RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ATF5Q9Y2D1 282 aaPredicted RBP24.2■■□□□ 1.46
HERC1-207ENST00000560316 MYOM1P52179 1685 aa24.19■■□□□ 1.46
HERC1-207ENST00000560316 ZNF784Q8NCA9 323 aaPredicted RBP24.18■■□□□ 1.46
HERC1-207ENST00000560316 AXIN2Q9Y2T1 843 aa24.18■■□□□ 1.46
HERC1-207ENST00000560316 SLIT3O75094 1523 aa24.17■■□□□ 1.46
HERC1-207ENST00000560316 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
HERC1-207ENST00000560316 USP6P35125 1406 aa24.17■■□□□ 1.46
HERC1-207ENST00000560316 BRD4O60885 1362 aaPredicted RBP24.16■■□□□ 1.46
HERC1-207ENST00000560316 WDR17Q8IZU2 1322 aa24.15■■□□□ 1.46
HERC1-207ENST00000560316 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
HERC1-207ENST00000560316 STK32BQ9NY57 414 aa24.15■■□□□ 1.46
HERC1-207ENST00000560316 COL18A1P39060 1754 aa24.15■■□□□ 1.46
HERC1-207ENST00000560316 KIAA1210Q9ULL0 1709 aa24.15■■□□□ 1.46
HERC1-207ENST00000560316 TXNRD1Q16881 649 aa24.14■■□□□ 1.45
HERC1-207ENST00000560316 FHDC1Q9C0D6 1143 aaPredicted RBP24.14■■□□□ 1.45
HERC1-207ENST00000560316 UTRNP46939 3433 aa24.13■■□□□ 1.45
HERC1-207ENST00000560316 BCL9O00512 1426 aa24.13■■□□□ 1.45
HERC1-207ENST00000560316 WNK3Q9BYP7 1800 aa24.13■■□□□ 1.45
HERC1-207ENST00000560316 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
HERC1-207ENST00000560316 SYT17Q9BSW7 474 aa24.12■■□□□ 1.45
HERC1-207ENST00000560316 CDCA7Q9BWT1 371 aaPredicted RBP24.12■■□□□ 1.45
HERC1-207ENST00000560316 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
HERC1-207ENST00000560316 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
HERC1-207ENST00000560316 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
HERC1-207ENST00000560316 SOX12O15370 315 aa24.09■■□□□ 1.45
HERC1-207ENST00000560316 CSB-PGBD3P0DP91 1061 aa24.09■■□□□ 1.45
HERC1-207ENST00000560316 ARHGEF25Q86VW2 580 aa24.09■■□□□ 1.45
HERC1-207ENST00000560316 CARD10Q9BWT7 1032 aa24.08■■□□□ 1.45
HERC1-207ENST00000560316 EXOC5O00471 708 aa24.07■■□□□ 1.44
HERC1-207ENST00000560316 MTFR1LQ9H019 292 aa24.07■■□□□ 1.44
HERC1-207ENST00000560316 QRICH2Q9H0J4 1663 aa24.07■■□□□ 1.44
HERC1-207ENST00000560316 RGPD5Q99666 1765 aa24.06■■□□□ 1.44
HERC1-207ENST00000560316 SGIP1Q9BQI5 828 aa24.06■■□□□ 1.44
HERC1-207ENST00000560316 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
HERC1-207ENST00000560316 KCNH5Q8NCM2 988 aa24.03■■□□□ 1.44
HERC1-207ENST00000560316 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
HERC1-207ENST00000560316 ACSBG1Q96GR2 724 aa24.02■■□□□ 1.44
HERC1-207ENST00000560316 C1QTNF8P60827 252 aa24■■□□□ 1.43
HERC1-207ENST00000560316 ARXQ96QS3 562 aa24■■□□□ 1.43
HERC1-207ENST00000560316 TNS2Q63HR2 1409 aa24■■□□□ 1.43
HERC1-207ENST00000560316 CHD4Q14839 1912 aa24■■□□□ 1.43
HERC1-207ENST00000560316 EVC2Q86UK5 1308 aa23.99■■□□□ 1.43
HERC1-207ENST00000560316 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
HERC1-207ENST00000560316 NFAT5O94916 1531 aa23.97■■□□□ 1.43
HERC1-207ENST00000560316 NHSQ6T4R5 1651 aa23.97■■□□□ 1.43
HERC1-207ENST00000560316 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
HERC1-207ENST00000560316 ZNF692Q9BU19 519 aaPredicted RBP23.97■■□□□ 1.43
HERC1-207ENST00000560316 TTC21AQ8NDW8 1320 aa23.95■■□□□ 1.42
HERC1-207ENST00000560316 ZNF827Q17R98 1081 aa23.95■■□□□ 1.42
HERC1-207ENST00000560316 PAPPAQ13219 1627 aa23.95■■□□□ 1.42
HERC1-207ENST00000560316 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
HERC1-207ENST00000560316 GPR162Q16538 588 aa23.92■■□□□ 1.42
HERC1-207ENST00000560316 NLRP2Q9NX02 1062 aa23.92■■□□□ 1.42
HERC1-207ENST00000560316 ABCC6O95255 1503 aa23.92■■□□□ 1.42
HERC1-207ENST00000560316 LRRC4BQ9NT99 713 aa23.91■■□□□ 1.42
HERC1-207ENST00000560316 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
HERC1-207ENST00000560316 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
HERC1-207ENST00000560316 BTAF1O14981 1849 aa23.89■■□□□ 1.42
HERC1-207ENST00000560316 IL2RBP14784 551 aa23.89■■□□□ 1.41
HERC1-207ENST00000560316 ERBB3P21860 1342 aa23.88■■□□□ 1.41
HERC1-207ENST00000560316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.41
HERC1-207ENST00000560316 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
HERC1-207ENST00000560316 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
HERC1-207ENST00000560316 KAT6BQ8WYB5 2073 aa23.86■■□□□ 1.41
HERC1-207ENST00000560316 AKT1S1Q96B36 256 aa23.85■■□□□ 1.41
HERC1-207ENST00000560316 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
HERC1-207ENST00000560316 NME9Q86XW9 330 aa23.83■■□□□ 1.41
HERC1-207ENST00000560316 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.41
HERC1-207ENST00000560316 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
HERC1-207ENST00000560316 POLD1P28340 1107 aa23.82■■□□□ 1.4
HERC1-207ENST00000560316 SLC16A10Q8TF71 515 aa23.81■■□□□ 1.4
HERC1-207ENST00000560316 GOLGB1Q14789 3259 aaKnown RBP23.81■■□□□ 1.4
HERC1-207ENST00000560316 PNPLA7Q6ZV29 1317 aa23.81■■□□□ 1.4
HERC1-207ENST00000560316 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
HERC1-207ENST00000560316 KCNQ4P56696 695 aa23.8■■□□□ 1.4
HERC1-207ENST00000560316 MON2Q7Z3U7 1717 aa23.8■■□□□ 1.4
HERC1-207ENST00000560316 NLGN2Q8NFZ4 835 aa23.8■■□□□ 1.4
HERC1-207ENST00000560316 LTN1O94822 1766 aa23.79■■□□□ 1.4
HERC1-207ENST00000560316 DDX54Q8TDD1 881 aaKnown RBP23.79■■□□□ 1.4
HERC1-207ENST00000560316 SLC27A3Q5K4L6 730 aa23.78■■□□□ 1.4
HERC1-207ENST00000560316 TFCP2L1Q9NZI6 479 aa23.78■■□□□ 1.4
HERC1-207ENST00000560316 IFFO2Q5TF58 517 aa23.77■■□□□ 1.4
HERC1-207ENST00000560316 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
HERC1-207ENST00000560316 QSER1Q2KHR3 1735 aa23.76■■□□□ 1.39
HERC1-207ENST00000560316 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
HERC1-207ENST00000560316 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
HERC1-207ENST00000560316 SYTL4Q96C24 671 aaPredicted RBP23.75■■□□□ 1.39
HERC1-207ENST00000560316 COL24A1Q17RW2 1714 aa23.75■■□□□ 1.39
HERC1-207ENST00000560316 SHANK3Q9BYB0 1731 aa23.75■■□□□ 1.39
HERC1-207ENST00000560316 TUBGCP6Q96RT7 1819 aa23.74■■□□□ 1.39
HERC1-207ENST00000560316 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
HERC1-207ENST00000560316 LTV1Q96GA3 475 aaPredicted RBP23.73■■□□□ 1.39
HERC1-207ENST00000560316 SIN3AQ96ST3 1273 aa23.73■■□□□ 1.39
HERC1-207ENST00000560316 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
HERC1-207ENST00000560316 YBX3P16989 372 aaKnown RBP eCLIP23.72■■□□□ 1.39
HERC1-207ENST00000560316 PRIM1P49642 420 aaKnown RBP23.72■■□□□ 1.39
HERC1-207ENST00000560316 SLC12A5Q9H2X9 1139 aa23.7■■□□□ 1.38
HERC1-207ENST00000560316 HDGFL2Q7Z4V5 671 aaPredicted RBP23.69■■□□□ 1.38
HERC1-207ENST00000560316 IP6K1Q92551 441 aa23.69■■□□□ 1.38
HERC1-207ENST00000560316 ANKRD36BQ8N2N9 1353 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms