RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.61
RABGGTA-213ENST00000560127 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
RABGGTA-213ENST00000560127 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 MARCH10Q8NA82 808 aaPredicted RBP18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 BCL9O00512 1426 aa18.81■□□□□ 0.6
RABGGTA-213ENST00000560127 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
RABGGTA-213ENST00000560127 SLIT3O75094 1523 aa18.8■□□□□ 0.6
RABGGTA-213ENST00000560127 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
RABGGTA-213ENST00000560127 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
RABGGTA-213ENST00000560127 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
RABGGTA-213ENST00000560127 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
RABGGTA-213ENST00000560127 C1QTNF8P60827 252 aa18.78■□□□□ 0.6
RABGGTA-213ENST00000560127 TXNRD1Q16881 649 aa18.78■□□□□ 0.6
RABGGTA-213ENST00000560127 SGIP1Q9BQI5 828 aa18.78■□□□□ 0.6
RABGGTA-213ENST00000560127 STK32BQ9NY57 414 aa18.78■□□□□ 0.6
RABGGTA-213ENST00000560127 PIK3C2AO00443 1686 aa18.77■□□□□ 0.6
RABGGTA-213ENST00000560127 SLC15A2Q16348 729 aa18.77■□□□□ 0.6
RABGGTA-213ENST00000560127 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
RABGGTA-213ENST00000560127 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
RABGGTA-213ENST00000560127 WDR17Q8IZU2 1322 aa18.75■□□□□ 0.59
RABGGTA-213ENST00000560127 NLRP6P59044 892 aa18.75■□□□□ 0.59
RABGGTA-213ENST00000560127 MTFR1LQ9H019 292 aa18.75■□□□□ 0.59
RABGGTA-213ENST00000560127 USP6P35125 1406 aa18.74■□□□□ 0.59
RABGGTA-213ENST00000560127 CDCA7Q9BWT1 371 aaPredicted RBP18.74■□□□□ 0.59
RABGGTA-213ENST00000560127 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-213ENST00000560127 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
RABGGTA-213ENST00000560127 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
RABGGTA-213ENST00000560127 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
RABGGTA-213ENST00000560127 QRICH2Q9H0J4 1663 aa18.72■□□□□ 0.59
RABGGTA-213ENST00000560127 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-213ENST00000560127 BTAF1O14981 1849 aa18.7■□□□□ 0.58
RABGGTA-213ENST00000560127 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
RABGGTA-213ENST00000560127 ARXQ96QS3 562 aa18.7■□□□□ 0.58
RABGGTA-213ENST00000560127 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
RABGGTA-213ENST00000560127 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
RABGGTA-213ENST00000560127 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
RABGGTA-213ENST00000560127 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
RABGGTA-213ENST00000560127 EXOC5O00471 708 aa18.68■□□□□ 0.58
RABGGTA-213ENST00000560127 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
RABGGTA-213ENST00000560127 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
RABGGTA-213ENST00000560127 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
RABGGTA-213ENST00000560127 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-213ENST00000560127 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
RABGGTA-213ENST00000560127 TNS2Q63HR2 1409 aa18.66■□□□□ 0.58
RABGGTA-213ENST00000560127 CSB-PGBD3P0DP91 1061 aa18.65■□□□□ 0.58
RABGGTA-213ENST00000560127 NFAT5O94916 1531 aa18.64■□□□□ 0.57
RABGGTA-213ENST00000560127 ABCC6O95255 1503 aa18.64■□□□□ 0.57
RABGGTA-213ENST00000560127 TUBGCP6Q96RT7 1819 aa18.63■□□□□ 0.57
RABGGTA-213ENST00000560127 GPR162Q16538 588 aa18.63■□□□□ 0.57
RABGGTA-213ENST00000560127 ACSBG1Q96GR2 724 aa18.63■□□□□ 0.57
RABGGTA-213ENST00000560127 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
RABGGTA-213ENST00000560127 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
RABGGTA-213ENST00000560127 SOX12O15370 315 aa18.62■□□□□ 0.57
RABGGTA-213ENST00000560127 GIGYF1O75420 1035 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-213ENST00000560127 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
RABGGTA-213ENST00000560127 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
RABGGTA-213ENST00000560127 TTC21BQ7Z4L5 1316 aa18.6■□□□□ 0.57
RABGGTA-213ENST00000560127 LTN1O94822 1766 aa18.6■□□□□ 0.57
RABGGTA-213ENST00000560127 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
RABGGTA-213ENST00000560127 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
RABGGTA-213ENST00000560127 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
RABGGTA-213ENST00000560127 TTC21AQ8NDW8 1320 aa18.55■□□□□ 0.56
RABGGTA-213ENST00000560127 MON2Q7Z3U7 1717 aa18.55■□□□□ 0.56
RABGGTA-213ENST00000560127 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
RABGGTA-213ENST00000560127 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
RABGGTA-213ENST00000560127 USP54Q70EL1 1684 aa18.54■□□□□ 0.56
RABGGTA-213ENST00000560127 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-213ENST00000560127 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
RABGGTA-213ENST00000560127 ERBB3P21860 1342 aa18.53■□□□□ 0.56
RABGGTA-213ENST00000560127 POLD1P28340 1107 aa18.53■□□□□ 0.56
RABGGTA-213ENST00000560127 NLGN2Q8NFZ4 835 aa18.53■□□□□ 0.56
RABGGTA-213ENST00000560127 PNPLA7Q6ZV29 1317 aa18.52■□□□□ 0.56
RABGGTA-213ENST00000560127 IL2RBP14784 551 aa18.52■□□□□ 0.56
RABGGTA-213ENST00000560127 NLRP2Q9NX02 1062 aa18.52■□□□□ 0.56
RABGGTA-213ENST00000560127 LY75O60449 1722 aa18.52■□□□□ 0.55
RABGGTA-213ENST00000560127 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
RABGGTA-213ENST00000560127 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
RABGGTA-213ENST00000560127 KTN1Q86UP2 1357 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-213ENST00000560127 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
RABGGTA-213ENST00000560127 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
RABGGTA-213ENST00000560127 KCNQ4P56696 695 aa18.47■□□□□ 0.55
RABGGTA-213ENST00000560127 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
RABGGTA-213ENST00000560127 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
RABGGTA-213ENST00000560127 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
RABGGTA-213ENST00000560127 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
RABGGTA-213ENST00000560127 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
RABGGTA-213ENST00000560127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.44■□□□□ 0.54
RABGGTA-213ENST00000560127 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
RABGGTA-213ENST00000560127 NME9Q86XW9 330 aa18.43■□□□□ 0.54
RABGGTA-213ENST00000560127 DDX54Q8TDD1 881 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-213ENST00000560127 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
RABGGTA-213ENST00000560127 NSD2O96028 1365 aa18.42■□□□□ 0.54
RABGGTA-213ENST00000560127 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
RABGGTA-213ENST00000560127 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-213ENST00000560127 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
RABGGTA-213ENST00000560127 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
RABGGTA-213ENST00000560127 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms