RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 KIF3AQ9Y496 699 aa13.73□□□□□ -0.21
PCAT29-201ENST00000558411 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
PCAT29-201ENST00000558411 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
PCAT29-201ENST00000558411 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
PCAT29-201ENST00000558411 TET3O43151 1660 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 UHRF1BP1LA0JNW5 1464 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 ZNF428Q96B54 188 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 SPTLC3Q9NUV7 552 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 IFT172Q9UG01 1749 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 ST18O60284 1047 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 CBX1P83916 185 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 NOLC1Q14978 699 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCAT29-201ENST00000558411 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
PCAT29-201ENST00000558411 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
PCAT29-201ENST00000558411 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
PCAT29-201ENST00000558411 PHF14O94880 888 aa13.71□□□□□ -0.21
PCAT29-201ENST00000558411 PKP1Q13835 747 aa13.71□□□□□ -0.21
PCAT29-201ENST00000558411 ZDHHC9Q9Y397 364 aa13.71□□□□□ -0.21
PCAT29-201ENST00000558411 CD109Q6YHK3 1445 aa13.71□□□□□ -0.22
PCAT29-201ENST00000558411 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
PCAT29-201ENST00000558411 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
PCAT29-201ENST00000558411 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
PCAT29-201ENST00000558411 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
PCAT29-201ENST00000558411 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
PCAT29-201ENST00000558411 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
PCAT29-201ENST00000558411 PDE4CQ08493 712 aa13.7□□□□□ -0.22
PCAT29-201ENST00000558411 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
PCAT29-201ENST00000558411 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
PCAT29-201ENST00000558411 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 NRXN1Q9ULB1 1477 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
PCAT29-201ENST00000558411 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
PCAT29-201ENST00000558411 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 ARHGAP45Q92619 1136 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
PCAT29-201ENST00000558411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCAT29-201ENST00000558411 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
PCAT29-201ENST00000558411 FEZ1Q99689 392 aa13.68□□□□□ -0.22
PCAT29-201ENST00000558411 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
PCAT29-201ENST00000558411 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
PCAT29-201ENST00000558411 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
PCAT29-201ENST00000558411 ANKRD7Q92527 254 aa13.67□□□□□ -0.22
PCAT29-201ENST00000558411 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
PCAT29-201ENST00000558411 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
PCAT29-201ENST00000558411 CFAP70Q5T0N1 1121 aa13.67□□□□□ -0.22
PCAT29-201ENST00000558411 RNF214Q8ND24 703 aa13.67□□□□□ -0.22
PCAT29-201ENST00000558411 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
PCAT29-201ENST00000558411 GSPT1P15170 499 aaKnown RBP13.66□□□□□ -0.22
PCAT29-201ENST00000558411 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
PCAT29-201ENST00000558411 KIF1BO60333 1816 aa13.66□□□□□ -0.22
PCAT29-201ENST00000558411 TTC22Q5TAA0 569 aa13.66□□□□□ -0.22
PCAT29-201ENST00000558411 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
PCAT29-201ENST00000558411 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
PCAT29-201ENST00000558411 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.23
PCAT29-201ENST00000558411 BRD1O95696 1058 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 TPM3P06753 285 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 CASC1Q6TDU7 716 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
PCAT29-201ENST00000558411 MCM2P49736 904 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
PCAT29-201ENST00000558411 TSC1Q92574 1164 aa13.64□□□□□ -0.23
PCAT29-201ENST00000558411 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
PCAT29-201ENST00000558411 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
PCAT29-201ENST00000558411 SYCP1Q15431 976 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 REC8O95072 547 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
PCAT29-201ENST00000558411 ABCC4O15439 1325 aa13.61□□□□□ -0.23
PCAT29-201ENST00000558411 ADGRF5Q8IZF2 1346 aa13.61□□□□□ -0.23
PCAT29-201ENST00000558411 ABCC1P33527 1531 aa13.61□□□□□ -0.23
PCAT29-201ENST00000558411 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
PCAT29-201ENST00000558411 ADCY5O95622 1261 aa13.6□□□□□ -0.23
PCAT29-201ENST00000558411 CUL4AQ13619 759 aa13.6□□□□□ -0.23
PCAT29-201ENST00000558411 INTS4Q96HW7 963 aaKnown RBP13.6□□□□□ -0.23
PCAT29-201ENST00000558411 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
PCAT29-201ENST00000558411 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
PCAT29-201ENST00000558411 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
PCAT29-201ENST00000558411 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
PCAT29-201ENST00000558411 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
PCAT29-201ENST00000558411 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
PCAT29-201ENST00000558411 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
PCAT29-201ENST00000558411 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
PCAT29-201ENST00000558411 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
PCAT29-201ENST00000558411 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.23
PCAT29-201ENST00000558411 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.23
PCAT29-201ENST00000558411 CCDC183Q5T5S1 534 aa13.58□□□□□ -0.23
PCAT29-201ENST00000558411 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.23
PCAT29-201ENST00000558411 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.23
PCAT29-201ENST00000558411 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.23
PCAT29-201ENST00000558411 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
PCAT29-201ENST00000558411 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
PCAT29-201ENST00000558411 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms