RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 RRS1Q15050 365 aaKnown RBP12.83□□□□□ -0.36
TUBBP8-201ENST00000560273 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
TUBBP8-201ENST00000560273 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
TUBBP8-201ENST00000560273 SLIT2O94813 1529 aa12.83□□□□□ -0.36
TUBBP8-201ENST00000560273 IP6K1Q92551 441 aa12.82□□□□□ -0.36
TUBBP8-201ENST00000560273 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
TUBBP8-201ENST00000560273 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
TUBBP8-201ENST00000560273 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
TUBBP8-201ENST00000560273 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
TUBBP8-201ENST00000560273 CSB-PGBD3P0DP91 1061 aa12.81□□□□□ -0.36
TUBBP8-201ENST00000560273 RXRBP28702 533 aa12.81□□□□□ -0.36
TUBBP8-201ENST00000560273 VPS72Q15906 364 aa12.81□□□□□ -0.36
TUBBP8-201ENST00000560273 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
TUBBP8-201ENST00000560273 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
TUBBP8-201ENST00000560273 HOXC9P31274 260 aa12.8□□□□□ -0.36
TUBBP8-201ENST00000560273 RBM6P78332 1123 aaKnown RBP12.8□□□□□ -0.36
TUBBP8-201ENST00000560273 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
TUBBP8-201ENST00000560273 NFAT5O94916 1531 aa12.79□□□□□ -0.36
TUBBP8-201ENST00000560273 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
TUBBP8-201ENST00000560273 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
TUBBP8-201ENST00000560273 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
TUBBP8-201ENST00000560273 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
TUBBP8-201ENST00000560273 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
TUBBP8-201ENST00000560273 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
TUBBP8-201ENST00000560273 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
TUBBP8-201ENST00000560273 USP35Q9P2H5 1018 aa12.78□□□□□ -0.36
TUBBP8-201ENST00000560273 ABCA3Q99758 1704 aa12.77□□□□□ -0.36
TUBBP8-201ENST00000560273 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
TUBBP8-201ENST00000560273 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
TUBBP8-201ENST00000560273 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
TUBBP8-201ENST00000560273 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.37
TUBBP8-201ENST00000560273 ATRNO75882 1429 aa12.77□□□□□ -0.37
TUBBP8-201ENST00000560273 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.37
TUBBP8-201ENST00000560273 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
TUBBP8-201ENST00000560273 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
TUBBP8-201ENST00000560273 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
TUBBP8-201ENST00000560273 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
TUBBP8-201ENST00000560273 FLT4P35916 1363 aa12.76□□□□□ -0.37
TUBBP8-201ENST00000560273 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 ERBB3P21860 1342 aa12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 MTHFSP49914 203 aa12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
TUBBP8-201ENST00000560273 INSRP06213 1382 aa12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 A0A0G2JS52 829 aa12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 MYT1Q01538 1121 aa12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
TUBBP8-201ENST00000560273 CRB1P82279 1406 aa12.73□□□□□ -0.37
TUBBP8-201ENST00000560273 RALBP1Q15311 655 aa12.73□□□□□ -0.37
TUBBP8-201ENST00000560273 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
TUBBP8-201ENST00000560273 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
TUBBP8-201ENST00000560273 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
TUBBP8-201ENST00000560273 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
TUBBP8-201ENST00000560273 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
TUBBP8-201ENST00000560273 ABCC6O95255 1503 aa12.72□□□□□ -0.37
TUBBP8-201ENST00000560273 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
TUBBP8-201ENST00000560273 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
TUBBP8-201ENST00000560273 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 PLCH1Q4KWH8 1693 aa12.7□□□□□ -0.38
TUBBP8-201ENST00000560273 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
TUBBP8-201ENST00000560273 COL18A1P39060 1754 aa12.69□□□□□ -0.38
TUBBP8-201ENST00000560273 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
TUBBP8-201ENST00000560273 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
TUBBP8-201ENST00000560273 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
TUBBP8-201ENST00000560273 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
TUBBP8-201ENST00000560273 ANP32CO43423 234 aa12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 IL2RBP14784 551 aa12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 IL13P35225 146 aa12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 EYA1Q99502 592 aa12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.67□□□□□ -0.38
TUBBP8-201ENST00000560273 CDK12Q9NYV4 1490 aaPredicted RBP12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 EXOC5O00471 708 aa12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 DDB1Q16531 1140 aa12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
TUBBP8-201ENST00000560273 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 GLI3P10071 1580 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 RGS12O14924 1447 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 NUDCQ9Y266 331 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 LTN1O94822 1766 aa12.65□□□□□ -0.38
TUBBP8-201ENST00000560273 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
TUBBP8-201ENST00000560273 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
TUBBP8-201ENST00000560273 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
TUBBP8-201ENST00000560273 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms