RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 LTV1Q96GA3 475 aaPredicted RBP15.54■□□□□ 0.08
TM2D3-208ENST00000559891 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
TM2D3-208ENST00000559891 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
TM2D3-208ENST00000559891 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
TM2D3-208ENST00000559891 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
TM2D3-208ENST00000559891 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
TM2D3-208ENST00000559891 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
TM2D3-208ENST00000559891 ADRA2BP18089 450 aa15.52■□□□□ 0.08
TM2D3-208ENST00000559891 JCADQ9P266 1359 aa15.52■□□□□ 0.07
TM2D3-208ENST00000559891 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
TM2D3-208ENST00000559891 EIF4A2Q14240 407 aaKnown RBP15.51■□□□□ 0.07
TM2D3-208ENST00000559891 IP6K1Q92551 441 aa15.51■□□□□ 0.07
TM2D3-208ENST00000559891 PRDM11Q9NQV5 511 aa15.51■□□□□ 0.07
TM2D3-208ENST00000559891 CDK12Q9NYV4 1490 aaPredicted RBP15.51■□□□□ 0.07
TM2D3-208ENST00000559891 FLT4P35916 1363 aa15.51■□□□□ 0.07
TM2D3-208ENST00000559891 TSHZ2Q9NRE2 1034 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 COL18A1P39060 1754 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 LRP6O75581 1613 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 IL13P35225 146 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 FBXO41Q8TF61 875 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
TM2D3-208ENST00000559891 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
TM2D3-208ENST00000559891 CPDO75976 1380 aa15.49■□□□□ 0.07
TM2D3-208ENST00000559891 DIAPH1O60610 1272 aaKnown RBP15.49■□□□□ 0.07
TM2D3-208ENST00000559891 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
TM2D3-208ENST00000559891 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
TM2D3-208ENST00000559891 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
TM2D3-208ENST00000559891 INSRP06213 1382 aa15.47■□□□□ 0.07
TM2D3-208ENST00000559891 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
TM2D3-208ENST00000559891 HMOX1P09601 288 aa15.47■□□□□ 0.07
TM2D3-208ENST00000559891 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
TM2D3-208ENST00000559891 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
TM2D3-208ENST00000559891 ANKRD24Q8TF21 1146 aa15.46■□□□□ 0.07
TM2D3-208ENST00000559891 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.06
TM2D3-208ENST00000559891 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.06
TM2D3-208ENST00000559891 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.06
TM2D3-208ENST00000559891 NBPF4Q96M43 638 aa15.46■□□□□ 0.06
TM2D3-208ENST00000559891 EYA1Q99502 592 aa15.46■□□□□ 0.06
TM2D3-208ENST00000559891 BTG4Q9NY30 223 aa15.46■□□□□ 0.06
TM2D3-208ENST00000559891 LMO7Q8WWI1 1683 aa15.45■□□□□ 0.06
TM2D3-208ENST00000559891 STRN4Q9NRL3 753 aa15.45■□□□□ 0.06
TM2D3-208ENST00000559891 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
TM2D3-208ENST00000559891 ERBB3P21860 1342 aa15.44■□□□□ 0.06
TM2D3-208ENST00000559891 C8orf37Q96NL8 207 aa15.44■□□□□ 0.06
TM2D3-208ENST00000559891 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
TM2D3-208ENST00000559891 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
TM2D3-208ENST00000559891 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
TM2D3-208ENST00000559891 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
TM2D3-208ENST00000559891 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
TM2D3-208ENST00000559891 COL5A2P05997 1499 aaPredicted RBP15.41■□□□□ 0.06
TM2D3-208ENST00000559891 BLMP54132 1417 aaPredicted RBP15.41■□□□□ 0.06
TM2D3-208ENST00000559891 RGPD1P0DJD0 1748 aa15.41■□□□□ 0.06
TM2D3-208ENST00000559891 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
TM2D3-208ENST00000559891 NLRP2Q9NX02 1062 aa15.41■□□□□ 0.06
TM2D3-208ENST00000559891 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
TM2D3-208ENST00000559891 NGLY1Q96IV0 654 aa15.4■□□□□ 0.06
TM2D3-208ENST00000559891 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
TM2D3-208ENST00000559891 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
TM2D3-208ENST00000559891 IGSF1Q8N6C5 1336 aa15.4■□□□□ 0.06
TM2D3-208ENST00000559891 PHACTR3Q96KR7 559 aa15.4■□□□□ 0.06
TM2D3-208ENST00000559891 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
TM2D3-208ENST00000559891 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.06
TM2D3-208ENST00000559891 FKBP8Q14318 412 aa15.39■□□□□ 0.05
TM2D3-208ENST00000559891 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
TM2D3-208ENST00000559891 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
TM2D3-208ENST00000559891 EVA1CP58658 441 aa15.38■□□□□ 0.05
TM2D3-208ENST00000559891 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
TM2D3-208ENST00000559891 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
TM2D3-208ENST00000559891 SLIT2O94813 1529 aa15.38■□□□□ 0.05
TM2D3-208ENST00000559891 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
TM2D3-208ENST00000559891 TOM1L2Q6ZVM7 507 aa15.37■□□□□ 0.05
TM2D3-208ENST00000559891 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
TM2D3-208ENST00000559891 BCL9LQ86UU0 1499 aa15.37■□□□□ 0.05
TM2D3-208ENST00000559891 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
TM2D3-208ENST00000559891 APAF1O14727 1248 aa15.35■□□□□ 0.05
TM2D3-208ENST00000559891 ABCC6O95255 1503 aa15.35■□□□□ 0.05
TM2D3-208ENST00000559891 NRAPQ86VF7 1730 aa15.35■□□□□ 0.05
TM2D3-208ENST00000559891 NEFLP07196 543 aa15.35■□□□□ 0.05
TM2D3-208ENST00000559891 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
TM2D3-208ENST00000559891 FCHSD2O94868 740 aa15.34■□□□□ 0.05
TM2D3-208ENST00000559891 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
TM2D3-208ENST00000559891 NEUROD2Q15784 382 aa15.34■□□□□ 0.05
TM2D3-208ENST00000559891 FNBP4Q8N3X1 1017 aaPredicted RBP15.34■□□□□ 0.05
TM2D3-208ENST00000559891 AFF2P51816 1311 aa15.34■□□□□ 0.05
TM2D3-208ENST00000559891 KDRP35968 1356 aa15.34■□□□□ 0.05
TM2D3-208ENST00000559891 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
TM2D3-208ENST00000559891 USP21Q9UK80 565 aa15.33■□□□□ 0.04
TM2D3-208ENST00000559891 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
TM2D3-208ENST00000559891 MEGF6O75095 1541 aa15.32■□□□□ 0.04
TM2D3-208ENST00000559891 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
TM2D3-208ENST00000559891 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
TM2D3-208ENST00000559891 CRB1P82279 1406 aa15.32■□□□□ 0.04
TM2D3-208ENST00000559891 NCAPD2Q15021 1401 aa15.32■□□□□ 0.04
TM2D3-208ENST00000559891 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
TM2D3-208ENST00000559891 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
TM2D3-208ENST00000559891 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
TM2D3-208ENST00000559891 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
TM2D3-208ENST00000559891 ANP32EQ9BTT0 268 aa15.29■□□□□ 0.04
TM2D3-208ENST00000559891 SPATA31A5Q5VU36 1347 aa15.28■□□□□ 0.04
TM2D3-208ENST00000559891 SPATA31A7Q8IWB4 1347 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms