ2 828 aa9.81□□□□□ -0.84
USP8-216ENST00000561206 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP8-216ENST00000561206 COL8A1P27658 744 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms