RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 OVOS2A0A0J9YW53 1432 aa14.52□□□□□ -0.08
SNRPA1-212ENST00000560496 OVOS2Q6IE36 1432 aa14.52□□□□□ -0.08
SNRPA1-212ENST00000560496 KTN1Q86UP2 1357 aaKnown RBP14.52□□□□□ -0.08
SNRPA1-212ENST00000560496 TONSLQ96HA7 1378 aa14.52□□□□□ -0.08
SNRPA1-212ENST00000560496 PARD3Q8TEW0 1356 aa14.51□□□□□ -0.09
SNRPA1-212ENST00000560496 EVA1CP58658 441 aa14.51□□□□□ -0.09
SNRPA1-212ENST00000560496 FAM196AQ6ZSG2 479 aa14.51□□□□□ -0.09
SNRPA1-212ENST00000560496 NHSQ6T4R5 1651 aa14.51□□□□□ -0.09
SNRPA1-212ENST00000560496 USP31Q70CQ4 1352 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 WDR17Q8IZU2 1322 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 MYOM1P52179 1685 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 TRIM37O94972 964 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 EZH2Q15910 746 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
SNRPA1-212ENST00000560496 EDC4Q6P2E9 1401 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 A0A1W2PP64 1363 aa14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 CAMKK2Q96RR4 588 aa14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 CASZ1Q86V15 1759 aa14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
SNRPA1-212ENST00000560496 ZBTB7CA1YPR0 619 aa14.48□□□□□ -0.09
SNRPA1-212ENST00000560496 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
SNRPA1-212ENST00000560496 KIF20BQ96Q89 1820 aa14.47□□□□□ -0.09
SNRPA1-212ENST00000560496 BCL9O00512 1426 aa14.47□□□□□ -0.09
SNRPA1-212ENST00000560496 SHANK3Q9BYB0 1731 aa14.46□□□□□ -0.09
SNRPA1-212ENST00000560496 KCNH5Q8NCM2 988 aa14.46□□□□□ -0.09
SNRPA1-212ENST00000560496 SOX12O15370 315 aa14.45□□□□□ -0.1
SNRPA1-212ENST00000560496 R3HDM1Q15032 1099 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-212ENST00000560496 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
SNRPA1-212ENST00000560496 APBA3O96018 575 aa14.44□□□□□ -0.1
SNRPA1-212ENST00000560496 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
SNRPA1-212ENST00000560496 PAPPAQ13219 1627 aa14.44□□□□□ -0.1
SNRPA1-212ENST00000560496 ERBB3P21860 1342 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 NME9Q86XW9 330 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 TESK2Q96S53 571 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 CCDC7Q96M83 1385 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 NINLQ9Y2I6 1382 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 BTAF1O14981 1849 aa14.43□□□□□ -0.1
SNRPA1-212ENST00000560496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNRPA1-212ENST00000560496 DOT1LQ8TEK3 1739 aa14.41□□□□□ -0.1
SNRPA1-212ENST00000560496 DDB1Q16531 1140 aa14.41□□□□□ -0.1
SNRPA1-212ENST00000560496 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
SNRPA1-212ENST00000560496 SLC12A5Q9H2X9 1139 aa14.41□□□□□ -0.1
SNRPA1-212ENST00000560496 MARCH10Q8NA82 808 aaPredicted RBP14.4□□□□□ -0.1
SNRPA1-212ENST00000560496 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-212ENST00000560496 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
SNRPA1-212ENST00000560496 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-212ENST00000560496 PTF1AQ7RTS3 328 aa14.39□□□□□ -0.11
SNRPA1-212ENST00000560496 HDGFL2Q7Z4V5 671 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-212ENST00000560496 ANKRD36BQ8N2N9 1353 aa14.38□□□□□ -0.11
SNRPA1-212ENST00000560496 USP47Q96K76 1375 aa14.38□□□□□ -0.11
SNRPA1-212ENST00000560496 TMC1Q8TDI8 760 aa14.38□□□□□ -0.11
SNRPA1-212ENST00000560496 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-212ENST00000560496 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SNRPA1-212ENST00000560496 CSB-PGBD3P0DP91 1061 aa14.37□□□□□ -0.11
SNRPA1-212ENST00000560496 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-212ENST00000560496 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-212ENST00000560496 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
SNRPA1-212ENST00000560496 QSER1Q2KHR3 1735 aa14.36□□□□□ -0.11
SNRPA1-212ENST00000560496 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
SNRPA1-212ENST00000560496 PLSCR1O15162 318 aa14.35□□□□□ -0.11
SNRPA1-212ENST00000560496 ANKRD24Q8TF21 1146 aa14.34□□□□□ -0.11
SNRPA1-212ENST00000560496 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-212ENST00000560496 LY75O60449 1722 aa14.34□□□□□ -0.11
SNRPA1-212ENST00000560496 RTL1A6NKG5 1358 aa14.33□□□□□ -0.12
SNRPA1-212ENST00000560496 MEGF6O75095 1541 aa14.32□□□□□ -0.12
SNRPA1-212ENST00000560496 NBPF14Q5TI25 921 aa14.31□□□□□ -0.12
SNRPA1-212ENST00000560496 PROM2Q8N271 834 aa14.31□□□□□ -0.12
SNRPA1-212ENST00000560496 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
SNRPA1-212ENST00000560496 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
SNRPA1-212ENST00000560496 MAP3K19Q56UN5 1328 aa14.31□□□□□ -0.12
SNRPA1-212ENST00000560496 UTRNP46939 3433 aa14.3□□□□□ -0.12
SNRPA1-212ENST00000560496 TOGARAM1Q9Y4F4 1720 aa14.3□□□□□ -0.12
SNRPA1-212ENST00000560496 EXOC5O00471 708 aa14.3□□□□□ -0.12
SNRPA1-212ENST00000560496 IL2RBP14784 551 aa14.3□□□□□ -0.12
SNRPA1-212ENST00000560496 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
SNRPA1-212ENST00000560496 KCNQ2O43526 872 aa14.29□□□□□ -0.12
SNRPA1-212ENST00000560496 IP6K1Q92551 441 aa14.29□□□□□ -0.12
SNRPA1-212ENST00000560496 HOXC9P31274 260 aa14.28□□□□□ -0.12
SNRPA1-212ENST00000560496 MAPK8IP2Q13387 824 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-212ENST00000560496 FBLN1P23142 703 aa14.27□□□□□ -0.13
SNRPA1-212ENST00000560496 TMF1P82094 1093 aa14.27□□□□□ -0.13
SNRPA1-212ENST00000560496 COG3Q96JB2 828 aa14.27□□□□□ -0.13
SNRPA1-212ENST00000560496 PDGFDQ9GZP0 370 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-212ENST00000560496 NSD2O96028 1365 aa14.26□□□□□ -0.13
SNRPA1-212ENST00000560496 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
SNRPA1-212ENST00000560496 TXNRD1Q16881 649 aa14.26□□□□□ -0.13
SNRPA1-212ENST00000560496 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
SNRPA1-212ENST00000560496 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
SNRPA1-212ENST00000560496 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
SNRPA1-212ENST00000560496 C5P01031 1676 aa14.25□□□□□ -0.13
SNRPA1-212ENST00000560496 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-212ENST00000560496 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
SNRPA1-212ENST00000560496 FYB1O15117 783 aa14.24□□□□□ -0.13
SNRPA1-212ENST00000560496 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
SNRPA1-212ENST00000560496 ITGB4P16144 1822 aa14.24□□□□□ -0.13
SNRPA1-212ENST00000560496 TAF1LQ8IZX4 1826 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms