RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-205ENST00000559080 BCL9O00512 1426 aa16.25■□□□□ 0.19
CHRNA3-205ENST00000559080 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-205ENST00000559080 DDB1Q16531 1140 aa16.24■□□□□ 0.19
CHRNA3-205ENST00000559080 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
CHRNA3-205ENST00000559080 USP6P35125 1406 aa16.23■□□□□ 0.19
CHRNA3-205ENST00000559080 MARCH10Q8NA82 808 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-205ENST00000559080 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-205ENST00000559080 ZBTB7AO95365 584 aa16.22■□□□□ 0.19
CHRNA3-205ENST00000559080 NBPF1Q3BBV0 1214 aa16.22■□□□□ 0.19
CHRNA3-205ENST00000559080 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
CHRNA3-205ENST00000559080 UTRNP46939 3433 aa16.21■□□□□ 0.19
CHRNA3-205ENST00000559080 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
CHRNA3-205ENST00000559080 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
CHRNA3-205ENST00000559080 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
CHRNA3-205ENST00000559080 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
CHRNA3-205ENST00000559080 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
CHRNA3-205ENST00000559080 NLRP6P59044 892 aa16.2■□□□□ 0.18
CHRNA3-205ENST00000559080 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
CHRNA3-205ENST00000559080 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
CHRNA3-205ENST00000559080 BTAF1O14981 1849 aa16.18■□□□□ 0.18
CHRNA3-205ENST00000559080 SLC15A2Q16348 729 aa16.18■□□□□ 0.18
CHRNA3-205ENST00000559080 FHDC1Q9C0D6 1143 aaPredicted RBP16.18■□□□□ 0.18
CHRNA3-205ENST00000559080 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
CHRNA3-205ENST00000559080 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CHRNA3-205ENST00000559080 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
CHRNA3-205ENST00000559080 ARHGEF25Q86VW2 580 aa16.16■□□□□ 0.18
CHRNA3-205ENST00000559080 CDCA7Q9BWT1 371 aaPredicted RBP16.16■□□□□ 0.18
CHRNA3-205ENST00000559080 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
CHRNA3-205ENST00000559080 CARD10Q9BWT7 1032 aa16.15■□□□□ 0.18
CHRNA3-205ENST00000559080 STK32BQ9NY57 414 aa16.15■□□□□ 0.18
CHRNA3-205ENST00000559080 NFAT5O94916 1531 aa16.14■□□□□ 0.18
CHRNA3-205ENST00000559080 LTN1O94822 1766 aa16.14■□□□□ 0.17
CHRNA3-205ENST00000559080 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
CHRNA3-205ENST00000559080 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
CHRNA3-205ENST00000559080 MON2Q7Z3U7 1717 aa16.13■□□□□ 0.17
CHRNA3-205ENST00000559080 TNS2Q63HR2 1409 aa16.12■□□□□ 0.17
CHRNA3-205ENST00000559080 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
CHRNA3-205ENST00000559080 ABCC6O95255 1503 aa16.11■□□□□ 0.17
CHRNA3-205ENST00000559080 EXOC5O00471 708 aa16.11■□□□□ 0.17
CHRNA3-205ENST00000559080 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
CHRNA3-205ENST00000559080 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
CHRNA3-205ENST00000559080 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
CHRNA3-205ENST00000559080 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
CHRNA3-205ENST00000559080 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
CHRNA3-205ENST00000559080 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
CHRNA3-205ENST00000559080 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
CHRNA3-205ENST00000559080 ARXQ96QS3 562 aa16.08■□□□□ 0.16
CHRNA3-205ENST00000559080 SOX12O15370 315 aa16.07■□□□□ 0.16
CHRNA3-205ENST00000559080 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
CHRNA3-205ENST00000559080 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
CHRNA3-205ENST00000559080 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
CHRNA3-205ENST00000559080 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
CHRNA3-205ENST00000559080 ACSBG1Q96GR2 724 aa16.06■□□□□ 0.16
CHRNA3-205ENST00000559080 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
CHRNA3-205ENST00000559080 LY75O60449 1722 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 EVC2Q86UK5 1308 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
CHRNA3-205ENST00000559080 ERBB3P21860 1342 aa16.03■□□□□ 0.16
CHRNA3-205ENST00000559080 RGPD2P0DJD1 1756 aa16.01■□□□□ 0.15
CHRNA3-205ENST00000559080 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
CHRNA3-205ENST00000559080 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
CHRNA3-205ENST00000559080 USP31Q70CQ4 1352 aa16■□□□□ 0.15
CHRNA3-205ENST00000559080 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
CHRNA3-205ENST00000559080 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
CHRNA3-205ENST00000559080 IL2RBP14784 551 aa16■□□□□ 0.15
CHRNA3-205ENST00000559080 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
CHRNA3-205ENST00000559080 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
CHRNA3-205ENST00000559080 GPR162Q16538 588 aa15.99■□□□□ 0.15
CHRNA3-205ENST00000559080 SLC16A10Q8TF71 515 aa15.99■□□□□ 0.15
CHRNA3-205ENST00000559080 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
CHRNA3-205ENST00000559080 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
CHRNA3-205ENST00000559080 NLRP2Q9NX02 1062 aa15.98■□□□□ 0.15
CHRNA3-205ENST00000559080 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
CHRNA3-205ENST00000559080 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
CHRNA3-205ENST00000559080 GIGYF1O75420 1035 aaPredicted RBP15.96■□□□□ 0.15
CHRNA3-205ENST00000559080 SBNO2Q9Y2G9 1366 aa15.96■□□□□ 0.15
CHRNA3-205ENST00000559080 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
CHRNA3-205ENST00000559080 NME9Q86XW9 330 aa15.95■□□□□ 0.14
CHRNA3-205ENST00000559080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHRNA3-205ENST00000559080 NLGN2Q8NFZ4 835 aa15.95■□□□□ 0.14
CHRNA3-205ENST00000559080 ANKRD24Q8TF21 1146 aa15.95■□□□□ 0.14
CHRNA3-205ENST00000559080 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
CHRNA3-205ENST00000559080 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
CHRNA3-205ENST00000559080 KCNQ4P56696 695 aa15.93■□□□□ 0.14
CHRNA3-205ENST00000559080 NSD2O96028 1365 aa15.92■□□□□ 0.14
CHRNA3-205ENST00000559080 POLD1P28340 1107 aa15.92■□□□□ 0.14
CHRNA3-205ENST00000559080 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHRNA3-205ENST00000559080 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
CHRNA3-205ENST00000559080 C5P01031 1676 aa15.91■□□□□ 0.14
CHRNA3-205ENST00000559080 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms