RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
SPG11-222ENST00000560435 CNTNAP3BQ96NU0 1288 aa8.13□□□□□ -1.11
SPG11-222ENST00000560435 CNTNAP3Q9BZ76 1288 aa8.13□□□□□ -1.11
SPG11-222ENST00000560435 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
SPG11-222ENST00000560435 Q6ZVU0 165 aa8.12□□□□□ -1.11
SPG11-222ENST00000560435 TMEM151AQ8N4L1 468 aa8.12□□□□□ -1.11
SPG11-222ENST00000560435 CARD14Q9BXL6 1004 aa8.12□□□□□ -1.11
SPG11-222ENST00000560435 SPINT1O43278 529 aa8.11□□□□□ -1.11
SPG11-222ENST00000560435 RASSF7Q02833 373 aa8.11□□□□□ -1.11
SPG11-222ENST00000560435 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
SPG11-222ENST00000560435 PPP1R26Q5T8A7 1209 aaPredicted RBP8.11□□□□□ -1.11
SPG11-222ENST00000560435 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
SPG11-222ENST00000560435 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
SPG11-222ENST00000560435 CLK2P49760 499 aaKnown RBP8.1□□□□□ -1.11
SPG11-222ENST00000560435 CCDC155Q8N6L0 562 aa8.1□□□□□ -1.11
SPG11-222ENST00000560435 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
SPG11-222ENST00000560435 GDF11O95390 407 aa8.09□□□□□ -1.11
SPG11-222ENST00000560435 PDE4DQ08499 809 aa8.09□□□□□ -1.11
SPG11-222ENST00000560435 CBLBQ13191 982 aa8.09□□□□□ -1.11
SPG11-222ENST00000560435 CDV3Q9UKY7 258 aaKnown RBP8.09□□□□□ -1.11
SPG11-222ENST00000560435 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
SPG11-222ENST00000560435 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
SPG11-222ENST00000560435 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
SPG11-222ENST00000560435 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
SPG11-222ENST00000560435 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
SPG11-222ENST00000560435 SLC10A4Q96EP9 437 aa8.07□□□□□ -1.12
SPG11-222ENST00000560435 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
SPG11-222ENST00000560435 SVOPQ8N4V2 548 aa8.06□□□□□ -1.12
SPG11-222ENST00000560435 KCTD15Q96SI1 283 aaPredicted RBP8.06□□□□□ -1.12
SPG11-222ENST00000560435 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
SPG11-222ENST00000560435 ITGA6P23229 1130 aa8.05□□□□□ -1.12
SPG11-222ENST00000560435 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
SPG11-222ENST00000560435 FKBPLQ9UIM3 349 aa8.05□□□□□ -1.12
SPG11-222ENST00000560435 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
SPG11-222ENST00000560435 CTDSPL2Q05D32 466 aa8.04□□□□□ -1.12
SPG11-222ENST00000560435 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
SPG11-222ENST00000560435 CTSOP43234 321 aaPredicted RBP8.03□□□□□ -1.12
SPG11-222ENST00000560435 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
SPG11-222ENST00000560435 SV2AQ7L0J3 742 aa8.03□□□□□ -1.12
SPG11-222ENST00000560435 VWA5B2Q8N398 1253 aa8.03□□□□□ -1.12
SPG11-222ENST00000560435 ZBTB33Q86T24 672 aa8.02□□□□□ -1.13
SPG11-222ENST00000560435 WHAMMQ8TF30 809 aa8.02□□□□□ -1.13
SPG11-222ENST00000560435 AGBL1Q96MI9 1066 aa8.02□□□□□ -1.13
SPG11-222ENST00000560435 CDC14CA4D256 554 aa8.01□□□□□ -1.13
SPG11-222ENST00000560435 RELBQ01201 579 aa8.01□□□□□ -1.13
SPG11-222ENST00000560435 RNF217Q8TC41 542 aa8.01□□□□□ -1.13
SPG11-222ENST00000560435 INSM2Q96T92 566 aaPredicted RBP8.01□□□□□ -1.13
SPG11-222ENST00000560435 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
SPG11-222ENST00000560435 DNMT3AQ9Y6K1 912 aaPredicted RBP8.01□□□□□ -1.13
SPG11-222ENST00000560435 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
SPG11-222ENST00000560435 POLMQ9NP87 494 aaPredicted RBP8□□□□□ -1.13
SPG11-222ENST00000560435 GPSM3Q9Y4H4 160 aa8□□□□□ -1.13
SPG11-222ENST00000560435 SENP3-EIF4A1A0A087X0R7 540 aa7.99□□□□□ -1.13
SPG11-222ENST00000560435 PTK2Q05397 1052 aa7.99□□□□□ -1.13
SPG11-222ENST00000560435 KANK3Q6NY19 840 aa7.99□□□□□ -1.13
SPG11-222ENST00000560435 OCSTAMPQ9BR26 566 aa7.99□□□□□ -1.13
SPG11-222ENST00000560435 IGHA1P01876 353 aa7.98□□□□□ -1.13
SPG11-222ENST00000560435 IRS1P35568 1242 aa7.98□□□□□ -1.13
SPG11-222ENST00000560435 NR6A1Q15406 480 aa7.98□□□□□ -1.13
SPG11-222ENST00000560435 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
SPG11-222ENST00000560435 ADH1AP07327 375 aa7.97□□□□□ -1.13
SPG11-222ENST00000560435 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
SPG11-222ENST00000560435 FOXD4L5Q5VV16 416 aaPredicted RBP7.97□□□□□ -1.13
SPG11-222ENST00000560435 ADAM32Q8TC27 787 aa7.97□□□□□ -1.13
SPG11-222ENST00000560435 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
SPG11-222ENST00000560435 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
SPG11-222ENST00000560435 SLC24A3Q9HC58 644 aa7.97□□□□□ -1.13
SPG11-222ENST00000560435 ADAMTS2O95450 1211 aa7.96□□□□□ -1.14
SPG11-222ENST00000560435 FOXK2Q01167 660 aa7.96□□□□□ -1.14
SPG11-222ENST00000560435 SRSF11Q05519 484 aaKnown RBP7.96□□□□□ -1.14
SPG11-222ENST00000560435 ZNF784Q8NCA9 323 aaPredicted RBP7.96□□□□□ -1.14
SPG11-222ENST00000560435 GPAT2Q6NUI2 795 aa7.95□□□□□ -1.14
SPG11-222ENST00000560435 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
SPG11-222ENST00000560435 LILRA1O75019 489 aa7.94□□□□□ -1.14
SPG11-222ENST00000560435 PTGIRP43119 386 aa7.94□□□□□ -1.14
SPG11-222ENST00000560435 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
SPG11-222ENST00000560435 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
SPG11-222ENST00000560435 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
SPG11-222ENST00000560435 LYPD4Q6UWN0 246 aa7.94□□□□□ -1.14
SPG11-222ENST00000560435 MAP3K10Q02779 954 aa7.93□□□□□ -1.14
SPG11-222ENST00000560435 GAS6Q14393 721 aa7.93□□□□□ -1.14
SPG11-222ENST00000560435 LYSMD3Q7Z3D4 306 aa7.93□□□□□ -1.14
SPG11-222ENST00000560435 KDF1Q8NAX2 398 aaPredicted RBP7.93□□□□□ -1.14
SPG11-222ENST00000560435 PNMA1Q8ND90 353 aa7.93□□□□□ -1.14
SPG11-222ENST00000560435 ERVH48-1M5A8F1 160 aa7.92□□□□□ -1.14
SPG11-222ENST00000560435 ADD1P35611 737 aaKnown RBP7.92□□□□□ -1.14
SPG11-222ENST00000560435 SH3D19Q5HYK7 790 aa7.92□□□□□ -1.14
SPG11-222ENST00000560435 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.92□□□□□ -1.14
SPG11-222ENST00000560435 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
SPG11-222ENST00000560435 ESPNB1AK53 854 aa7.91□□□□□ -1.14
SPG11-222ENST00000560435 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
SPG11-222ENST00000560435 RAB15P59190 212 aa7.91□□□□□ -1.14
SPG11-222ENST00000560435 DZIP3Q86Y13 1208 aaKnown RBP7.91□□□□□ -1.14
SPG11-222ENST00000560435 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
SPG11-222ENST00000560435 AP1G2O75843 785 aa7.89□□□□□ -1.15
SPG11-222ENST00000560435 RNF144AP50876 292 aaPredicted RBP7.89□□□□□ -1.15
SPG11-222ENST00000560435 SEPT12Q8IYM1 358 aa7.89□□□□□ -1.15
SPG11-222ENST00000560435 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
SPG11-222ENST00000560435 EPS8L1Q8TE68 723 aa7.89□□□□□ -1.15
SPG11-222ENST00000560435 TRIM52Q96A61 297 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms