RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
KNSTRN-213ENST00000561169 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
KNSTRN-213ENST00000561169 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
KNSTRN-213ENST00000561169 ABCC6O95255 1503 aa23.68■■□□□ 1.38
KNSTRN-213ENST00000561169 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
KNSTRN-213ENST00000561169 FBLN1P23142 703 aa23.67■■□□□ 1.38
KNSTRN-213ENST00000561169 COG3Q96JB2 828 aa23.66■■□□□ 1.38
KNSTRN-213ENST00000561169 PANK3Q9H999 370 aa23.66■■□□□ 1.38
KNSTRN-213ENST00000561169 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
KNSTRN-213ENST00000561169 LARP1Q6PKG0 1096 aaKnown RBP23.65■■□□□ 1.38
KNSTRN-213ENST00000561169 WASHC2AQ641Q2 1341 aa23.65■■□□□ 1.38
KNSTRN-213ENST00000561169 WNK3Q9BYP7 1800 aa23.65■■□□□ 1.38
KNSTRN-213ENST00000561169 SPATA31A1Q5TZJ5 1347 aa23.64■■□□□ 1.37
KNSTRN-213ENST00000561169 MAP2P11137 1827 aaKnown RBP23.63■■□□□ 1.37
KNSTRN-213ENST00000561169 PEAK1Q9H792 1746 aa23.63■■□□□ 1.37
KNSTRN-213ENST00000561169 FAM98CQ17RN3 349 aaKnown RBP23.62■■□□□ 1.37
KNSTRN-213ENST00000561169 ONECUT3O60422 494 aaPredicted RBP23.61■■□□□ 1.37
KNSTRN-213ENST00000561169 EVA1CP58658 441 aa23.61■■□□□ 1.37
KNSTRN-213ENST00000561169 RGPD2P0DJD1 1756 aa23.61■■□□□ 1.37
KNSTRN-213ENST00000561169 CGNL1Q0VF96 1302 aa23.6■■□□□ 1.37
KNSTRN-213ENST00000561169 MAP3K19Q56UN5 1328 aa23.6■■□□□ 1.37
KNSTRN-213ENST00000561169 SEPT12Q8IYM1 358 aa23.59■■□□□ 1.37
KNSTRN-213ENST00000561169 CRB1P82279 1406 aa23.59■■□□□ 1.37
KNSTRN-213ENST00000561169 USP35Q9P2H5 1018 aa23.58■■□□□ 1.37
KNSTRN-213ENST00000561169 WDR17Q8IZU2 1322 aa23.57■■□□□ 1.36
KNSTRN-213ENST00000561169 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
KNSTRN-213ENST00000561169 PARP4Q9UKK3 1724 aaKnown RBP23.56■■□□□ 1.36
KNSTRN-213ENST00000561169 ERBB3P21860 1342 aa23.55■■□□□ 1.36
KNSTRN-213ENST00000561169 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
KNSTRN-213ENST00000561169 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
KNSTRN-213ENST00000561169 IP6K1Q92551 441 aa23.53■■□□□ 1.36
KNSTRN-213ENST00000561169 BLMP54132 1417 aaPredicted RBP23.53■■□□□ 1.36
KNSTRN-213ENST00000561169 HOXC9P31274 260 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 LRRC37A3O60309 1634 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 A0A0G2JS52 829 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 MYT1Q01538 1121 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 TOM1L2Q6ZVM7 507 aa23.52■■□□□ 1.36
KNSTRN-213ENST00000561169 RTL1A6NKG5 1358 aa23.51■■□□□ 1.35
KNSTRN-213ENST00000561169 ANKRD24Q8TF21 1146 aa23.51■■□□□ 1.35
KNSTRN-213ENST00000561169 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
KNSTRN-213ENST00000561169 CSB-PGBD3P0DP91 1061 aa23.5■■□□□ 1.35
KNSTRN-213ENST00000561169 AMER1Q5JTC6 1135 aaPredicted RBP23.5■■□□□ 1.35
KNSTRN-213ENST00000561169 EMILIN1Q9Y6C2 1016 aa23.5■■□□□ 1.35
KNSTRN-213ENST00000561169 NSD2O96028 1365 aa23.49■■□□□ 1.35
KNSTRN-213ENST00000561169 DISP2A7MBM2 1401 aa23.49■■□□□ 1.35
KNSTRN-213ENST00000561169 AMPHP49418 695 aa23.49■■□□□ 1.35
KNSTRN-213ENST00000561169 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.35
KNSTRN-213ENST00000561169 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
KNSTRN-213ENST00000561169 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
KNSTRN-213ENST00000561169 KNSTRNQ9Y448 316 aa23.48■■□□□ 1.35
KNSTRN-213ENST00000561169 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
KNSTRN-213ENST00000561169 KRT27Q7Z3Y8 459 aa23.47■■□□□ 1.35
KNSTRN-213ENST00000561169 THRAP3Q9Y2W1 955 aaKnown RBP23.47■■□□□ 1.35
KNSTRN-213ENST00000561169 FLT4P35916 1363 aa23.46■■□□□ 1.35
KNSTRN-213ENST00000561169 FAM182BQ5T319 152 aa23.45■■□□□ 1.34
KNSTRN-213ENST00000561169 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
KNSTRN-213ENST00000561169 HSP90AB2PQ58FF8 381 aa23.44■■□□□ 1.34
KNSTRN-213ENST00000561169 POLKQ9UBT6 870 aa23.44■■□□□ 1.34
KNSTRN-213ENST00000561169 INSRP06213 1382 aa23.43■■□□□ 1.34
KNSTRN-213ENST00000561169 KIF24Q5T7B8 1368 aa23.43■■□□□ 1.34
KNSTRN-213ENST00000561169 SMG6Q86US8 1419 aaKnown RBP23.41■■□□□ 1.34
KNSTRN-213ENST00000561169 SBF2Q86WG5 1849 aa23.41■■□□□ 1.34
KNSTRN-213ENST00000561169 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
KNSTRN-213ENST00000561169 MORC1Q86VD1 984 aa23.4■■□□□ 1.34
KNSTRN-213ENST00000561169 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
KNSTRN-213ENST00000561169 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.34
KNSTRN-213ENST00000561169 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.34
KNSTRN-213ENST00000561169 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.33
KNSTRN-213ENST00000561169 KAT6BQ8WYB5 2073 aa23.38■■□□□ 1.33
KNSTRN-213ENST00000561169 NPC1L1Q9UHC9 1359 aa23.37■■□□□ 1.33
KNSTRN-213ENST00000561169 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
KNSTRN-213ENST00000561169 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
KNSTRN-213ENST00000561169 TNS2Q63HR2 1409 aa23.36■■□□□ 1.33
KNSTRN-213ENST00000561169 MEGF6O75095 1541 aa23.36■■□□□ 1.33
KNSTRN-213ENST00000561169 USHBP1Q8N6Y0 703 aa23.36■■□□□ 1.33
KNSTRN-213ENST00000561169 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
KNSTRN-213ENST00000561169 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
KNSTRN-213ENST00000561169 DDB1Q16531 1140 aa23.34■■□□□ 1.33
KNSTRN-213ENST00000561169 CDCA7Q9BWT1 371 aaPredicted RBP23.34■■□□□ 1.33
KNSTRN-213ENST00000561169 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
KNSTRN-213ENST00000561169 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
KNSTRN-213ENST00000561169 IL2RBP14784 551 aa23.32■■□□□ 1.32
KNSTRN-213ENST00000561169 MARCH10Q8NA82 808 aaPredicted RBP23.31■■□□□ 1.32
KNSTRN-213ENST00000561169 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
KNSTRN-213ENST00000561169 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
KNSTRN-213ENST00000561169 PKD1L3Q7Z443 1732 aa23.28■■□□□ 1.32
KNSTRN-213ENST00000561169 FAM196AQ6ZSG2 479 aa23.27■■□□□ 1.32
KNSTRN-213ENST00000561169 EYA1Q99502 592 aa23.27■■□□□ 1.32
KNSTRN-213ENST00000561169 EXOC5O00471 708 aa23.27■■□□□ 1.31
KNSTRN-213ENST00000561169 TRIM37O94972 964 aa23.25■■□□□ 1.31
KNSTRN-213ENST00000561169 MTHFSP49914 203 aa23.25■■□□□ 1.31
KNSTRN-213ENST00000561169 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
KNSTRN-213ENST00000561169 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
KNSTRN-213ENST00000561169 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
KNSTRN-213ENST00000561169 BCL9O00512 1426 aa23.23■■□□□ 1.31
KNSTRN-213ENST00000561169 NHSQ6T4R5 1651 aa23.23■■□□□ 1.31
KNSTRN-213ENST00000561169 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
KNSTRN-213ENST00000561169 PTF1AQ7RTS3 328 aa23.23■■□□□ 1.31
KNSTRN-213ENST00000561169 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms