RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 COL14A1Q05707 1796 aaKnown RBP16.98■□□□□ 0.31
ALDH1A3-206ENST00000560555 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
ALDH1A3-206ENST00000560555 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
ALDH1A3-206ENST00000560555 CPDO75976 1380 aa16.98■□□□□ 0.31
ALDH1A3-206ENST00000560555 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
ALDH1A3-206ENST00000560555 FYB1O15117 783 aa16.97■□□□□ 0.31
ALDH1A3-206ENST00000560555 APBA3O96018 575 aa16.97■□□□□ 0.31
ALDH1A3-206ENST00000560555 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
ALDH1A3-206ENST00000560555 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.31
ALDH1A3-206ENST00000560555 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.31
ALDH1A3-206ENST00000560555 NFAT5O94916 1531 aa16.96■□□□□ 0.31
ALDH1A3-206ENST00000560555 FBLN1P23142 703 aa16.96■□□□□ 0.31
ALDH1A3-206ENST00000560555 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
ALDH1A3-206ENST00000560555 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
ALDH1A3-206ENST00000560555 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.3
ALDH1A3-206ENST00000560555 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.3
ALDH1A3-206ENST00000560555 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.3
ALDH1A3-206ENST00000560555 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
ALDH1A3-206ENST00000560555 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
ALDH1A3-206ENST00000560555 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
ALDH1A3-206ENST00000560555 ARHGEF25Q86VW2 580 aa16.95■□□□□ 0.3
ALDH1A3-206ENST00000560555 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
ALDH1A3-206ENST00000560555 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
ALDH1A3-206ENST00000560555 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
ALDH1A3-206ENST00000560555 KCNQ2O43526 872 aa16.93■□□□□ 0.3
ALDH1A3-206ENST00000560555 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
ALDH1A3-206ENST00000560555 PRDM11Q9NQV5 511 aa16.93■□□□□ 0.3
ALDH1A3-206ENST00000560555 PANK3Q9H999 370 aa16.92■□□□□ 0.3
ALDH1A3-206ENST00000560555 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
ALDH1A3-206ENST00000560555 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
ALDH1A3-206ENST00000560555 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
ALDH1A3-206ENST00000560555 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
ALDH1A3-206ENST00000560555 SOX12O15370 315 aa16.89■□□□□ 0.29
ALDH1A3-206ENST00000560555 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
ALDH1A3-206ENST00000560555 KCNH5Q8NCM2 988 aa16.89■□□□□ 0.29
ALDH1A3-206ENST00000560555 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
ALDH1A3-206ENST00000560555 NSD3Q9BZ95 1437 aa16.88■□□□□ 0.29
ALDH1A3-206ENST00000560555 LTN1O94822 1766 aa16.88■□□□□ 0.29
ALDH1A3-206ENST00000560555 KIF20BQ96Q89 1820 aa16.88■□□□□ 0.29
ALDH1A3-206ENST00000560555 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
ALDH1A3-206ENST00000560555 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
ALDH1A3-206ENST00000560555 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
ALDH1A3-206ENST00000560555 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
ALDH1A3-206ENST00000560555 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
ALDH1A3-206ENST00000560555 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
ALDH1A3-206ENST00000560555 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
ALDH1A3-206ENST00000560555 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
ALDH1A3-206ENST00000560555 COG3Q96JB2 828 aa16.83■□□□□ 0.28
ALDH1A3-206ENST00000560555 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
ALDH1A3-206ENST00000560555 ZBTB7CA1YPR0 619 aa16.82■□□□□ 0.28
ALDH1A3-206ENST00000560555 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
ALDH1A3-206ENST00000560555 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
ALDH1A3-206ENST00000560555 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
ALDH1A3-206ENST00000560555 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
ALDH1A3-206ENST00000560555 IP6K1Q92551 441 aa16.81■□□□□ 0.28
ALDH1A3-206ENST00000560555 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
ALDH1A3-206ENST00000560555 EVA1CP58658 441 aa16.8■□□□□ 0.28
ALDH1A3-206ENST00000560555 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
ALDH1A3-206ENST00000560555 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
ALDH1A3-206ENST00000560555 ABCC6O95255 1503 aa16.79■□□□□ 0.28
ALDH1A3-206ENST00000560555 RREB1Q92766 1687 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 HOXC9P31274 260 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 NUP188Q5SRE5 1749 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 CRB1P82279 1406 aa16.78■□□□□ 0.28
ALDH1A3-206ENST00000560555 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
ALDH1A3-206ENST00000560555 ERBB3P21860 1342 aa16.76■□□□□ 0.27
ALDH1A3-206ENST00000560555 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
ALDH1A3-206ENST00000560555 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
ALDH1A3-206ENST00000560555 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
ALDH1A3-206ENST00000560555 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
ALDH1A3-206ENST00000560555 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
ALDH1A3-206ENST00000560555 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
ALDH1A3-206ENST00000560555 PTGER2P43116 358 aa16.74■□□□□ 0.27
ALDH1A3-206ENST00000560555 ANKRD24Q8TF21 1146 aa16.74■□□□□ 0.27
ALDH1A3-206ENST00000560555 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
ALDH1A3-206ENST00000560555 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
ALDH1A3-206ENST00000560555 WNK3Q9BYP7 1800 aa16.73■□□□□ 0.27
ALDH1A3-206ENST00000560555 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
ALDH1A3-206ENST00000560555 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
ALDH1A3-206ENST00000560555 PLSCR1O15162 318 aa16.72■□□□□ 0.27
ALDH1A3-206ENST00000560555 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
ALDH1A3-206ENST00000560555 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
ALDH1A3-206ENST00000560555 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
ALDH1A3-206ENST00000560555 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
ALDH1A3-206ENST00000560555 PARP4Q9UKK3 1724 aaKnown RBP16.71■□□□□ 0.27
ALDH1A3-206ENST00000560555 AMPHP49418 695 aa16.71■□□□□ 0.27
ALDH1A3-206ENST00000560555 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
ALDH1A3-206ENST00000560555 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
ALDH1A3-206ENST00000560555 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
ALDH1A3-206ENST00000560555 NSD2O96028 1365 aa16.7■□□□□ 0.26
ALDH1A3-206ENST00000560555 INSRP06213 1382 aa16.7■□□□□ 0.26
ALDH1A3-206ENST00000560555 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
ALDH1A3-206ENST00000560555 TNNT2P45379 298 aaPredicted RBP16.7■□□□□ 0.26
ALDH1A3-206ENST00000560555 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
ALDH1A3-206ENST00000560555 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
ALDH1A3-206ENST00000560555 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
ALDH1A3-206ENST00000560555 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
ALDH1A3-206ENST00000560555 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms