RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 STRN4Q9NRL3 753 aa27.83■■■□□ 2.05
TSPAN3-207ENST00000559494 AMER1Q5JTC6 1135 aaPredicted RBP27.82■■■□□ 2.04
TSPAN3-207ENST00000559494 CCDC9Q9Y3X0 531 aaKnown RBP27.8■■■□□ 2.04
TSPAN3-207ENST00000559494 MAP3K19Q56UN5 1328 aa27.8■■■□□ 2.04
TSPAN3-207ENST00000559494 RRS1Q15050 365 aaKnown RBP27.79■■■□□ 2.04
TSPAN3-207ENST00000559494 LARP1Q6PKG0 1096 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-207ENST00000559494 LTN1O94822 1766 aa27.78■■■□□ 2.04
TSPAN3-207ENST00000559494 RGPD5Q99666 1765 aa27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 IP6K1Q92551 441 aa27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 SPATA31A5Q5VU36 1347 aa27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 SPATA31A7Q8IWB4 1347 aa27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 NSD2O96028 1365 aa27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 COL5A2P05997 1499 aaPredicted RBP27.77■■■□□ 2.04
TSPAN3-207ENST00000559494 GLI3P10071 1580 aa27.75■■■□□ 2.03
TSPAN3-207ENST00000559494 TNNT2P45379 298 aaPredicted RBP27.74■■■□□ 2.03
TSPAN3-207ENST00000559494 AMPHP49418 695 aa27.74■■■□□ 2.03
TSPAN3-207ENST00000559494 HOXC9P31274 260 aa27.73■■■□□ 2.03
TSPAN3-207ENST00000559494 MORC1Q86VD1 984 aa27.73■■■□□ 2.03
TSPAN3-207ENST00000559494 SPATA31A1Q5TZJ5 1347 aa27.73■■■□□ 2.03
TSPAN3-207ENST00000559494 ANKRD26Q9UPS8 1709 aa27.73■■■□□ 2.03
TSPAN3-207ENST00000559494 ABCC6O95255 1503 aa27.72■■■□□ 2.03
TSPAN3-207ENST00000559494 CC2D1BQ5T0F9 858 aaKnown RBP27.71■■■□□ 2.03
TSPAN3-207ENST00000559494 EMILIN1Q9Y6C2 1016 aa27.71■■■□□ 2.03
TSPAN3-207ENST00000559494 WDR17Q8IZU2 1322 aa27.7■■■□□ 2.03
TSPAN3-207ENST00000559494 ONECUT3O60422 494 aaPredicted RBP27.7■■■□□ 2.03
TSPAN3-207ENST00000559494 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.02
TSPAN3-207ENST00000559494 ANKRD24Q8TF21 1146 aa27.69■■■□□ 2.02
TSPAN3-207ENST00000559494 USP35Q9P2H5 1018 aa27.69■■■□□ 2.02
TSPAN3-207ENST00000559494 POLKQ9UBT6 870 aa27.69■■■□□ 2.02
TSPAN3-207ENST00000559494 MAP2P11137 1827 aaKnown RBP27.69■■■□□ 2.02
TSPAN3-207ENST00000559494 NPC1L1Q9UHC9 1359 aa27.69■■■□□ 2.02
TSPAN3-207ENST00000559494 DDX10Q13206 875 aaKnown RBP27.68■■■□□ 2.02
TSPAN3-207ENST00000559494 TOM1L2Q6ZVM7 507 aa27.68■■■□□ 2.02
TSPAN3-207ENST00000559494 RGS12O14924 1447 aa27.68■■■□□ 2.02
TSPAN3-207ENST00000559494 CSB-PGBD3P0DP91 1061 aa27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 FAM98CQ17RN3 349 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 BLMP54132 1417 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 ERBB3P21860 1342 aa27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 CNGB1Q14028 1251 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 HSP90AB2PQ58FF8 381 aa27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 LTV1Q96GA3 475 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-207ENST00000559494 CRB1P82279 1406 aa27.66■■■□□ 2.02
TSPAN3-207ENST00000559494 RTL1A6NKG5 1358 aa27.66■■■□□ 2.02
TSPAN3-207ENST00000559494 PPM1GO15355 546 aaPredicted RBP27.65■■■□□ 2.02
TSPAN3-207ENST00000559494 TCP11L2Q8N4U5 519 aa27.65■■■□□ 2.02
TSPAN3-207ENST00000559494 PEAK1Q9H792 1746 aa27.65■■■□□ 2.02
TSPAN3-207ENST00000559494 KIF24Q5T7B8 1368 aa27.64■■■□□ 2.02
TSPAN3-207ENST00000559494 ZNF316A6NFI3 1004 aaPredicted RBP27.64■■■□□ 2.01
TSPAN3-207ENST00000559494 SEPT12Q8IYM1 358 aa27.64■■■□□ 2.01
TSPAN3-207ENST00000559494 CARD10Q9BWT7 1032 aa27.64■■■□□ 2.01
TSPAN3-207ENST00000559494 BARGINQ6ZT62 677 aa27.63■■■□□ 2.01
TSPAN3-207ENST00000559494 FLT4P35916 1363 aa27.63■■■□□ 2.01
TSPAN3-207ENST00000559494 NLRP2Q9NX02 1062 aa27.62■■■□□ 2.01
TSPAN3-207ENST00000559494 THRAP3Q9Y2W1 955 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-207ENST00000559494 INSRP06213 1382 aa27.62■■■□□ 2.01
TSPAN3-207ENST00000559494 A0A0G2JS52 829 aa27.58■■■□□ 2.01
TSPAN3-207ENST00000559494 MYT1Q01538 1121 aa27.58■■■□□ 2.01
TSPAN3-207ENST00000559494 NBPF6Q5VWK0 638 aa27.55■■■□□ 2
TSPAN3-207ENST00000559494 NBPF4Q96M43 638 aa27.55■■■□□ 2
TSPAN3-207ENST00000559494 SMG6Q86US8 1419 aaKnown RBP27.54■■■□□ 2
TSPAN3-207ENST00000559494 MTHFSP49914 203 aa27.54■■■□□ 2
TSPAN3-207ENST00000559494 BRWD3Q6RI45 1802 aa27.54■■■□□ 2
TSPAN3-207ENST00000559494 THSD7AQ9UPZ6 1657 aa27.53■■■□□ 2
TSPAN3-207ENST00000559494 RGPD2P0DJD1 1756 aa27.52■■■□□ 2
TSPAN3-207ENST00000559494 EIF4A2Q14240 407 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-207ENST00000559494 KRT27Q7Z3Y8 459 aa27.5■■□□□ 1.99
TSPAN3-207ENST00000559494 CDCA7Q9BWT1 371 aaPredicted RBP27.49■■□□□ 1.99
TSPAN3-207ENST00000559494 DISP2A7MBM2 1401 aa27.48■■□□□ 1.99
TSPAN3-207ENST00000559494 USHBP1Q8N6Y0 703 aa27.48■■□□□ 1.99
TSPAN3-207ENST00000559494 FAM208AQ9UK61 1670 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-207ENST00000559494 EYA1Q99502 592 aa27.47■■□□□ 1.99
TSPAN3-207ENST00000559494 IL2RBP14784 551 aa27.46■■□□□ 1.99
TSPAN3-207ENST00000559494 PPP2R1AP30153 589 aa27.45■■□□□ 1.99
TSPAN3-207ENST00000559494 DDB1Q16531 1140 aa27.44■■□□□ 1.98
TSPAN3-207ENST00000559494 FAM182BQ5T319 152 aa27.44■■□□□ 1.98
TSPAN3-207ENST00000559494 PDE3BQ13370 1112 aa27.43■■□□□ 1.98
TSPAN3-207ENST00000559494 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
TSPAN3-207ENST00000559494 PARD3Q8TEW0 1356 aa27.43■■□□□ 1.98
TSPAN3-207ENST00000559494 WNK3Q9BYP7 1800 aa27.43■■□□□ 1.98
TSPAN3-207ENST00000559494 EXOC5O00471 708 aa27.42■■□□□ 1.98
TSPAN3-207ENST00000559494 IL13P35225 146 aa27.42■■□□□ 1.98
TSPAN3-207ENST00000559494 EP400Q96L91 3159 aa27.41■■□□□ 1.98
TSPAN3-207ENST00000559494 UPF1Q92900 1129 aaKnown RBP eCLIP27.39■■□□□ 1.971e-6■■■□□ 17.8
TSPAN3-207ENST00000559494 NCAPD2Q15021 1401 aa27.38■■□□□ 1.97
TSPAN3-207ENST00000559494 RALBP1Q15311 655 aa27.38■■□□□ 1.97
TSPAN3-207ENST00000559494 MARCH10Q8NA82 808 aaPredicted RBP27.38■■□□□ 1.97
TSPAN3-207ENST00000559494 IGSF1Q8N6C5 1336 aa27.37■■□□□ 1.97
TSPAN3-207ENST00000559494 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
TSPAN3-207ENST00000559494 RAPGEF4Q8WZA2 1011 aa27.37■■□□□ 1.97
TSPAN3-207ENST00000559494 MEGF6O75095 1541 aa27.36■■□□□ 1.97
TSPAN3-207ENST00000559494 DIAPH1O60610 1272 aaKnown RBP27.36■■□□□ 1.97
TSPAN3-207ENST00000559494 TATP17735 454 aaPredicted RBP27.35■■□□□ 1.97
TSPAN3-207ENST00000559494 COL3A1P02461 1466 aaPredicted RBP27.33■■□□□ 1.97
TSPAN3-207ENST00000559494 FAM196AQ6ZSG2 479 aa27.33■■□□□ 1.97
TSPAN3-207ENST00000559494 ZCRB1Q8TBF4 217 aaKnown RBP27.33■■□□□ 1.97
TSPAN3-207ENST00000559494 TNS2Q63HR2 1409 aa27.33■■□□□ 1.97
TSPAN3-207ENST00000559494 OVOS2A0A0G2JMS6 1433 aa27.32■■□□□ 1.96
TSPAN3-207ENST00000559494 CFAP53Q96M91 514 aa27.32■■□□□ 1.96
TSPAN3-207ENST00000559494 AEBP1Q8IUX7 1158 aa27.31■■□□□ 1.96
TSPAN3-207ENST00000559494 SULT6B1Q6IMI4 303 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms