RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
SPG21-214ENST00000561088 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
SPG21-214ENST00000561088 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
SPG21-214ENST00000561088 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
SPG21-214ENST00000561088 EP400Q96L91 3159 aa17.1■□□□□ 0.33
SPG21-214ENST00000561088 LTN1O94822 1766 aa17.1■□□□□ 0.33
SPG21-214ENST00000561088 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
SPG21-214ENST00000561088 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
SPG21-214ENST00000561088 COL18A1P39060 1754 aa17.1■□□□□ 0.33
SPG21-214ENST00000561088 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
SPG21-214ENST00000561088 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
SPG21-214ENST00000561088 THRAP3Q9Y2W1 955 aaKnown RBP17.09■□□□□ 0.33
SPG21-214ENST00000561088 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.324e-8■■■■□ 26.7
SPG21-214ENST00000561088 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
SPG21-214ENST00000561088 COG3Q96JB2 828 aa17.08■□□□□ 0.32
SPG21-214ENST00000561088 ABCC6O95255 1503 aa17.07■□□□□ 0.32
SPG21-214ENST00000561088 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
SPG21-214ENST00000561088 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
SPG21-214ENST00000561088 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
SPG21-214ENST00000561088 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
SPG21-214ENST00000561088 MYOM1P52179 1685 aa17.06■□□□□ 0.32
SPG21-214ENST00000561088 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
SPG21-214ENST00000561088 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
SPG21-214ENST00000561088 PARP4Q9UKK3 1724 aaKnown RBP17.04■□□□□ 0.32
SPG21-214ENST00000561088 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
SPG21-214ENST00000561088 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
SPG21-214ENST00000561088 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
SPG21-214ENST00000561088 BAG6P46379 1132 aa17.02■□□□□ 0.32
SPG21-214ENST00000561088 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
SPG21-214ENST00000561088 NLRP2Q9NX02 1062 aa17.02■□□□□ 0.32
SPG21-214ENST00000561088 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
SPG21-214ENST00000561088 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
SPG21-214ENST00000561088 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
SPG21-214ENST00000561088 AMPHP49418 695 aa17■□□□□ 0.31
SPG21-214ENST00000561088 DDB1Q16531 1140 aa17■□□□□ 0.31
SPG21-214ENST00000561088 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
SPG21-214ENST00000561088 CDCA7Q9BWT1 371 aaPredicted RBP17■□□□□ 0.31
SPG21-214ENST00000561088 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
SPG21-214ENST00000561088 CCDC7Q96M83 1385 aa17■□□□□ 0.31
SPG21-214ENST00000561088 ERBB3P21860 1342 aa16.99■□□□□ 0.31
SPG21-214ENST00000561088 TRIM37O94972 964 aa16.99■□□□□ 0.31
SPG21-214ENST00000561088 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
SPG21-214ENST00000561088 FYB1O15117 783 aa16.98■□□□□ 0.31
SPG21-214ENST00000561088 TNS1Q9HBL0 1735 aaKnown RBP16.98■□□□□ 0.31
SPG21-214ENST00000561088 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
SPG21-214ENST00000561088 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
SPG21-214ENST00000561088 IP6K1Q92551 441 aa16.97■□□□□ 0.31
SPG21-214ENST00000561088 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
SPG21-214ENST00000561088 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.3
SPG21-214ENST00000561088 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
SPG21-214ENST00000561088 FBLN1P23142 703 aa16.95■□□□□ 0.3
SPG21-214ENST00000561088 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
SPG21-214ENST00000561088 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
SPG21-214ENST00000561088 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
SPG21-214ENST00000561088 EXOC5O00471 708 aa16.94■□□□□ 0.3
SPG21-214ENST00000561088 APBA3O96018 575 aa16.94■□□□□ 0.3
SPG21-214ENST00000561088 HOXC9P31274 260 aa16.94■□□□□ 0.3
SPG21-214ENST00000561088 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
SPG21-214ENST00000561088 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
SPG21-214ENST00000561088 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
SPG21-214ENST00000561088 IL2RBP14784 551 aa16.92■□□□□ 0.3
SPG21-214ENST00000561088 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
SPG21-214ENST00000561088 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
SPG21-214ENST00000561088 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
SPG21-214ENST00000561088 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
SPG21-214ENST00000561088 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
SPG21-214ENST00000561088 PANK3Q9H999 370 aa16.89■□□□□ 0.29
SPG21-214ENST00000561088 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.29
SPG21-214ENST00000561088 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
SPG21-214ENST00000561088 FLT4P35916 1363 aa16.89■□□□□ 0.29
SPG21-214ENST00000561088 ANKRD26Q9UPS8 1709 aa16.88■□□□□ 0.29
SPG21-214ENST00000561088 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
SPG21-214ENST00000561088 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
SPG21-214ENST00000561088 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
SPG21-214ENST00000561088 PSDA5PKW4 1024 aaPredicted RBP16.85■□□□□ 0.29
SPG21-214ENST00000561088 HSP90AB2PQ58FF8 381 aa16.85■□□□□ 0.29
SPG21-214ENST00000561088 CAMKK2Q96RR4 588 aa16.85■□□□□ 0.29
SPG21-214ENST00000561088 INSRP06213 1382 aa16.85■□□□□ 0.29
SPG21-214ENST00000561088 KIF24Q5T7B8 1368 aa16.85■□□□□ 0.29
SPG21-214ENST00000561088 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
SPG21-214ENST00000561088 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
SPG21-214ENST00000561088 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
SPG21-214ENST00000561088 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
SPG21-214ENST00000561088 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
SPG21-214ENST00000561088 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
SPG21-214ENST00000561088 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
SPG21-214ENST00000561088 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
SPG21-214ENST00000561088 RREB1Q92766 1687 aa16.83■□□□□ 0.28
SPG21-214ENST00000561088 BCL9O00512 1426 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 NSD2O96028 1365 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
SPG21-214ENST00000561088 R3HDM1Q15032 1099 aaKnown RBP16.81■□□□□ 0.28
SPG21-214ENST00000561088 NBPF14Q5TI25 921 aa16.81■□□□□ 0.28
SPG21-214ENST00000561088 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SPG21-214ENST00000561088 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
SPG21-214ENST00000561088 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
SPG21-214ENST00000561088 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms