RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
CASC4-205ENST00000558735 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
CASC4-205ENST00000558735 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
CASC4-205ENST00000558735 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
CASC4-205ENST00000558735 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
CASC4-205ENST00000558735 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
CASC4-205ENST00000558735 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
CASC4-205ENST00000558735 PROM2Q8N271 834 aa16.38■□□□□ 0.21
CASC4-205ENST00000558735 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
CASC4-205ENST00000558735 CPSF1Q10570 1443 aaKnown RBP16.37■□□□□ 0.21
CASC4-205ENST00000558735 SLIT3O75094 1523 aa16.37■□□□□ 0.21
CASC4-205ENST00000558735 DDB1Q16531 1140 aa16.37■□□□□ 0.21
CASC4-205ENST00000558735 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
CASC4-205ENST00000558735 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
CASC4-205ENST00000558735 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
CASC4-205ENST00000558735 PTGER2P43116 358 aa16.36■□□□□ 0.21
CASC4-205ENST00000558735 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
CASC4-205ENST00000558735 UTRNP46939 3433 aa16.36■□□□□ 0.21
CASC4-205ENST00000558735 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
CASC4-205ENST00000558735 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
CASC4-205ENST00000558735 TTC21AQ8NDW8 1320 aa16.35■□□□□ 0.21
CASC4-205ENST00000558735 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
CASC4-205ENST00000558735 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
CASC4-205ENST00000558735 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
CASC4-205ENST00000558735 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
CASC4-205ENST00000558735 WDR17Q8IZU2 1322 aa16.34■□□□□ 0.21
CASC4-205ENST00000558735 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
CASC4-205ENST00000558735 COL18A1P39060 1754 aa16.33■□□□□ 0.21
CASC4-205ENST00000558735 SOX12O15370 315 aa16.33■□□□□ 0.2
CASC4-205ENST00000558735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.2
CASC4-205ENST00000558735 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
CASC4-205ENST00000558735 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
CASC4-205ENST00000558735 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
CASC4-205ENST00000558735 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
CASC4-205ENST00000558735 PUS7Q96PZ0 661 aaKnown RBP16.31■□□□□ 0.2
CASC4-205ENST00000558735 PIK3C2AO00443 1686 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 NME9Q86XW9 330 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 TESK2Q96S53 571 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 SGIP1Q9BQI5 828 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
CASC4-205ENST00000558735 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
CASC4-205ENST00000558735 TXNRD1Q16881 649 aa16.29■□□□□ 0.2
CASC4-205ENST00000558735 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
CASC4-205ENST00000558735 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
CASC4-205ENST00000558735 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
CASC4-205ENST00000558735 MYOM1P52179 1685 aa16.28■□□□□ 0.2
CASC4-205ENST00000558735 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
CASC4-205ENST00000558735 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
CASC4-205ENST00000558735 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
CASC4-205ENST00000558735 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
CASC4-205ENST00000558735 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
CASC4-205ENST00000558735 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
CASC4-205ENST00000558735 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
CASC4-205ENST00000558735 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
CASC4-205ENST00000558735 TERF2IPQ9NYB0 399 aa16.26■□□□□ 0.19
CASC4-205ENST00000558735 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
CASC4-205ENST00000558735 ABCC6O95255 1503 aa16.25■□□□□ 0.19
CASC4-205ENST00000558735 EXOC5O00471 708 aa16.25■□□□□ 0.19
CASC4-205ENST00000558735 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
CASC4-205ENST00000558735 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
CASC4-205ENST00000558735 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
CASC4-205ENST00000558735 NFAT5O94916 1531 aa16.23■□□□□ 0.19
CASC4-205ENST00000558735 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
CASC4-205ENST00000558735 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
CASC4-205ENST00000558735 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
CASC4-205ENST00000558735 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
CASC4-205ENST00000558735 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
CASC4-205ENST00000558735 ARXQ96QS3 562 aa16.2■□□□□ 0.18
CASC4-205ENST00000558735 NHSQ6T4R5 1651 aa16.2■□□□□ 0.18
CASC4-205ENST00000558735 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
CASC4-205ENST00000558735 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
CASC4-205ENST00000558735 CHD4Q14839 1912 aa16.19■□□□□ 0.18
CASC4-205ENST00000558735 ERBB3P21860 1342 aa16.19■□□□□ 0.18
CASC4-205ENST00000558735 FBLN1P23142 703 aa16.18■□□□□ 0.18
CASC4-205ENST00000558735 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
CASC4-205ENST00000558735 IP6K1Q92551 441 aa16.18■□□□□ 0.18
CASC4-205ENST00000558735 CEP350Q5VT06 3117 aa16.18■□□□□ 0.18
CASC4-205ENST00000558735 GOLGB1Q14789 3259 aaKnown RBP16.18■□□□□ 0.18
CASC4-205ENST00000558735 TMF1P82094 1093 aa16.16■□□□□ 0.18
CASC4-205ENST00000558735 SENP3-EIF4A1A0A087X0R7 540 aa16.15■□□□□ 0.18
CASC4-205ENST00000558735 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
CASC4-205ENST00000558735 COG3Q96JB2 828 aa16.15■□□□□ 0.18
CASC4-205ENST00000558735 USP47Q96K76 1375 aa16.14■□□□□ 0.17
CASC4-205ENST00000558735 FYB1O15117 783 aa16.14■□□□□ 0.17
CASC4-205ENST00000558735 IL2RBP14784 551 aa16.14■□□□□ 0.17
CASC4-205ENST00000558735 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
CASC4-205ENST00000558735 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.17
CASC4-205ENST00000558735 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
CASC4-205ENST00000558735 AKT1S1Q96B36 256 aa16.13■□□□□ 0.17
CASC4-205ENST00000558735 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
CASC4-205ENST00000558735 USP54Q70EL1 1684 aa16.13■□□□□ 0.17
CASC4-205ENST00000558735 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
CASC4-205ENST00000558735 SLC27A3Q5K4L6 730 aa16.12■□□□□ 0.17
CASC4-205ENST00000558735 LTV1Q96GA3 475 aaPredicted RBP16.12■□□□□ 0.17
CASC4-205ENST00000558735 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
CASC4-205ENST00000558735 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
CASC4-205ENST00000558735 ANKRD36BQ8N2N9 1353 aa16.12■□□□□ 0.17
CASC4-205ENST00000558735 HOXC9P31274 260 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms