RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 RREB1Q92766 1687 aa12.5□□□□□ -0.41
CLPX-205ENST00000559218 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
CLPX-205ENST00000559218 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
CLPX-205ENST00000559218 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CLPX-205ENST00000559218 SLIT3O75094 1523 aa12.48□□□□□ -0.41
CLPX-205ENST00000559218 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
CLPX-205ENST00000559218 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
CLPX-205ENST00000559218 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
CLPX-205ENST00000559218 OVOS2A0A0J9YW53 1432 aa12.47□□□□□ -0.41
CLPX-205ENST00000559218 OVOS2Q6IE36 1432 aa12.47□□□□□ -0.41
CLPX-205ENST00000559218 DDB1Q16531 1140 aa12.47□□□□□ -0.41
CLPX-205ENST00000559218 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
CLPX-205ENST00000559218 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
CLPX-205ENST00000559218 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
CLPX-205ENST00000559218 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
CLPX-205ENST00000559218 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
CLPX-205ENST00000559218 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
CLPX-205ENST00000559218 SOX12O15370 315 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 KCNQ2O43526 872 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
CLPX-205ENST00000559218 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
CLPX-205ENST00000559218 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
CLPX-205ENST00000559218 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
CLPX-205ENST00000559218 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
CLPX-205ENST00000559218 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
CLPX-205ENST00000559218 PLSCR1O15162 318 aa12.44□□□□□ -0.42
CLPX-205ENST00000559218 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CLPX-205ENST00000559218 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
CLPX-205ENST00000559218 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
CLPX-205ENST00000559218 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
CLPX-205ENST00000559218 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
CLPX-205ENST00000559218 COL18A1P39060 1754 aa12.43□□□□□ -0.42
CLPX-205ENST00000559218 UTRNP46939 3433 aa12.42□□□□□ -0.42
CLPX-205ENST00000559218 YY1P25490 414 aa12.42□□□□□ -0.42
CLPX-205ENST00000559218 CSB-PGBD3P0DP91 1061 aa12.41□□□□□ -0.42
CLPX-205ENST00000559218 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
CLPX-205ENST00000559218 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
CLPX-205ENST00000559218 BCL9O00512 1426 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 ZBTB7AO95365 584 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
CLPX-205ENST00000559218 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
CLPX-205ENST00000559218 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 TRPM1Q7Z4N2 1603 aa12.4□□□□□ -0.42
CLPX-205ENST00000559218 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
CLPX-205ENST00000559218 NFAT5O94916 1531 aa12.39□□□□□ -0.43
CLPX-205ENST00000559218 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
CLPX-205ENST00000559218 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
CLPX-205ENST00000559218 EXOC5O00471 708 aa12.38□□□□□ -0.43
CLPX-205ENST00000559218 PTGER2P43116 358 aa12.38□□□□□ -0.43
CLPX-205ENST00000559218 POLA2Q14181 598 aa12.38□□□□□ -0.43
CLPX-205ENST00000559218 TXNRD1Q16881 649 aa12.38□□□□□ -0.43
CLPX-205ENST00000559218 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
CLPX-205ENST00000559218 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
CLPX-205ENST00000559218 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
CLPX-205ENST00000559218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLPX-205ENST00000559218 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
CLPX-205ENST00000559218 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
CLPX-205ENST00000559218 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
CLPX-205ENST00000559218 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
CLPX-205ENST00000559218 NME9Q86XW9 330 aa12.36□□□□□ -0.43
CLPX-205ENST00000559218 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
CLPX-205ENST00000559218 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 TNS2Q63HR2 1409 aa12.35□□□□□ -0.43
CLPX-205ENST00000559218 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
CLPX-205ENST00000559218 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
CLPX-205ENST00000559218 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
CLPX-205ENST00000559218 ERBB3P21860 1342 aa12.34□□□□□ -0.43
CLPX-205ENST00000559218 MYOM1P52179 1685 aa12.32□□□□□ -0.44
CLPX-205ENST00000559218 ABCC6O95255 1503 aa12.32□□□□□ -0.44
CLPX-205ENST00000559218 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
CLPX-205ENST00000559218 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CLPX-205ENST00000559218 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
CLPX-205ENST00000559218 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
CLPX-205ENST00000559218 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
CLPX-205ENST00000559218 IL2RBP14784 551 aa12.31□□□□□ -0.44
CLPX-205ENST00000559218 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
CLPX-205ENST00000559218 MTFR1LQ9H019 292 aa12.31□□□□□ -0.44
CLPX-205ENST00000559218 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
CLPX-205ENST00000559218 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
CLPX-205ENST00000559218 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
CLPX-205ENST00000559218 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
CLPX-205ENST00000559218 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
CLPX-205ENST00000559218 ZNF827Q17R98 1081 aa12.29□□□□□ -0.44
CLPX-205ENST00000559218 HDGFL2Q7Z4V5 671 aaPredicted RBP12.29□□□□□ -0.44
CLPX-205ENST00000559218 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
CLPX-205ENST00000559218 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
CLPX-205ENST00000559218 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
CLPX-205ENST00000559218 PAPPAQ13219 1627 aa12.27□□□□□ -0.44
CLPX-205ENST00000559218 USP54Q70EL1 1684 aa12.27□□□□□ -0.45
CLPX-205ENST00000559218 ZNF784Q8NCA9 323 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms