RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 BCL11BQ9C0K0 894 aaPredicted RBP23.79■■□□□ 1.4
PSEN1-224ENST00000559361 UTRNP46939 3433 aa23.79■■□□□ 1.4
PSEN1-224ENST00000559361 SLIT3O75094 1523 aa23.79■■□□□ 1.4
PSEN1-224ENST00000559361 BCL9O00512 1426 aa23.78■■□□□ 1.4
PSEN1-224ENST00000559361 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
PSEN1-224ENST00000559361 DDB1Q16531 1140 aa23.78■■□□□ 1.4
PSEN1-224ENST00000559361 PTF1AQ7RTS3 328 aa23.78■■□□□ 1.4
PSEN1-224ENST00000559361 USP6P35125 1406 aa23.76■■□□□ 1.39
PSEN1-224ENST00000559361 SRPK2P78362 688 aaKnown RBP23.76■■□□□ 1.39
PSEN1-224ENST00000559361 CABP2Q9NPB3 220 aa23.76■■□□□ 1.39
PSEN1-224ENST00000559361 NLRP6P59044 892 aa23.75■■□□□ 1.39
PSEN1-224ENST00000559361 PDGFDQ9GZP0 370 aaPredicted RBP23.75■■□□□ 1.39
PSEN1-224ENST00000559361 MARCH10Q8NA82 808 aaPredicted RBP23.74■■□□□ 1.39
PSEN1-224ENST00000559361 AXIN2Q9Y2T1 843 aa23.74■■□□□ 1.39
PSEN1-224ENST00000559361 WNK3Q9BYP7 1800 aa23.74■■□□□ 1.39
PSEN1-224ENST00000559361 PTGER2P43116 358 aa23.73■■□□□ 1.39
PSEN1-224ENST00000559361 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
PSEN1-224ENST00000559361 CABP1Q9NZU7 370 aa23.73■■□□□ 1.39
PSEN1-224ENST00000559361 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
PSEN1-224ENST00000559361 CDCA7Q9BWT1 371 aaPredicted RBP23.72■■□□□ 1.39
PSEN1-224ENST00000559361 WDR17Q8IZU2 1322 aa23.72■■□□□ 1.39
PSEN1-224ENST00000559361 PIK3C2AO00443 1686 aa23.7■■□□□ 1.39
PSEN1-224ENST00000559361 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
PSEN1-224ENST00000559361 AKAP12Q02952 1782 aa23.7■■□□□ 1.38
PSEN1-224ENST00000559361 ZBTB7CA1YPR0 619 aa23.69■■□□□ 1.38
PSEN1-224ENST00000559361 ARHGEF25Q86VW2 580 aa23.68■■□□□ 1.38
PSEN1-224ENST00000559361 TRPM1Q7Z4N2 1603 aa23.68■■□□□ 1.38
PSEN1-224ENST00000559361 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
PSEN1-224ENST00000559361 MYOM1P52179 1685 aa23.67■■□□□ 1.38
PSEN1-224ENST00000559361 QRICH2Q9H0J4 1663 aa23.67■■□□□ 1.38
PSEN1-224ENST00000559361 ZBTB7AO95365 584 aa23.67■■□□□ 1.38
PSEN1-224ENST00000559361 CARD10Q9BWT7 1032 aa23.67■■□□□ 1.38
PSEN1-224ENST00000559361 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
PSEN1-224ENST00000559361 TXNRD1Q16881 649 aa23.65■■□□□ 1.38
PSEN1-224ENST00000559361 SLC15A2Q16348 729 aa23.64■■□□□ 1.37
PSEN1-224ENST00000559361 ZNF784Q8NCA9 323 aaPredicted RBP23.63■■□□□ 1.37
PSEN1-224ENST00000559361 KCNH5Q8NCM2 988 aa23.63■■□□□ 1.37
PSEN1-224ENST00000559361 SGIP1Q9BQI5 828 aa23.63■■□□□ 1.37
PSEN1-224ENST00000559361 ATF5Q9Y2D1 282 aaPredicted RBP23.63■■□□□ 1.37
PSEN1-224ENST00000559361 CHD4Q14839 1912 aa23.63■■□□□ 1.37
PSEN1-224ENST00000559361 SYT17Q9BSW7 474 aa23.62■■□□□ 1.37
PSEN1-224ENST00000559361 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
PSEN1-224ENST00000559361 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
PSEN1-224ENST00000559361 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
PSEN1-224ENST00000559361 EXOC5O00471 708 aa23.61■■□□□ 1.37
PSEN1-224ENST00000559361 ZNF692Q9BU19 519 aaPredicted RBP23.61■■□□□ 1.37
PSEN1-224ENST00000559361 FHDC1Q9C0D6 1143 aaPredicted RBP23.6■■□□□ 1.37
PSEN1-224ENST00000559361 MTFR1LQ9H019 292 aa23.59■■□□□ 1.37
PSEN1-224ENST00000559361 CCDC7Q96M83 1385 aa23.58■■□□□ 1.37
PSEN1-224ENST00000559361 EVC2Q86UK5 1308 aa23.58■■□□□ 1.36
PSEN1-224ENST00000559361 NFAT5O94916 1531 aa23.57■■□□□ 1.36
PSEN1-224ENST00000559361 TTC21AQ8NDW8 1320 aa23.57■■□□□ 1.36
PSEN1-224ENST00000559361 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
PSEN1-224ENST00000559361 TNS2Q63HR2 1409 aa23.56■■□□□ 1.36
PSEN1-224ENST00000559361 ABCC6O95255 1503 aa23.55■■□□□ 1.36
PSEN1-224ENST00000559361 NHSQ6T4R5 1651 aa23.55■■□□□ 1.36
PSEN1-224ENST00000559361 KAT6BQ8WYB5 2073 aa23.54■■□□□ 1.36
PSEN1-224ENST00000559361 PAPPAQ13219 1627 aa23.53■■□□□ 1.36
PSEN1-224ENST00000559361 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
PSEN1-224ENST00000559361 SOX12O15370 315 aa23.51■■□□□ 1.35
PSEN1-224ENST00000559361 USP47Q96K76 1375 aa23.51■■□□□ 1.35
PSEN1-224ENST00000559361 SLC24A1O60721 1099 aa23.5■■□□□ 1.35
PSEN1-224ENST00000559361 ARXQ96QS3 562 aa23.5■■□□□ 1.35
PSEN1-224ENST00000559361 BTAF1O14981 1849 aa23.48■■□□□ 1.35
PSEN1-224ENST00000559361 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.35
PSEN1-224ENST00000559361 ACSBG1Q96GR2 724 aa23.48■■□□□ 1.35
PSEN1-224ENST00000559361 ERBB3P21860 1342 aa23.48■■□□□ 1.35
PSEN1-224ENST00000559361 USP31Q70CQ4 1352 aa23.48■■□□□ 1.35
PSEN1-224ENST00000559361 C1QTNF8P60827 252 aa23.46■■□□□ 1.35
PSEN1-224ENST00000559361 USP54Q70EL1 1684 aa23.46■■□□□ 1.35
PSEN1-224ENST00000559361 MON2Q7Z3U7 1717 aa23.46■■□□□ 1.35
PSEN1-224ENST00000559361 KTN1Q86UP2 1357 aaKnown RBP23.46■■□□□ 1.35
PSEN1-224ENST00000559361 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
PSEN1-224ENST00000559361 LRRC4BQ9NT99 713 aa23.45■■□□□ 1.34
PSEN1-224ENST00000559361 IL2RBP14784 551 aa23.44■■□□□ 1.34
PSEN1-224ENST00000559361 ZNF827Q17R98 1081 aa23.44■■□□□ 1.34
PSEN1-224ENST00000559361 COL24A1Q17RW2 1714 aa23.43■■□□□ 1.34
PSEN1-224ENST00000559361 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
PSEN1-224ENST00000559361 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
PSEN1-224ENST00000559361 QSER1Q2KHR3 1735 aa23.42■■□□□ 1.34
PSEN1-224ENST00000559361 AKT1S1Q96B36 256 aa23.41■■□□□ 1.34
PSEN1-224ENST00000559361 LTN1O94822 1766 aa23.41■■□□□ 1.34
PSEN1-224ENST00000559361 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
PSEN1-224ENST00000559361 SLC16A10Q8TF71 515 aa23.4■■□□□ 1.34
PSEN1-224ENST00000559361 CD163L1Q9NR16 1453 aa23.39■■□□□ 1.34
PSEN1-224ENST00000559361 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
PSEN1-224ENST00000559361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.38■■□□□ 1.33
PSEN1-224ENST00000559361 SLC27A3Q5K4L6 730 aa23.37■■□□□ 1.33
PSEN1-224ENST00000559361 NME9Q86XW9 330 aa23.37■■□□□ 1.33
PSEN1-224ENST00000559361 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
PSEN1-224ENST00000559361 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
PSEN1-224ENST00000559361 GPR162Q16538 588 aa23.35■■□□□ 1.33
PSEN1-224ENST00000559361 TESK2Q96S53 571 aa23.34■■□□□ 1.33
PSEN1-224ENST00000559361 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
PSEN1-224ENST00000559361 TUBGCP6Q96RT7 1819 aa23.33■■□□□ 1.32
PSEN1-224ENST00000559361 CEP350Q5VT06 3117 aa23.31■■□□□ 1.32
PSEN1-224ENST00000559361 TMF1P82094 1093 aa23.31■■□□□ 1.32
PSEN1-224ENST00000559361 CDCA8Q53HL2 280 aa23.31■■□□□ 1.32
PSEN1-224ENST00000559361 PUS7Q96PZ0 661 aaKnown RBP23.31■■□□□ 1.32
PSEN1-224ENST00000559361 POLD1P28340 1107 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 722.3 ms