RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
TPM1-225ENST00000560679 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
TPM1-225ENST00000560679 MARCH10Q8NA82 808 aaPredicted RBP14.57□□□□□ -0.08
TPM1-225ENST00000560679 USP6P35125 1406 aa14.57□□□□□ -0.08
TPM1-225ENST00000560679 CHD4Q14839 1912 aa14.56□□□□□ -0.08
TPM1-225ENST00000560679 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
TPM1-225ENST00000560679 DDB1Q16531 1140 aa14.56□□□□□ -0.08
TPM1-225ENST00000560679 STAC3Q96MF2 364 aa14.56□□□□□ -0.08
TPM1-225ENST00000560679 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
TPM1-225ENST00000560679 CPSF1Q10570 1443 aaKnown RBP14.56□□□□□ -0.08
TPM1-225ENST00000560679 RGPD5Q99666 1765 aa14.55□□□□□ -0.08
TPM1-225ENST00000560679 GOLGB1Q14789 3259 aaKnown RBP14.55□□□□□ -0.08
TPM1-225ENST00000560679 FHDC1Q9C0D6 1143 aaPredicted RBP14.55□□□□□ -0.08
TPM1-225ENST00000560679 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
TPM1-225ENST00000560679 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
TPM1-225ENST00000560679 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
TPM1-225ENST00000560679 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
TPM1-225ENST00000560679 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
TPM1-225ENST00000560679 WDR17Q8IZU2 1322 aa14.54□□□□□ -0.08
TPM1-225ENST00000560679 TRPM1Q7Z4N2 1603 aa14.53□□□□□ -0.08
TPM1-225ENST00000560679 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
TPM1-225ENST00000560679 SYT17Q9BSW7 474 aa14.53□□□□□ -0.08
TPM1-225ENST00000560679 TNS2Q63HR2 1409 aa14.52□□□□□ -0.08
TPM1-225ENST00000560679 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
TPM1-225ENST00000560679 SLC15A2Q16348 729 aa14.52□□□□□ -0.09
TPM1-225ENST00000560679 TXNRD1Q16881 649 aa14.52□□□□□ -0.09
TPM1-225ENST00000560679 CEP350Q5VT06 3117 aa14.52□□□□□ -0.09
TPM1-225ENST00000560679 NFAT5O94916 1531 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 NLRP6P59044 892 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 C1QTNF8P60827 252 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 MTFR1LQ9H019 292 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 ABCC6O95255 1503 aa14.51□□□□□ -0.09
TPM1-225ENST00000560679 MAP3K5Q99683 1374 aa14.5□□□□□ -0.09
TPM1-225ENST00000560679 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
TPM1-225ENST00000560679 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
TPM1-225ENST00000560679 BTAF1O14981 1849 aa14.48□□□□□ -0.09
TPM1-225ENST00000560679 CENPJQ9HC77 1338 aaPredicted RBP14.48□□□□□ -0.09
TPM1-225ENST00000560679 ARHGEF25Q86VW2 580 aa14.48□□□□□ -0.09
TPM1-225ENST00000560679 CDCA7Q9BWT1 371 aaPredicted RBP14.48□□□□□ -0.09
TPM1-225ENST00000560679 CARD10Q9BWT7 1032 aa14.48□□□□□ -0.09
TPM1-225ENST00000560679 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
TPM1-225ENST00000560679 COL24A1Q17RW2 1714 aa14.47□□□□□ -0.09
TPM1-225ENST00000560679 SHANK3Q9BYB0 1731 aa14.46□□□□□ -0.09
TPM1-225ENST00000560679 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.1
TPM1-225ENST00000560679 ARXQ96QS3 562 aa14.45□□□□□ -0.1
TPM1-225ENST00000560679 TUBGCP6Q96RT7 1819 aa14.45□□□□□ -0.1
TPM1-225ENST00000560679 ZNF827Q17R98 1081 aa14.44□□□□□ -0.1
TPM1-225ENST00000560679 CCDC7Q96M83 1385 aa14.44□□□□□ -0.1
TPM1-225ENST00000560679 USP54Q70EL1 1684 aa14.43□□□□□ -0.1
TPM1-225ENST00000560679 TTC21BQ7Z4L5 1316 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 EXOC5O00471 708 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 SOX12O15370 315 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 ACSBG1Q96GR2 724 aa14.42□□□□□ -0.1
TPM1-225ENST00000560679 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
TPM1-225ENST00000560679 LRRC4BQ9NT99 713 aa14.41□□□□□ -0.1
TPM1-225ENST00000560679 KCNH5Q8NCM2 988 aa14.4□□□□□ -0.1
TPM1-225ENST00000560679 LTN1O94822 1766 aa14.39□□□□□ -0.11
TPM1-225ENST00000560679 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
TPM1-225ENST00000560679 ERBB3P21860 1342 aa14.39□□□□□ -0.11
TPM1-225ENST00000560679 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
TPM1-225ENST00000560679 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
TPM1-225ENST00000560679 GPR162Q16538 588 aa14.37□□□□□ -0.11
TPM1-225ENST00000560679 PNPLA7Q6ZV29 1317 aa14.37□□□□□ -0.11
TPM1-225ENST00000560679 EVC2Q86UK5 1308 aa14.37□□□□□ -0.11
TPM1-225ENST00000560679 NLGN2Q8NFZ4 835 aa14.36□□□□□ -0.11
TPM1-225ENST00000560679 LY75O60449 1722 aa14.35□□□□□ -0.11
TPM1-225ENST00000560679 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
TPM1-225ENST00000560679 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
TPM1-225ENST00000560679 KTN1Q86UP2 1357 aaKnown RBP14.34□□□□□ -0.11
TPM1-225ENST00000560679 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
TPM1-225ENST00000560679 IL2RBP14784 551 aa14.34□□□□□ -0.11
TPM1-225ENST00000560679 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
TPM1-225ENST00000560679 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
TPM1-225ENST00000560679 NLRP2Q9NX02 1062 aa14.33□□□□□ -0.12
TPM1-225ENST00000560679 NSD2O96028 1365 aa14.33□□□□□ -0.12
TPM1-225ENST00000560679 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
TPM1-225ENST00000560679 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
TPM1-225ENST00000560679 SLC16A10Q8TF71 515 aa14.32□□□□□ -0.12
TPM1-225ENST00000560679 SBNO2Q9Y2G9 1366 aa14.32□□□□□ -0.12
TPM1-225ENST00000560679 FAM208AQ9UK61 1670 aaKnown RBP14.31□□□□□ -0.12
TPM1-225ENST00000560679 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
TPM1-225ENST00000560679 POLD1P28340 1107 aa14.3□□□□□ -0.12
TPM1-225ENST00000560679 KCNQ4P56696 695 aa14.3□□□□□ -0.12
TPM1-225ENST00000560679 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
TPM1-225ENST00000560679 ANKRD24Q8TF21 1146 aa14.3□□□□□ -0.12
TPM1-225ENST00000560679 NME9Q86XW9 330 aa14.29□□□□□ -0.12
TPM1-225ENST00000560679 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
TPM1-225ENST00000560679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
TPM1-225ENST00000560679 ADCY9O60503 1353 aa14.27□□□□□ -0.12
TPM1-225ENST00000560679 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
TPM1-225ENST00000560679 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.13
TPM1-225ENST00000560679 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.13
TPM1-225ENST00000560679 ROCK2O75116 1388 aaKnown RBP14.26□□□□□ -0.13
TPM1-225ENST00000560679 MEGF6O75095 1541 aa14.25□□□□□ -0.13
TPM1-225ENST00000560679 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
TPM1-225ENST00000560679 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms