RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 MORC1Q86VD1 984 aa34.89■■■■□ 3.18
SMAD6-202ENST00000557916 COL18A1P39060 1754 aa34.89■■■■□ 3.18
SMAD6-202ENST00000557916 ANKRD26Q9UPS8 1709 aa34.89■■■■□ 3.18
SMAD6-202ENST00000557916 LTN1O94822 1766 aa34.88■■■■□ 3.17
SMAD6-202ENST00000557916 DDX10Q13206 875 aaKnown RBP34.88■■■■□ 3.17
SMAD6-202ENST00000557916 RXRBP28702 533 aa34.87■■■■□ 3.17
SMAD6-202ENST00000557916 TNNT2P45379 298 aaPredicted RBP34.87■■■■□ 3.17
SMAD6-202ENST00000557916 CC2D1BQ5T0F9 858 aaKnown RBP34.87■■■■□ 3.17
SMAD6-202ENST00000557916 CCDC9Q9Y3X0 531 aaKnown RBP34.87■■■■□ 3.17
SMAD6-202ENST00000557916 RBM6P78332 1123 aaKnown RBP34.86■■■■□ 3.17
SMAD6-202ENST00000557916 ABCC6O95255 1503 aa34.85■■■■□ 3.17
SMAD6-202ENST00000557916 AMPHP49418 695 aa34.85■■■■□ 3.17
SMAD6-202ENST00000557916 GJD4Q96KN9 370 aaPredicted RBP34.85■■■■□ 3.17
SMAD6-202ENST00000557916 NPC1L1Q9UHC9 1359 aa34.85■■■■□ 3.17
SMAD6-202ENST00000557916 COL5A2P05997 1499 aaPredicted RBP34.84■■■■□ 3.17
SMAD6-202ENST00000557916 IP6K1Q92551 441 aa34.84■■■■□ 3.17
SMAD6-202ENST00000557916 CNGB1Q14028 1251 aaPredicted RBP34.82■■■■□ 3.17
SMAD6-202ENST00000557916 LARP1Q6PKG0 1096 aaKnown RBP34.81■■■■□ 3.16
SMAD6-202ENST00000557916 HOXC9P31274 260 aa34.81■■■■□ 3.16
SMAD6-202ENST00000557916 EMILIN1Q9Y6C2 1016 aa34.81■■■■□ 3.16
SMAD6-202ENST00000557916 RTL1A6NKG5 1358 aa34.79■■■■□ 3.16
SMAD6-202ENST00000557916 SPATA31A5Q5VU36 1347 aa34.78■■■■□ 3.16
SMAD6-202ENST00000557916 SPATA31A7Q8IWB4 1347 aa34.78■■■■□ 3.16
SMAD6-202ENST00000557916 RGPD5Q99666 1765 aa34.78■■■■□ 3.16
SMAD6-202ENST00000557916 POLKQ9UBT6 870 aa34.78■■■■□ 3.16
SMAD6-202ENST00000557916 BLMP54132 1417 aaPredicted RBP34.78■■■■□ 3.16
SMAD6-202ENST00000557916 CSB-PGBD3P0DP91 1061 aa34.77■■■■□ 3.16
SMAD6-202ENST00000557916 KIF24Q5T7B8 1368 aa34.76■■■■□ 3.16
SMAD6-202ENST00000557916 PPM1GO15355 546 aaPredicted RBP34.76■■■■□ 3.16
SMAD6-202ENST00000557916 WDR17Q8IZU2 1322 aa34.76■■■■□ 3.15
SMAD6-202ENST00000557916 ANKRD24Q8TF21 1146 aa34.75■■■■□ 3.15
SMAD6-202ENST00000557916 GLI3P10071 1580 aa34.75■■■■□ 3.15
SMAD6-202ENST00000557916 TOM1L2Q6ZVM7 507 aa34.74■■■■□ 3.15
SMAD6-202ENST00000557916 ILDR2Q71H61 639 aa34.74■■■■□ 3.15
SMAD6-202ENST00000557916 ERBB3P21860 1342 aa34.74■■■■□ 3.15
SMAD6-202ENST00000557916 SPATA31A1Q5TZJ5 1347 aa34.74■■■■□ 3.15
SMAD6-202ENST00000557916 FLT4P35916 1363 aa34.74■■■■□ 3.15
SMAD6-202ENST00000557916 USP35Q9P2H5 1018 aa34.73■■■■□ 3.15
SMAD6-202ENST00000557916 CRB1P82279 1406 aa34.73■■■■□ 3.15
SMAD6-202ENST00000557916 MAP2P11137 1827 aaKnown RBP34.72■■■■□ 3.15
SMAD6-202ENST00000557916 HSP90AB2PQ58FF8 381 aa34.72■■■■□ 3.15
SMAD6-202ENST00000557916 LTV1Q96GA3 475 aaPredicted RBP34.72■■■■□ 3.15
SMAD6-202ENST00000557916 PEAK1Q9H792 1746 aa34.71■■■■□ 3.15
SMAD6-202ENST00000557916 INSRP06213 1382 aa34.69■■■■□ 3.14
SMAD6-202ENST00000557916 CDK12Q9NYV4 1490 aaPredicted RBP34.68■■■■□ 3.14
SMAD6-202ENST00000557916 FAM98CQ17RN3 349 aaKnown RBP34.67■■■■□ 3.14
SMAD6-202ENST00000557916 TCP11L2Q8N4U5 519 aa34.67■■■■□ 3.14
SMAD6-202ENST00000557916 NLRP2Q9NX02 1062 aa34.67■■■■□ 3.14
SMAD6-202ENST00000557916 CARD10Q9BWT7 1032 aa34.66■■■■□ 3.14
SMAD6-202ENST00000557916 ONECUT3O60422 494 aaPredicted RBP34.65■■■■□ 3.14
SMAD6-202ENST00000557916 RGS12O14924 1447 aa34.65■■■■□ 3.14
SMAD6-202ENST00000557916 SMG6Q86US8 1419 aaKnown RBP34.65■■■■□ 3.14
SMAD6-202ENST00000557916 THRAP3Q9Y2W1 955 aaKnown RBP34.64■■■■□ 3.14
SMAD6-202ENST00000557916 BARGINQ6ZT62 677 aa34.62■■■■□ 3.13
SMAD6-202ENST00000557916 A0A0G2JS52 829 aa34.61■■■■□ 3.13
SMAD6-202ENST00000557916 MYT1Q01538 1121 aa34.61■■■■□ 3.13
SMAD6-202ENST00000557916 SEPT12Q8IYM1 358 aa34.61■■■■□ 3.13
SMAD6-202ENST00000557916 MTHFSP49914 203 aa34.6■■■■□ 3.13
SMAD6-202ENST00000557916 FAM208AQ9UK61 1670 aaKnown RBP34.56■■■■□ 3.12
SMAD6-202ENST00000557916 PARD3Q8TEW0 1356 aa34.55■■■■□ 3.12
SMAD6-202ENST00000557916 NBPF6Q5VWK0 638 aa34.55■■■■□ 3.12
SMAD6-202ENST00000557916 NBPF4Q96M43 638 aa34.55■■■■□ 3.12
SMAD6-202ENST00000557916 EIF4A2Q14240 407 aaKnown RBP34.54■■■■□ 3.12
SMAD6-202ENST00000557916 PPP2R1AP30153 589 aa34.53■■■■□ 3.12
SMAD6-202ENST00000557916 THSD7AQ9UPZ6 1657 aa34.52■■■■□ 3.12
SMAD6-202ENST00000557916 CDCA7Q9BWT1 371 aaPredicted RBP34.51■■■■□ 3.12
SMAD6-202ENST00000557916 RALBP1Q15311 655 aa34.5■■■■□ 3.11
SMAD6-202ENST00000557916 RGPD2P0DJD1 1756 aa34.49■■■■□ 3.11
SMAD6-202ENST00000557916 USHBP1Q8N6Y0 703 aa34.48■■■■□ 3.11
SMAD6-202ENST00000557916 IL2RBP14784 551 aa34.47■■■■□ 3.11
SMAD6-202ENST00000557916 EYA1Q99502 592 aa34.47■■■■□ 3.11
SMAD6-202ENST00000557916 DISP2A7MBM2 1401 aa34.46■■■■□ 3.11
SMAD6-202ENST00000557916 KRT27Q7Z3Y8 459 aa34.45■■■■□ 3.11
SMAD6-202ENST00000557916 WNK3Q9BYP7 1800 aa34.43■■■■□ 3.1
SMAD6-202ENST00000557916 IL13P35225 146 aa34.43■■■■□ 3.1
SMAD6-202ENST00000557916 DDB1Q16531 1140 aa34.43■■■■□ 3.1
SMAD6-202ENST00000557916 BRWD3Q6RI45 1802 aa34.42■■■■□ 3.1
SMAD6-202ENST00000557916 CFAP53Q96M91 514 aa34.42■■■■□ 3.1
SMAD6-202ENST00000557916 DIAPH1O60610 1272 aaKnown RBP34.41■■■■□ 3.1
SMAD6-202ENST00000557916 PDE3BQ13370 1112 aa34.41■■■■□ 3.1
SMAD6-202ENST00000557916 PARP4Q9UKK3 1724 aaKnown RBP34.41■■■■□ 3.1
SMAD6-202ENST00000557916 PRKRIP1Q9H875 184 aaPredicted RBP34.39■■■■□ 3.1
SMAD6-202ENST00000557916 EXOC5O00471 708 aa34.38■■■■□ 3.09
SMAD6-202ENST00000557916 IGSF1Q8N6C5 1336 aa34.38■■■■□ 3.09
SMAD6-202ENST00000557916 NCAPD2Q15021 1401 aa34.38■■■■□ 3.09
SMAD6-202ENST00000557916 RAPGEF4Q8WZA2 1011 aa34.38■■■■□ 3.09
SMAD6-202ENST00000557916 COL3A1P02461 1466 aaPredicted RBP34.37■■■■□ 3.09
SMAD6-202ENST00000557916 LRRC37A3O60309 1634 aa34.36■■■■□ 3.09
SMAD6-202ENST00000557916 MYBBP1AQ9BQG0 1328 aaKnown RBP34.35■■■■□ 3.09
SMAD6-202ENST00000557916 TATP17735 454 aaPredicted RBP34.35■■■■□ 3.09
SMAD6-202ENST00000557916 MEGF6O75095 1541 aa34.34■■■■□ 3.09
SMAD6-202ENST00000557916 FAM182BQ5T319 152 aa34.33■■■■□ 3.09
SMAD6-202ENST00000557916 TNS2Q63HR2 1409 aa34.32■■■■□ 3.08
SMAD6-202ENST00000557916 OVOS2A0A0G2JMS6 1433 aa34.3■■■■□ 3.08
SMAD6-202ENST00000557916 SULT6B1Q6IMI4 303 aa34.3■■■■□ 3.08
SMAD6-202ENST00000557916 RGPD1P0DJD0 1748 aa34.29■■■■□ 3.08
SMAD6-202ENST00000557916 U2SURPO15042 1029 aaKnown RBP34.29■■■■□ 3.08
SMAD6-202ENST00000557916 AEBP1Q8IUX7 1158 aa34.29■■■■□ 3.08
SMAD6-202ENST00000557916 ZCRB1Q8TBF4 217 aaKnown RBP34.29■■■■□ 3.08
SMAD6-202ENST00000557916 MARCH10Q8NA82 808 aaPredicted RBP34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms