RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
SNRPCP18-201ENST00000560619 RXRBP28702 533 aa15.22■□□□□ 0.03
SNRPCP18-201ENST00000560619 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
SNRPCP18-201ENST00000560619 IP6K1Q92551 441 aa15.22■□□□□ 0.03
SNRPCP18-201ENST00000560619 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
SNRPCP18-201ENST00000560619 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
SNRPCP18-201ENST00000560619 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
SNRPCP18-201ENST00000560619 EVA1CP58658 441 aa15.2■□□□□ 0.02
SNRPCP18-201ENST00000560619 THRAP3Q9Y2W1 955 aaKnown RBP15.2■□□□□ 0.02
SNRPCP18-201ENST00000560619 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
SNRPCP18-201ENST00000560619 MAP3K19Q56UN5 1328 aa15.19■□□□□ 0.02
SNRPCP18-201ENST00000560619 SPATA31A5Q5VU36 1347 aa15.19■□□□□ 0.02
SNRPCP18-201ENST00000560619 SPATA31A7Q8IWB4 1347 aa15.19■□□□□ 0.02
SNRPCP18-201ENST00000560619 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
SNRPCP18-201ENST00000560619 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
SNRPCP18-201ENST00000560619 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
SNRPCP18-201ENST00000560619 SOX12O15370 315 aa15.18■□□□□ 0.02
SNRPCP18-201ENST00000560619 AMPHP49418 695 aa15.18■□□□□ 0.02
SNRPCP18-201ENST00000560619 CRB1P82279 1406 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 FLT4P35916 1363 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 HOXC9P31274 260 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 ERBB3P21860 1342 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
SNRPCP18-201ENST00000560619 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
SNRPCP18-201ENST00000560619 FAM208AQ9UK61 1670 aaKnown RBP15.16■□□□□ 0.02
SNRPCP18-201ENST00000560619 INSRP06213 1382 aa15.16■□□□□ 0.02
SNRPCP18-201ENST00000560619 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
SNRPCP18-201ENST00000560619 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
SNRPCP18-201ENST00000560619 GLI3P10071 1580 aa15.15■□□□□ 0.02
SNRPCP18-201ENST00000560619 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
SNRPCP18-201ENST00000560619 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 RRS1Q15050 365 aaKnown RBP15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 STRN4Q9NRL3 753 aa15.14■□□□□ 0.01
SNRPCP18-201ENST00000560619 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
SNRPCP18-201ENST00000560619 FBLN1P23142 703 aa15.13■□□□□ 0.01
SNRPCP18-201ENST00000560619 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
SNRPCP18-201ENST00000560619 TOM1L2Q6ZVM7 507 aa15.13■□□□□ 0.01
SNRPCP18-201ENST00000560619 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
SNRPCP18-201ENST00000560619 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
SNRPCP18-201ENST00000560619 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
SNRPCP18-201ENST00000560619 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
SNRPCP18-201ENST00000560619 CC2D1BQ5T0F9 858 aaKnown RBP15.11■□□□□ 0.01
SNRPCP18-201ENST00000560619 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
SNRPCP18-201ENST00000560619 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
SNRPCP18-201ENST00000560619 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 RALBP1Q15311 655 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 ILDR2Q71H61 639 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 PLEKHG2Q9H7P9 1386 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 RGS12O14924 1447 aa15.09■□□□□ 0.01
SNRPCP18-201ENST00000560619 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
SNRPCP18-201ENST00000560619 SEPT12Q8IYM1 358 aa15.08■□□□□ 0
SNRPCP18-201ENST00000560619 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
SNRPCP18-201ENST00000560619 MTHFSP49914 203 aa15.07■□□□□ 0
SNRPCP18-201ENST00000560619 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
SNRPCP18-201ENST00000560619 NLRP2Q9NX02 1062 aa15.07■□□□□ 0
SNRPCP18-201ENST00000560619 NCAPD2Q15021 1401 aa15.07■□□□□ 0
SNRPCP18-201ENST00000560619 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
SNRPCP18-201ENST00000560619 DISP2A7MBM2 1401 aa15.06■□□□□ 0
SNRPCP18-201ENST00000560619 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
SNRPCP18-201ENST00000560619 USP35Q9P2H5 1018 aa15.05■□□□□ -0
SNRPCP18-201ENST00000560619 IL2RBP14784 551 aa15.04■□□□□ -0
SNRPCP18-201ENST00000560619 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
SNRPCP18-201ENST00000560619 NBPF4Q96M43 638 aa15.04■□□□□ -0
SNRPCP18-201ENST00000560619 PPP2R1AP30153 589 aa15.03■□□□□ -0
SNRPCP18-201ENST00000560619 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
SNRPCP18-201ENST00000560619 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
SNRPCP18-201ENST00000560619 BRWD3Q6RI45 1802 aa15.03■□□□□ -0
SNRPCP18-201ENST00000560619 IL13P35225 146 aa15.02■□□□□ -0
SNRPCP18-201ENST00000560619 KRT27Q7Z3Y8 459 aa15.02■□□□□ -0
SNRPCP18-201ENST00000560619 CFAP53Q96M91 514 aa15.02■□□□□ -0
SNRPCP18-201ENST00000560619 EYA1Q99502 592 aa15.02■□□□□ -0
SNRPCP18-201ENST00000560619 BCL9O00512 1426 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 IGSF1Q8N6C5 1336 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 EXOC5O00471 708 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 PDE3BQ13370 1112 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 DDB1Q16531 1140 aa15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNRPCP18-201ENST00000560619 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
SNRPCP18-201ENST00000560619 KDRP35968 1356 aa14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 RAPGEF4Q8WZA2 1011 aa14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 COL3A1P02461 1466 aaPredicted RBP14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
SNRPCP18-201ENST00000560619 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 A0A0G2JS52 829 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 SOCS7O14512 581 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 MYT1Q01538 1121 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 TNS2Q63HR2 1409 aa14.98□□□□□ -0.01
SNRPCP18-201ENST00000560619 TATP17735 454 aaPredicted RBP14.97□□□□□ -0.01
SNRPCP18-201ENST00000560619 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms