RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 USP6P35125 1406 aa15.24■□□□□ 0.03
CTDSPL2-203ENST00000558791 NLRP6P59044 892 aa15.23■□□□□ 0.03
CTDSPL2-203ENST00000558791 DDB1Q16531 1140 aa15.23■□□□□ 0.03
CTDSPL2-203ENST00000558791 BCL9O00512 1426 aa15.23■□□□□ 0.03
CTDSPL2-203ENST00000558791 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
CTDSPL2-203ENST00000558791 YY1P25490 414 aa15.22■□□□□ 0.03
CTDSPL2-203ENST00000558791 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
CTDSPL2-203ENST00000558791 BCL11BQ9C0K0 894 aaPredicted RBP15.22■□□□□ 0.03
CTDSPL2-203ENST00000558791 COL18A1P39060 1754 aa15.21■□□□□ 0.03
CTDSPL2-203ENST00000558791 LRRC37A3O60309 1634 aa15.21■□□□□ 0.03
CTDSPL2-203ENST00000558791 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
CTDSPL2-203ENST00000558791 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
CTDSPL2-203ENST00000558791 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
CTDSPL2-203ENST00000558791 AKAP12Q02952 1782 aa15.21■□□□□ 0.02
CTDSPL2-203ENST00000558791 WDR17Q8IZU2 1322 aa15.2■□□□□ 0.02
CTDSPL2-203ENST00000558791 TOM1L2Q6ZVM7 507 aa15.2■□□□□ 0.02
CTDSPL2-203ENST00000558791 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
CTDSPL2-203ENST00000558791 CABP1Q9NZU7 370 aa15.2■□□□□ 0.02
CTDSPL2-203ENST00000558791 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
CTDSPL2-203ENST00000558791 PIK3C2AO00443 1686 aa15.18■□□□□ 0.02
CTDSPL2-203ENST00000558791 TRPM1Q7Z4N2 1603 aa15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 CASZ1Q86V15 1759 aa15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 ABCC6O95255 1503 aa15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
CTDSPL2-203ENST00000558791 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
CTDSPL2-203ENST00000558791 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
CTDSPL2-203ENST00000558791 RGPD5Q99666 1765 aa15.15■□□□□ 0.02
CTDSPL2-203ENST00000558791 CCDC7Q96M83 1385 aa15.14■□□□□ 0.01
CTDSPL2-203ENST00000558791 EXOC5O00471 708 aa15.14■□□□□ 0.01
CTDSPL2-203ENST00000558791 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
CTDSPL2-203ENST00000558791 AXIN2Q9Y2T1 843 aa15.14■□□□□ 0.01
CTDSPL2-203ENST00000558791 TTC21BQ7Z4L5 1316 aa15.14■□□□□ 0.01
CTDSPL2-203ENST00000558791 CSB-PGBD3P0DP91 1061 aa15.12■□□□□ 0.01
CTDSPL2-203ENST00000558791 ANO8Q9HCE9 1232 aaPredicted RBP15.12■□□□□ 0.01
CTDSPL2-203ENST00000558791 STK32BQ9NY57 414 aa15.12■□□□□ 0.01
CTDSPL2-203ENST00000558791 PROM2Q8N271 834 aa15.11■□□□□ 0.01
CTDSPL2-203ENST00000558791 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
CTDSPL2-203ENST00000558791 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
CTDSPL2-203ENST00000558791 CHD4Q14839 1912 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 NFAT5O94916 1531 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
CTDSPL2-203ENST00000558791 MTFR1LQ9H019 292 aa15.08■□□□□ 0
CTDSPL2-203ENST00000558791 NHSQ6T4R5 1651 aa15.08■□□□□ 0
CTDSPL2-203ENST00000558791 MON2Q7Z3U7 1717 aa15.08■□□□□ 0
CTDSPL2-203ENST00000558791 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
CTDSPL2-203ENST00000558791 PTGER2P43116 358 aa15.07■□□□□ 0
CTDSPL2-203ENST00000558791 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
CTDSPL2-203ENST00000558791 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
CTDSPL2-203ENST00000558791 USP31Q70CQ4 1352 aa15.07■□□□□ 0
CTDSPL2-203ENST00000558791 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
CTDSPL2-203ENST00000558791 MYOM1P52179 1685 aa15.06■□□□□ 0
CTDSPL2-203ENST00000558791 ZBTB7AO95365 584 aa15.06■□□□□ 0
CTDSPL2-203ENST00000558791 ERBB3P21860 1342 aa15.04■□□□□ -0
CTDSPL2-203ENST00000558791 SYT17Q9BSW7 474 aa15.04■□□□□ -0
CTDSPL2-203ENST00000558791 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
CTDSPL2-203ENST00000558791 LTN1O94822 1766 aa15.03■□□□□ -0
CTDSPL2-203ENST00000558791 MAP3K5Q99683 1374 aa15.03■□□□□ -0
CTDSPL2-203ENST00000558791 SOX12O15370 315 aa15.03■□□□□ -0
CTDSPL2-203ENST00000558791 IL2RBP14784 551 aa15.03■□□□□ -0
CTDSPL2-203ENST00000558791 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
CTDSPL2-203ENST00000558791 BTAF1O14981 1849 aa15.02■□□□□ -0
CTDSPL2-203ENST00000558791 SGIP1Q9BQI5 828 aa15.02■□□□□ -0
CTDSPL2-203ENST00000558791 FHDC1Q9C0D6 1143 aaPredicted RBP15.02■□□□□ -0
CTDSPL2-203ENST00000558791 RNF39Q9H2S5 420 aa15.02■□□□□ -0
CTDSPL2-203ENST00000558791 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
CTDSPL2-203ENST00000558791 NLRP2Q9NX02 1062 aa15.01□□□□□ -0.01
CTDSPL2-203ENST00000558791 PAPPAQ13219 1627 aa15.01□□□□□ -0.01
CTDSPL2-203ENST00000558791 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
CTDSPL2-203ENST00000558791 HDGFL2Q7Z4V5 671 aaPredicted RBP15□□□□□ -0.01
CTDSPL2-203ENST00000558791 ZNF784Q8NCA9 323 aaPredicted RBP15□□□□□ -0.01
CTDSPL2-203ENST00000558791 PUS7Q96PZ0 661 aaKnown RBP15□□□□□ -0.01
CTDSPL2-203ENST00000558791 ARXQ96QS3 562 aa15□□□□□ -0.01
CTDSPL2-203ENST00000558791 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
CTDSPL2-203ENST00000558791 UTRNP46939 3433 aa14.99□□□□□ -0.01
CTDSPL2-203ENST00000558791 SLC27A3Q5K4L6 730 aa14.99□□□□□ -0.01
CTDSPL2-203ENST00000558791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■□ 22.1
CTDSPL2-203ENST00000558791 EDC4Q6P2E9 1401 aaKnown RBP14.99□□□□□ -0.01
CTDSPL2-203ENST00000558791 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
CTDSPL2-203ENST00000558791 ACSBG1Q96GR2 724 aa14.98□□□□□ -0.01
CTDSPL2-203ENST00000558791 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
CTDSPL2-203ENST00000558791 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
CTDSPL2-203ENST00000558791 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
CTDSPL2-203ENST00000558791 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
CTDSPL2-203ENST00000558791 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
CTDSPL2-203ENST00000558791 HMGB2P26583 209 aaKnown RBP14.95□□□□□ -0.02
CTDSPL2-203ENST00000558791 NME9Q86XW9 330 aa14.95□□□□□ -0.02
CTDSPL2-203ENST00000558791 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
CTDSPL2-203ENST00000558791 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
CTDSPL2-203ENST00000558791 IP6K1Q92551 441 aa14.94□□□□□ -0.02
CTDSPL2-203ENST00000558791 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
CTDSPL2-203ENST00000558791 POLD1P28340 1107 aa14.93□□□□□ -0.02
CTDSPL2-203ENST00000558791 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
CTDSPL2-203ENST00000558791 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
CTDSPL2-203ENST00000558791 ZNF827Q17R98 1081 aa14.92□□□□□ -0.02
CTDSPL2-203ENST00000558791 SLC12A5Q9H2X9 1139 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms