RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 AKAP12Q02952 1782 aa14.7□□□□□ -0.06
IGKV2D-28-202ENST00000558026 COL5A2P05997 1499 aaPredicted RBP14.7□□□□□ -0.06
IGKV2D-28-202ENST00000558026 KIF3CO14782 793 aa14.7□□□□□ -0.06
IGKV2D-28-202ENST00000558026 CRB1P82279 1406 aa14.68□□□□□ -0.06
IGKV2D-28-202ENST00000558026 COL24A1Q17RW2 1714 aa14.68□□□□□ -0.06
IGKV2D-28-202ENST00000558026 AATKQ6ZMQ8 1374 aa14.68□□□□□ -0.06
IGKV2D-28-202ENST00000558026 TULP4Q9NRJ4 1543 aa14.67□□□□□ -0.06
IGKV2D-28-202ENST00000558026 POLD1P28340 1107 aa14.67□□□□□ -0.06
IGKV2D-28-202ENST00000558026 POGKQ9P215 609 aa14.67□□□□□ -0.06
IGKV2D-28-202ENST00000558026 CPDO75976 1380 aa14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 ANKRD30BQ9BXX2 1392 aa14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 HTRA3P83110 453 aa14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 WNK3Q9BYP7 1800 aa14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 BCL9O00512 1426 aa14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
IGKV2D-28-202ENST00000558026 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
IGKV2D-28-202ENST00000558026 WDR90Q96KV7 1748 aa14.64□□□□□ -0.07
IGKV2D-28-202ENST00000558026 SPATA31E1Q6ZUB1 1445 aa14.64□□□□□ -0.07
IGKV2D-28-202ENST00000558026 ZBTB7CA1YPR0 619 aa14.63□□□□□ -0.07
IGKV2D-28-202ENST00000558026 C14orf93Q9H972 538 aaKnown RBP14.63□□□□□ -0.07
IGKV2D-28-202ENST00000558026 LRRC4BQ9NT99 713 aa14.62□□□□□ -0.07
IGKV2D-28-202ENST00000558026 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
IGKV2D-28-202ENST00000558026 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 JMYQ8N9B5 988 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 SLC16A10Q8TF71 515 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 KLRG1Q96E93 195 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 ACSBG1Q96GR2 724 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 NHSQ6T4R5 1651 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 PNPLA7Q6ZV29 1317 aa14.61□□□□□ -0.07
IGKV2D-28-202ENST00000558026 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
IGKV2D-28-202ENST00000558026 WWC3Q9ULE0 1092 aa14.6□□□□□ -0.07
IGKV2D-28-202ENST00000558026 QSER1Q2KHR3 1735 aa14.6□□□□□ -0.07
IGKV2D-28-202ENST00000558026 USP19O94966 1318 aa14.6□□□□□ -0.07
IGKV2D-28-202ENST00000558026 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
IGKV2D-28-202ENST00000558026 ABTB2Q8N961 1025 aa14.59□□□□□ -0.07
IGKV2D-28-202ENST00000558026 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
IGKV2D-28-202ENST00000558026 BTAF1O14981 1849 aa14.59□□□□□ -0.07
IGKV2D-28-202ENST00000558026 PCNTO95613 3336 aa14.59□□□□□ -0.07
IGKV2D-28-202ENST00000558026 ITSN1Q15811 1721 aa14.58□□□□□ -0.07
IGKV2D-28-202ENST00000558026 GCP02774 474 aa14.58□□□□□ -0.08
IGKV2D-28-202ENST00000558026 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
IGKV2D-28-202ENST00000558026 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
IGKV2D-28-202ENST00000558026 TRAK1Q9UPV9 953 aa14.57□□□□□ -0.08
IGKV2D-28-202ENST00000558026 ARHGEF28Q8N1W1 1705 aaKnown RBP14.57□□□□□ -0.08
IGKV2D-28-202ENST00000558026 KAT6BQ8WYB5 2073 aa14.56□□□□□ -0.08
IGKV2D-28-202ENST00000558026 TOMM70O94826 608 aa14.56□□□□□ -0.08
IGKV2D-28-202ENST00000558026 KCNQ4P56696 695 aa14.55□□□□□ -0.08
IGKV2D-28-202ENST00000558026 NUDT16Q96DE0 195 aaKnown RBP14.55□□□□□ -0.08
IGKV2D-28-202ENST00000558026 ACEP12821 1306 aa14.54□□□□□ -0.08
IGKV2D-28-202ENST00000558026 COL18A1P39060 1754 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 USP6P35125 1406 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 BRD4O60885 1362 aaPredicted RBP14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 EXOC5O00471 708 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 TFCP2L1Q9NZI6 479 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 AXIN2Q9Y2T1 843 aa14.53□□□□□ -0.08
IGKV2D-28-202ENST00000558026 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
IGKV2D-28-202ENST00000558026 WDR17Q8IZU2 1322 aa14.52□□□□□ -0.08
IGKV2D-28-202ENST00000558026 CDCA7Q9BWT1 371 aaPredicted RBP14.52□□□□□ -0.09
IGKV2D-28-202ENST00000558026 RGPD5Q99666 1765 aa14.52□□□□□ -0.09
IGKV2D-28-202ENST00000558026 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
IGKV2D-28-202ENST00000558026 NMRK2Q9NPI5 230 aa14.51□□□□□ -0.09
IGKV2D-28-202ENST00000558026 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
IGKV2D-28-202ENST00000558026 TNS2Q63HR2 1409 aa14.5□□□□□ -0.09
IGKV2D-28-202ENST00000558026 MSH5O43196 834 aa14.49□□□□□ -0.09
IGKV2D-28-202ENST00000558026 HSPA1AP0DMV8 641 aaKnown RBP14.49□□□□□ -0.09
IGKV2D-28-202ENST00000558026 HSPA1BP0DMV9 641 aaKnown RBP14.49□□□□□ -0.09
IGKV2D-28-202ENST00000558026 CARD10Q9BWT7 1032 aa14.47□□□□□ -0.09
IGKV2D-28-202ENST00000558026 CD2APQ9Y5K6 639 aa14.47□□□□□ -0.09
IGKV2D-28-202ENST00000558026 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
IGKV2D-28-202ENST00000558026 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CSB-PGBD3P0DP91 1061 aa14.45□□□□□ -0.1
IGKV2D-28-202ENST00000558026 SLC27A3Q5K4L6 730 aa14.45□□□□□ -0.1
IGKV2D-28-202ENST00000558026 RBM46Q8TBY0 533 aaKnown RBP14.45□□□□□ -0.1
IGKV2D-28-202ENST00000558026 ABCC6O95255 1503 aa14.45□□□□□ -0.1
IGKV2D-28-202ENST00000558026 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
IGKV2D-28-202ENST00000558026 SLIT3O75094 1523 aa14.44□□□□□ -0.1
IGKV2D-28-202ENST00000558026 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
IGKV2D-28-202ENST00000558026 NLRP6P59044 892 aa14.43□□□□□ -0.1
IGKV2D-28-202ENST00000558026 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
IGKV2D-28-202ENST00000558026 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
IGKV2D-28-202ENST00000558026 CCDC7Q96M83 1385 aa14.4□□□□□ -0.1
IGKV2D-28-202ENST00000558026 C16orf71Q8IYS4 520 aaPredicted RBP14.4□□□□□ -0.1
IGKV2D-28-202ENST00000558026 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
IGKV2D-28-202ENST00000558026 LY75O60449 1722 aa14.39□□□□□ -0.11
IGKV2D-28-202ENST00000558026 SOX12O15370 315 aa14.39□□□□□ -0.11
IGKV2D-28-202ENST00000558026 FSTL1Q12841 308 aa14.39□□□□□ -0.11
IGKV2D-28-202ENST00000558026 ARHGEF25Q86VW2 580 aa14.38□□□□□ -0.11
IGKV2D-28-202ENST00000558026 PPARGC1BQ86YN6 1023 aaKnown RBP14.38□□□□□ -0.11
IGKV2D-28-202ENST00000558026 SYTL4Q96C24 671 aaPredicted RBP14.35□□□□□ -0.11
IGKV2D-28-202ENST00000558026 CCNL1Q9UK58 526 aaPredicted RBP14.35□□□□□ -0.11
IGKV2D-28-202ENST00000558026 IL2RBP14784 551 aa14.33□□□□□ -0.12
IGKV2D-28-202ENST00000558026 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
IGKV2D-28-202ENST00000558026 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
IGKV2D-28-202ENST00000558026 KCPQ6ZWJ8 1503 aa14.32□□□□□ -0.12
IGKV2D-28-202ENST00000558026 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms