RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FAM69CQ0P6D2 419 aa7□□□□□ -1.29
SPG11-211ENST00000558561 C14orf37Q86TY3 774 aa7□□□□□ -1.29
SPG11-211ENST00000558561 BAP1Q92560 729 aa7□□□□□ -1.29
SPG11-211ENST00000558561 TNIKQ9UKE5 1360 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 APBB1O00213 710 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 ZBTB24O43167 697 aaPredicted RBP6.99□□□□□ -1.29
SPG11-211ENST00000558561 GPR37L1O60883 481 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 FKBPLQ9UIM3 349 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 TIMELESSQ9UNS1 1208 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 NDUFB9Q9Y6M9 179 aa6.99□□□□□ -1.29
SPG11-211ENST00000558561 UGGT2Q9NYU1 1516 aa6.98□□□□□ -1.29
SPG11-211ENST00000558561 SLC19A1P41440 591 aa6.98□□□□□ -1.29
SPG11-211ENST00000558561 ABL2P42684 1182 aa6.98□□□□□ -1.29
SPG11-211ENST00000558561 TRIM32Q13049 653 aa6.98□□□□□ -1.29
SPG11-211ENST00000558561 RAD21O60216 631 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 RPIAP49247 311 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 PRM3Q9NNZ6 103 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 PLB1Q6P1J6 1458 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 KIF13AQ9H1H9 1805 aa6.97□□□□□ -1.29
SPG11-211ENST00000558561 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.29
SPG11-211ENST00000558561 CARMIL2Q6F5E8 1435 aa6.96□□□□□ -1.3
SPG11-211ENST00000558561 CD2BP2O95400 341 aaKnown RBP6.96□□□□□ -1.3
SPG11-211ENST00000558561 SH3BP2P78314 561 aa6.96□□□□□ -1.3
SPG11-211ENST00000558561 IRF5Q13568 498 aa6.96□□□□□ -1.3
SPG11-211ENST00000558561 ARMC2Q8NEN0 867 aa6.96□□□□□ -1.3
SPG11-211ENST00000558561 ZMYND15Q9H091 742 aa6.96□□□□□ -1.3
SPG11-211ENST00000558561 UACAQ9BZF9 1416 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 KIAA0556O60303 1618 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 SKOR1P84550 965 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 ZNF511Q8NB15 262 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 PNMA1Q8ND90 353 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
SPG11-211ENST00000558561 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
SPG11-211ENST00000558561 A6NJR5 290 aa6.94□□□□□ -1.3
SPG11-211ENST00000558561 NBPF14Q5TI25 921 aa6.94□□□□□ -1.3
SPG11-211ENST00000558561 SPRYD7Q5W111 196 aa6.94□□□□□ -1.3
SPG11-211ENST00000558561 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
SPG11-211ENST00000558561 FHOD3Q2V2M9 1422 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 ABCC2Q92887 1545 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 ZC3H4Q9UPT8 1303 aaKnown RBP6.93□□□□□ -1.3
SPG11-211ENST00000558561 EEA1Q15075 1411 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
SPG11-211ENST00000558561 FBXO45P0C2W1 286 aa6.92□□□□□ -1.3
SPG11-211ENST00000558561 AGERQ15109 404 aa6.92□□□□□ -1.3
SPG11-211ENST00000558561 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
SPG11-211ENST00000558561 PROSER2Q86WR7 435 aaPredicted RBP6.92□□□□□ -1.3
SPG11-211ENST00000558561 FNBP4Q8N3X1 1017 aaPredicted RBP6.92□□□□□ -1.3
SPG11-211ENST00000558561 GPKOWQ92917 476 aaPredicted RBP eCLIP6.92□□□□□ -1.3
SPG11-211ENST00000558561 V9GY48 417 aaPredicted RBP6.92□□□□□ -1.3
SPG11-211ENST00000558561 ATP10BO94823 1461 aa6.92□□□□□ -1.3
SPG11-211ENST00000558561 ABCC10Q5T3U5 1492 aa6.92□□□□□ -1.3
SPG11-211ENST00000558561 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 ZBBXA8MT70 800 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 WNT7BP56706 349 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 PTK2Q05397 1052 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 VAC14Q08AM6 782 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
SPG11-211ENST00000558561 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 ZNF598Q86UK7 904 aaKnown RBP6.91□□□□□ -1.3
SPG11-211ENST00000558561 BPHLQ86WA6 291 aaPredicted RBP6.91□□□□□ -1.3
SPG11-211ENST00000558561 ARHGAP9Q9BRR9 750 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 UHRF1BP1LA0JNW5 1464 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 ABCA8O94911 1581 aa6.91□□□□□ -1.3
SPG11-211ENST00000558561 KIF21BO75037 1637 aa6.9□□□□□ -1.3
SPG11-211ENST00000558561 ZCCHC11Q5TAX3 1644 aaKnown RBP6.9□□□□□ -1.3
SPG11-211ENST00000558561 TRAK2O60296 914 aa6.9□□□□□ -1.3
SPG11-211ENST00000558561 ERICH6Q7L0X2 663 aa6.9□□□□□ -1.3
SPG11-211ENST00000558561 SH3RF1Q7Z6J0 888 aa6.9□□□□□ -1.3
SPG11-211ENST00000558561 ZNF330Q9Y3S2 320 aaPredicted RBP6.9□□□□□ -1.3
SPG11-211ENST00000558561 GPSM3Q9Y4H4 160 aa6.9□□□□□ -1.3
SPG11-211ENST00000558561 KDM5BQ9UGL1 1544 aa6.9□□□□□ -1.31
SPG11-211ENST00000558561 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 FOXC1Q12948 553 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 NR1H3Q13133 447 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 ADAM32Q8TC27 787 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
SPG11-211ENST00000558561 SAMD9Q5K651 1589 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 DIP2BQ9P265 1576 aa6.89□□□□□ -1.31
SPG11-211ENST00000558561 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 GOLGA3Q08378 1498 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 ARHGAP35Q9NRY4 1499 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 WNT7AO00755 349 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 WWC1Q8IX03 1113 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 MRGPRX2Q96LB1 330 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 PKD2L1Q9P0L9 805 aa6.88□□□□□ -1.31
SPG11-211ENST00000558561 ZNF777Q9ULD5 760 aaPredicted RBP6.88□□□□□ -1.31
SPG11-211ENST00000558561 PPRC1Q5VV67 1664 aaKnown RBP6.87□□□□□ -1.31
SPG11-211ENST00000558561 EPRSP07814 1512 aaKnown RBP6.87□□□□□ -1.31
SPG11-211ENST00000558561 RGS20O76081 388 aa6.87□□□□□ -1.31
SPG11-211ENST00000558561 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
SPG11-211ENST00000558561 TNFRSF10AO00220 468 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms