RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 SPINT1O43278 529 aa9.32□□□□□ -0.92
AP4E1-204ENST00000561004 LYPD8Q6UX82 237 aa9.32□□□□□ -0.92
AP4E1-204ENST00000561004 CCDC116Q8IYX3 515 aa9.32□□□□□ -0.92
AP4E1-204ENST00000561004 FSHRP23945 695 aa9.31□□□□□ -0.92
AP4E1-204ENST00000561004 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
AP4E1-204ENST00000561004 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
AP4E1-204ENST00000561004 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
AP4E1-204ENST00000561004 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
AP4E1-204ENST00000561004 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
AP4E1-204ENST00000561004 BAG6P46379 1132 aa9.29□□□□□ -0.92
AP4E1-204ENST00000561004 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
AP4E1-204ENST00000561004 ITGB2P05107 769 aa9.27□□□□□ -0.93
AP4E1-204ENST00000561004 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
AP4E1-204ENST00000561004 Q6ZVU0 165 aa9.27□□□□□ -0.93
AP4E1-204ENST00000561004 SH3RF1Q7Z6J0 888 aa9.27□□□□□ -0.93
AP4E1-204ENST00000561004 KRTAP1-3Q8IUG1 177 aa9.27□□□□□ -0.93
AP4E1-204ENST00000561004 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
AP4E1-204ENST00000561004 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
AP4E1-204ENST00000561004 BCRP11274 1271 aa9.25□□□□□ -0.93
AP4E1-204ENST00000561004 SPIRE2Q8WWL2 714 aa9.25□□□□□ -0.93
AP4E1-204ENST00000561004 MBIPQ9NS73 344 aa9.25□□□□□ -0.93
AP4E1-204ENST00000561004 GJA5P36382 358 aa9.24□□□□□ -0.93
AP4E1-204ENST00000561004 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
AP4E1-204ENST00000561004 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
AP4E1-204ENST00000561004 NBPF14Q5TI25 921 aa9.23□□□□□ -0.93
AP4E1-204ENST00000561004 F12P00748 615 aaPredicted RBP9.22□□□□□ -0.93
AP4E1-204ENST00000561004 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.94
AP4E1-204ENST00000561004 NDUFV2P19404 249 aa9.21□□□□□ -0.94
AP4E1-204ENST00000561004 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
AP4E1-204ENST00000561004 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
AP4E1-204ENST00000561004 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
AP4E1-204ENST00000561004 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
AP4E1-204ENST00000561004 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
AP4E1-204ENST00000561004 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
AP4E1-204ENST00000561004 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
AP4E1-204ENST00000561004 FURINP09958 794 aa9.19□□□□□ -0.94
AP4E1-204ENST00000561004 CDV3Q9UKY7 258 aaKnown RBP9.19□□□□□ -0.94
AP4E1-204ENST00000561004 BTBD11A6QL63 1104 aa9.18□□□□□ -0.94
AP4E1-204ENST00000561004 IGF1RP08069 1367 aa9.18□□□□□ -0.94
AP4E1-204ENST00000561004 GAS6Q14393 721 aa9.18□□□□□ -0.94
AP4E1-204ENST00000561004 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
AP4E1-204ENST00000561004 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
AP4E1-204ENST00000561004 CTSOP43234 321 aaPredicted RBP9.17□□□□□ -0.94
AP4E1-204ENST00000561004 CBLBQ13191 982 aa9.17□□□□□ -0.94
AP4E1-204ENST00000561004 LCE3BQ5TA77 95 aa9.16□□□□□ -0.94
AP4E1-204ENST00000561004 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
AP4E1-204ENST00000561004 RNF217Q8TC41 542 aa9.15□□□□□ -0.94
AP4E1-204ENST00000561004 GPKOWQ92917 476 aaPredicted RBP eCLIP9.15□□□□□ -0.94
AP4E1-204ENST00000561004 INSM2Q96T92 566 aaPredicted RBP9.15□□□□□ -0.94
AP4E1-204ENST00000561004 ZBTB3Q9H5J0 574 aa9.15□□□□□ -0.94
AP4E1-204ENST00000561004 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
AP4E1-204ENST00000561004 MAGEB6P1A0A0J9YX57 407 aa9.14□□□□□ -0.95
AP4E1-204ENST00000561004 PIK3R2O00459 728 aa9.14□□□□□ -0.95
AP4E1-204ENST00000561004 RELBQ01201 579 aa9.13□□□□□ -0.95
AP4E1-204ENST00000561004 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
AP4E1-204ENST00000561004 TRERF1Q96PN7 1200 aa9.13□□□□□ -0.95
AP4E1-204ENST00000561004 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
AP4E1-204ENST00000561004 PRPF38BQ5VTL8 546 aaKnown RBP9.12□□□□□ -0.95
AP4E1-204ENST00000561004 SH3BP5LQ7L8J4 393 aa9.12□□□□□ -0.95
AP4E1-204ENST00000561004 TRIM22Q8IYM9 498 aa9.12□□□□□ -0.95
AP4E1-204ENST00000561004 CFAP99D6REC4 459 aa9.11□□□□□ -0.95
AP4E1-204ENST00000561004 H7C1W4 665 aa9.11□□□□□ -0.95
AP4E1-204ENST00000561004 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
AP4E1-204ENST00000561004 ACDQ96AP0 544 aa9.1□□□□□ -0.95
AP4E1-204ENST00000561004 OIP5O43482 229 aa9.09□□□□□ -0.95
AP4E1-204ENST00000561004 HRCP23327 699 aa9.08□□□□□ -0.96
AP4E1-204ENST00000561004 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
AP4E1-204ENST00000561004 ZNF837Q96EG3 531 aaPredicted RBP9.08□□□□□ -0.96
AP4E1-204ENST00000561004 AGBL1Q96MI9 1066 aa9.08□□□□□ -0.96
AP4E1-204ENST00000561004 KCTD15Q96SI1 283 aaPredicted RBP9.08□□□□□ -0.96
AP4E1-204ENST00000561004 MX2P20592 715 aa9.07□□□□□ -0.96
AP4E1-204ENST00000561004 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
AP4E1-204ENST00000561004 MAP2K3P46734 347 aa9.06□□□□□ -0.96
AP4E1-204ENST00000561004 ERFEQ4G0M1 354 aa9.06□□□□□ -0.96
AP4E1-204ENST00000561004 ZMYM1Q5SVZ6 1142 aa9.06□□□□□ -0.96
AP4E1-204ENST00000561004 CARD14Q9BXL6 1004 aa9.06□□□□□ -0.96
AP4E1-204ENST00000561004 ZNF395Q9H8N7 513 aaPredicted RBP9.05□□□□□ -0.96
AP4E1-204ENST00000561004 CUEDC1Q9NWM3 386 aaPredicted RBP9.05□□□□□ -0.96
AP4E1-204ENST00000561004 KRTAP4-12Q9BQ66 201 aa9.04□□□□□ -0.96
AP4E1-204ENST00000561004 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
AP4E1-204ENST00000561004 TSC1Q92574 1164 aa9.03□□□□□ -0.96
AP4E1-204ENST00000561004 BCANQ96GW7 911 aa9.03□□□□□ -0.96
AP4E1-204ENST00000561004 GPR25O00155 361 aa9.02□□□□□ -0.97
AP4E1-204ENST00000561004 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
AP4E1-204ENST00000561004 BEGAINQ9BUH8 593 aa9.02□□□□□ -0.97
AP4E1-204ENST00000561004 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
AP4E1-204ENST00000561004 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
AP4E1-204ENST00000561004 RRAGCQ9HB90 399 aa9.02□□□□□ -0.97
AP4E1-204ENST00000561004 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
AP4E1-204ENST00000561004 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
AP4E1-204ENST00000561004 ADH1AP07327 375 aa9.01□□□□□ -0.97
AP4E1-204ENST00000561004 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
AP4E1-204ENST00000561004 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
AP4E1-204ENST00000561004 HELBQ8NG08 1087 aaPredicted RBP9.01□□□□□ -0.97
AP4E1-204ENST00000561004 SEMA6BQ9H3T3 888 aa9.01□□□□□ -0.97
AP4E1-204ENST00000561004 PTGIRP43119 386 aa9□□□□□ -0.97
AP4E1-204ENST00000561004 DBN1Q16643 649 aa9□□□□□ -0.97
AP4E1-204ENST00000561004 PDXDC2PQ6P474 469 aa9□□□□□ -0.97
AP4E1-204ENST00000561004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
AP4E1-204ENST00000561004 ARHGAP9Q9BRR9 750 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms