RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 USP54Q70EL1 1684 aa24.09■■□□□ 1.45
AC105339.3-201ENST00000560043 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
AC105339.3-201ENST00000560043 COL18A1P39060 1754 aa24.08■■□□□ 1.44
AC105339.3-201ENST00000560043 CRB1P82279 1406 aa24.08■■□□□ 1.44
AC105339.3-201ENST00000560043 THSD7AQ9UPZ6 1657 aa24.08■■□□□ 1.44
AC105339.3-201ENST00000560043 TOM1L2Q6ZVM7 507 aa24.07■■□□□ 1.44
AC105339.3-201ENST00000560043 COG3Q96JB2 828 aa24.07■■□□□ 1.44
AC105339.3-201ENST00000560043 OVOS2A0A0J9YW53 1432 aa24.06■■□□□ 1.44
AC105339.3-201ENST00000560043 OVOS2Q6IE36 1432 aa24.06■■□□□ 1.44
AC105339.3-201ENST00000560043 WDR17Q8IZU2 1322 aa24.06■■□□□ 1.44
AC105339.3-201ENST00000560043 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
AC105339.3-201ENST00000560043 CSB-PGBD3P0DP91 1061 aa24.04■■□□□ 1.44
AC105339.3-201ENST00000560043 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
AC105339.3-201ENST00000560043 ABCC6O95255 1503 aa24.03■■□□□ 1.44
AC105339.3-201ENST00000560043 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
AC105339.3-201ENST00000560043 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
AC105339.3-201ENST00000560043 FYB1O15117 783 aa24.01■■□□□ 1.43
AC105339.3-201ENST00000560043 FAM182BQ5T319 152 aa24.01■■□□□ 1.43
AC105339.3-201ENST00000560043 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
AC105339.3-201ENST00000560043 CARD14Q9BXL6 1004 aa23.98■■□□□ 1.43
AC105339.3-201ENST00000560043 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
AC105339.3-201ENST00000560043 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
AC105339.3-201ENST00000560043 MYOM1P52179 1685 aa23.97■■□□□ 1.43
AC105339.3-201ENST00000560043 FAM196AQ6ZSG2 479 aa23.97■■□□□ 1.43
AC105339.3-201ENST00000560043 EP400Q96L91 3159 aa23.97■■□□□ 1.43
AC105339.3-201ENST00000560043 IP6K1Q92551 441 aa23.96■■□□□ 1.43
AC105339.3-201ENST00000560043 CDCA7Q9BWT1 371 aaPredicted RBP23.96■■□□□ 1.43
AC105339.3-201ENST00000560043 ERBB3P21860 1342 aa23.95■■□□□ 1.42
AC105339.3-201ENST00000560043 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
AC105339.3-201ENST00000560043 LTN1O94822 1766 aa23.95■■□□□ 1.42
AC105339.3-201ENST00000560043 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
AC105339.3-201ENST00000560043 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
AC105339.3-201ENST00000560043 NLRP2Q9NX02 1062 aa23.94■■□□□ 1.42
AC105339.3-201ENST00000560043 MAP3K19Q56UN5 1328 aa23.93■■□□□ 1.42
AC105339.3-201ENST00000560043 AMPHP49418 695 aa23.93■■□□□ 1.42
AC105339.3-201ENST00000560043 DDB1Q16531 1140 aa23.93■■□□□ 1.42
AC105339.3-201ENST00000560043 DEFB132Q7Z7B7 95 aa23.93■■□□□ 1.42
AC105339.3-201ENST00000560043 FBLN1P23142 703 aa23.92■■□□□ 1.42
AC105339.3-201ENST00000560043 PARP4Q9UKK3 1724 aaKnown RBP23.92■■□□□ 1.42
AC105339.3-201ENST00000560043 BAG6P46379 1132 aa23.91■■□□□ 1.42
AC105339.3-201ENST00000560043 C11orf95C9JLR9 678 aaPredicted RBP23.9■■□□□ 1.42
AC105339.3-201ENST00000560043 CGNL1Q0VF96 1302 aa23.89■■□□□ 1.42
AC105339.3-201ENST00000560043 HOXC9P31274 260 aa23.89■■□□□ 1.41
AC105339.3-201ENST00000560043 TRIM37O94972 964 aa23.88■■□□□ 1.41
AC105339.3-201ENST00000560043 RRS1Q15050 365 aaKnown RBP23.88■■□□□ 1.41
AC105339.3-201ENST00000560043 LTV1Q96GA3 475 aaPredicted RBP23.88■■□□□ 1.41
AC105339.3-201ENST00000560043 KIF20BQ96Q89 1820 aa23.88■■□□□ 1.41
AC105339.3-201ENST00000560043 DISP2A7MBM2 1401 aa23.87■■□□□ 1.41
AC105339.3-201ENST00000560043 EXOC5O00471 708 aa23.87■■□□□ 1.41
AC105339.3-201ENST00000560043 RTL1A6NKG5 1358 aa23.87■■□□□ 1.41
AC105339.3-201ENST00000560043 PANK3Q9H999 370 aa23.86■■□□□ 1.41
AC105339.3-201ENST00000560043 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
AC105339.3-201ENST00000560043 LRRC37A3O60309 1634 aa23.84■■□□□ 1.41
AC105339.3-201ENST00000560043 IL2RBP14784 551 aa23.84■■□□□ 1.41
AC105339.3-201ENST00000560043 WNK3Q9BYP7 1800 aa23.84■■□□□ 1.41
AC105339.3-201ENST00000560043 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
AC105339.3-201ENST00000560043 APBA3O96018 575 aa23.82■■□□□ 1.4
AC105339.3-201ENST00000560043 EN1Q05925 392 aaPredicted RBP23.82■■□□□ 1.4
AC105339.3-201ENST00000560043 MARCH10Q8NA82 808 aaPredicted RBP23.82■■□□□ 1.4
AC105339.3-201ENST00000560043 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
AC105339.3-201ENST00000560043 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
AC105339.3-201ENST00000560043 TNS1Q9HBL0 1735 aaKnown RBP23.79■■□□□ 1.4
AC105339.3-201ENST00000560043 FLT4P35916 1363 aa23.78■■□□□ 1.4
AC105339.3-201ENST00000560043 TNS2Q63HR2 1409 aa23.78■■□□□ 1.4
AC105339.3-201ENST00000560043 FAM208AQ9UK61 1670 aaKnown RBP23.78■■□□□ 1.4
AC105339.3-201ENST00000560043 INSRP06213 1382 aa23.78■■□□□ 1.4
AC105339.3-201ENST00000560043 SMG6Q86US8 1419 aaKnown RBP23.77■■□□□ 1.4
AC105339.3-201ENST00000560043 PEAK1Q9H792 1746 aa23.77■■□□□ 1.4
AC105339.3-201ENST00000560043 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
AC105339.3-201ENST00000560043 EMILIN1Q9Y6C2 1016 aa23.77■■□□□ 1.4
AC105339.3-201ENST00000560043 BCL9O00512 1426 aa23.76■■□□□ 1.39
AC105339.3-201ENST00000560043 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
AC105339.3-201ENST00000560043 PPM1GO15355 546 aaPredicted RBP23.75■■□□□ 1.39
AC105339.3-201ENST00000560043 EZH2Q15910 746 aaKnown RBP23.75■■□□□ 1.39
AC105339.3-201ENST00000560043 KNSTRNQ9Y448 316 aa23.75■■□□□ 1.39
AC105339.3-201ENST00000560043 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
AC105339.3-201ENST00000560043 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
AC105339.3-201ENST00000560043 NSD2O96028 1365 aa23.74■■□□□ 1.39
AC105339.3-201ENST00000560043 PARD3Q8TEW0 1356 aa23.74■■□□□ 1.39
AC105339.3-201ENST00000560043 BCL11BQ9C0K0 894 aaPredicted RBP23.73■■□□□ 1.39
AC105339.3-201ENST00000560043 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
AC105339.3-201ENST00000560043 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
AC105339.3-201ENST00000560043 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
AC105339.3-201ENST00000560043 MORC1Q86VD1 984 aa23.69■■□□□ 1.38
AC105339.3-201ENST00000560043 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
AC105339.3-201ENST00000560043 ANKRD26Q9UPS8 1709 aa23.69■■□□□ 1.38
AC105339.3-201ENST00000560043 SBF2Q86WG5 1849 aa23.68■■□□□ 1.38
AC105339.3-201ENST00000560043 ZCRB1Q8TBF4 217 aaKnown RBP23.68■■□□□ 1.38
AC105339.3-201ENST00000560043 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
AC105339.3-201ENST00000560043 RAPGEF4Q8WZA2 1011 aa23.68■■□□□ 1.38
AC105339.3-201ENST00000560043 RGPD2P0DJD1 1756 aa23.68■■□□□ 1.38
AC105339.3-201ENST00000560043 PLSCR1O15162 318 aa23.67■■□□□ 1.38
AC105339.3-201ENST00000560043 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
AC105339.3-201ENST00000560043 MAP2P11137 1827 aaKnown RBP23.66■■□□□ 1.38
AC105339.3-201ENST00000560043 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
AC105339.3-201ENST00000560043 MEGF6O75095 1541 aa23.64■■□□□ 1.38
AC105339.3-201ENST00000560043 KCNQ2O43526 872 aa23.64■■□□□ 1.37
AC105339.3-201ENST00000560043 AMER1Q5JTC6 1135 aaPredicted RBP23.64■■□□□ 1.37
AC105339.3-201ENST00000560043 ACSBG1Q96GR2 724 aa23.64■■□□□ 1.37
AC105339.3-201ENST00000560043 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms