RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
VPS18-202ENST00000558474 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
VPS18-202ENST00000558474 JCADQ9P266 1359 aa19.81■□□□□ 0.76
VPS18-202ENST00000558474 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
VPS18-202ENST00000558474 EIF4A2Q14240 407 aaKnown RBP19.8■□□□□ 0.76
VPS18-202ENST00000558474 CABLES1Q8TDN4 633 aa19.8■□□□□ 0.76
VPS18-202ENST00000558474 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
VPS18-202ENST00000558474 ZC3H6P61129 1189 aaKnown RBP19.79■□□□□ 0.76
VPS18-202ENST00000558474 KIAA0232Q92628 1395 aa19.79■□□□□ 0.76
VPS18-202ENST00000558474 FCHSD2O94868 740 aa19.78■□□□□ 0.76
VPS18-202ENST00000558474 U2AF1L5P0DN76 240 aaPredicted RBP19.78■□□□□ 0.76
VPS18-202ENST00000558474 U2AF1Q01081 240 aaKnown RBP eCLIP19.78■□□□□ 0.76
VPS18-202ENST00000558474 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
VPS18-202ENST00000558474 COL14A1Q05707 1796 aaKnown RBP19.78■□□□□ 0.76
VPS18-202ENST00000558474 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
VPS18-202ENST00000558474 RGPD5Q99666 1765 aa19.77■□□□□ 0.76
VPS18-202ENST00000558474 NGEFQ8N5V2 710 aa19.76■□□□□ 0.75
VPS18-202ENST00000558474 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
VPS18-202ENST00000558474 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
VPS18-202ENST00000558474 PRDM11Q9NQV5 511 aa19.75■□□□□ 0.75
VPS18-202ENST00000558474 SPATA31A6Q5VVP1 1343 aa19.75■□□□□ 0.75
VPS18-202ENST00000558474 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
VPS18-202ENST00000558474 RUNDC1Q96C34 613 aa19.74■□□□□ 0.75
VPS18-202ENST00000558474 KDRP35968 1356 aa19.73■□□□□ 0.75
VPS18-202ENST00000558474 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
VPS18-202ENST00000558474 ERBB3P21860 1342 aa19.73■□□□□ 0.75
VPS18-202ENST00000558474 ZBTB7CA1YPR0 619 aa19.72■□□□□ 0.75
VPS18-202ENST00000558474 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
VPS18-202ENST00000558474 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
VPS18-202ENST00000558474 NEFMP07197 916 aa19.71■□□□□ 0.75
VPS18-202ENST00000558474 ANKRD24Q8TF21 1146 aa19.71■□□□□ 0.75
VPS18-202ENST00000558474 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
VPS18-202ENST00000558474 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
VPS18-202ENST00000558474 HSPA1LP34931 641 aa19.7■□□□□ 0.74
VPS18-202ENST00000558474 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
VPS18-202ENST00000558474 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
VPS18-202ENST00000558474 EYA1Q99502 592 aa19.7■□□□□ 0.74
VPS18-202ENST00000558474 NWD2Q9ULI1 1742 aa19.69■□□□□ 0.74
VPS18-202ENST00000558474 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
VPS18-202ENST00000558474 COL5A2P05997 1499 aaPredicted RBP19.68■□□□□ 0.74
VPS18-202ENST00000558474 FAM83GA6ND36 823 aa19.68■□□□□ 0.74
VPS18-202ENST00000558474 CHRNA2Q15822 529 aa19.68■□□□□ 0.74
VPS18-202ENST00000558474 SULT6B1Q6IMI4 303 aa19.68■□□□□ 0.74
VPS18-202ENST00000558474 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
VPS18-202ENST00000558474 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
VPS18-202ENST00000558474 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
VPS18-202ENST00000558474 LTV1Q96GA3 475 aaPredicted RBP19.67■□□□□ 0.74
VPS18-202ENST00000558474 PLCH1Q4KWH8 1693 aa19.67■□□□□ 0.74
VPS18-202ENST00000558474 WDR17Q8IZU2 1322 aa19.66■□□□□ 0.74
VPS18-202ENST00000558474 HMOX1P09601 288 aa19.65■□□□□ 0.74
VPS18-202ENST00000558474 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
VPS18-202ENST00000558474 NBPF6Q5VWK0 638 aa19.65■□□□□ 0.74
VPS18-202ENST00000558474 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
VPS18-202ENST00000558474 NBPF4Q96M43 638 aa19.65■□□□□ 0.74
VPS18-202ENST00000558474 APAF1O14727 1248 aa19.63■□□□□ 0.73
VPS18-202ENST00000558474 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
VPS18-202ENST00000558474 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
VPS18-202ENST00000558474 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
VPS18-202ENST00000558474 CSB-PGBD3P0DP91 1061 aa19.62■□□□□ 0.73
VPS18-202ENST00000558474 FBXO41Q8TF61 875 aa19.62■□□□□ 0.73
VPS18-202ENST00000558474 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
VPS18-202ENST00000558474 SLIT2O94813 1529 aa19.61■□□□□ 0.73
VPS18-202ENST00000558474 NUTM2BA6NNL0 878 aaPredicted RBP19.61■□□□□ 0.73
VPS18-202ENST00000558474 NUTM2EB1AL46 878 aaPredicted RBP19.61■□□□□ 0.73
VPS18-202ENST00000558474 EVA1CP58658 441 aa19.61■□□□□ 0.73
VPS18-202ENST00000558474 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
VPS18-202ENST00000558474 NUTM2AQ8IVF1 878 aaPredicted RBP19.61■□□□□ 0.73
VPS18-202ENST00000558474 CRB1P82279 1406 aa19.6■□□□□ 0.73
VPS18-202ENST00000558474 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
VPS18-202ENST00000558474 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
VPS18-202ENST00000558474 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
VPS18-202ENST00000558474 CARD10Q9BWT7 1032 aa19.6■□□□□ 0.73
VPS18-202ENST00000558474 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
VPS18-202ENST00000558474 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
VPS18-202ENST00000558474 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.59■□□□□ 0.73
VPS18-202ENST00000558474 LRP6O75581 1613 aa19.58■□□□□ 0.73
VPS18-202ENST00000558474 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.72
VPS18-202ENST00000558474 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
VPS18-202ENST00000558474 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
VPS18-202ENST00000558474 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
VPS18-202ENST00000558474 PARP4Q9UKK3 1724 aaKnown RBP19.57■□□□□ 0.72
VPS18-202ENST00000558474 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
VPS18-202ENST00000558474 LMOD3Q0VAK6 560 aa19.57■□□□□ 0.72
VPS18-202ENST00000558474 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
VPS18-202ENST00000558474 ZNF521Q96K83 1311 aa19.56■□□□□ 0.72
VPS18-202ENST00000558474 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
VPS18-202ENST00000558474 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
VPS18-202ENST00000558474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.56■□□□□ 0.72
VPS18-202ENST00000558474 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
VPS18-202ENST00000558474 USHBP1Q8N6Y0 703 aa19.55■□□□□ 0.72
VPS18-202ENST00000558474 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
VPS18-202ENST00000558474 STRN4Q9NRL3 753 aa19.55■□□□□ 0.72
VPS18-202ENST00000558474 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
VPS18-202ENST00000558474 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
VPS18-202ENST00000558474 RIPK4P57078 832 aa19.54■□□□□ 0.72
VPS18-202ENST00000558474 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
VPS18-202ENST00000558474 WDR63Q8IWG1 891 aa19.54■□□□□ 0.72
VPS18-202ENST00000558474 PKD1L3Q7Z443 1732 aa19.54■□□□□ 0.72
VPS18-202ENST00000558474 UNC5CLQ8IV45 518 aa19.53■□□□□ 0.72
VPS18-202ENST00000558474 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms