RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TAS1R3Q7RTX0 852 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 SIX5Q8N196 739 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 ARMC2Q8NEN0 867 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 GPKOWQ92917 476 aaPredicted RBP eCLIP5.68□□□□□ -1.52e-6■■■□□ 15.9
TDP1-217ENST00000557782 SEC13P55735 322 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 CLDN10P78369 228 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 SF3B2Q13435 895 aaKnown RBP5.67□□□□□ -1.5
TDP1-217ENST00000557782 MORN1Q5T089 497 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 PHTF2Q8N3S3 785 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 ZBED2Q9BTP6 218 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 ANO2Q9NQ90 1003 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 SEPT9Q9UHD8 586 aaPredicted RBP5.67□□□□□ -1.5
TDP1-217ENST00000557782 RABGEF1Q9UJ41 708 aa5.67□□□□□ -1.5
TDP1-217ENST00000557782 CTHP32929 405 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 ITGAEP38570 1179 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 PTPRNQ16849 979 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 FAM98CQ17RN3 349 aaKnown RBP5.66□□□□□ -1.5
TDP1-217ENST00000557782 PDXDC2PQ6P474 469 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 TRAF7Q6Q0C0 670 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 RGL4Q8IZJ4 473 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 PRIMPOLQ96LW4 560 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 USB1Q9BQ65 265 aaKnown RBP5.66□□□□□ -1.5
TDP1-217ENST00000557782 MAP10Q9P2G4 905 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 CHIC2Q9UKJ5 165 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 SLC27A5Q9Y2P5 690 aa5.66□□□□□ -1.5
TDP1-217ENST00000557782 SCAMP3O14828 347 aaKnown RBP5.65□□□□□ -1.5
TDP1-217ENST00000557782 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
TDP1-217ENST00000557782 FKBP4Q02790 459 aaKnown RBP eCLIP5.65□□□□□ -1.5
TDP1-217ENST00000557782 OCLNQ16625 522 aa5.65□□□□□ -1.5
TDP1-217ENST00000557782 NBPF14Q5TI25 921 aa5.65□□□□□ -1.5
TDP1-217ENST00000557782 SAMD7Q7Z3H4 446 aa5.65□□□□□ -1.5
TDP1-217ENST00000557782 DOLKQ9UPQ8 538 aa5.65□□□□□ -1.5
TDP1-217ENST00000557782 ACTN4O43707 911 aaKnown RBP5.64□□□□□ -1.51
TDP1-217ENST00000557782 JUNDP17535 347 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 GTF2IP78347 998 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 FGD1P98174 961 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 MYT1Q01538 1121 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 PUS10Q3MIT2 529 aaKnown RBP5.64□□□□□ -1.51
TDP1-217ENST00000557782 CCDC102BQ68D86 513 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 GTF3C2Q8WUA4 911 aaPredicted RBP5.64□□□□□ -1.51
TDP1-217ENST00000557782 PRR14Q9BWN1 585 aa5.64□□□□□ -1.51
TDP1-217ENST00000557782 PTCD1O75127 700 aaKnown RBP5.63□□□□□ -1.51
TDP1-217ENST00000557782 FMNL1O95466 1100 aaPredicted RBP5.63□□□□□ -1.51
TDP1-217ENST00000557782 PSME1Q06323 249 aa5.63□□□□□ -1.51
TDP1-217ENST00000557782 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
TDP1-217ENST00000557782 RNF19BQ6ZMZ0 732 aa5.63□□□□□ -1.51
TDP1-217ENST00000557782 BACH2Q9BYV9 841 aa5.63□□□□□ -1.51
TDP1-217ENST00000557782 KIAA1024Q9UPX6 916 aa5.63□□□□□ -1.51
TDP1-217ENST00000557782 SALL2Q9Y467 1007 aaPredicted RBP5.63□□□□□ -1.51
TDP1-217ENST00000557782 ZBTB7BO15156 539 aaPredicted RBP5.62□□□□□ -1.51
TDP1-217ENST00000557782 DKK1O94907 266 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
TDP1-217ENST00000557782 ZBTB33Q86T24 672 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 DZIP3Q86Y13 1208 aaKnown RBP5.62□□□□□ -1.51
TDP1-217ENST00000557782 ANKRD13AQ8IZ07 590 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 TPCN2Q8NHX9 752 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 HINFPQ9BQA5 517 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 ARHGAP9Q9BRR9 750 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 SLC4A5Q9BY07 1137 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 DNMT3AQ9Y6K1 912 aaPredicted RBP5.62□□□□□ -1.51
TDP1-217ENST00000557782 CADPSQ9ULU8 1353 aa5.62□□□□□ -1.51
TDP1-217ENST00000557782 SFI1A8K8P3 1242 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 ARHGAP4P98171 946 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 HDLBPQ00341 1268 aaKnown RBP5.61□□□□□ -1.51
TDP1-217ENST00000557782 BLOC1S3Q6QNY0 202 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 LAPTM4BQ86VI4 370 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 ADAM32Q8TC27 787 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 MKNK1Q9BUB5 465 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 SEPT3Q9UH03 358 aa5.61□□□□□ -1.51
TDP1-217ENST00000557782 NDUFB5O43674 189 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 XPCQ01831 940 aaPredicted RBP5.6□□□□□ -1.51
TDP1-217ENST00000557782 RNF20Q5VTR2 975 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 BRICD5Q6PL45 260 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 CHMP4AQ9BY43 222 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 RBCK1Q9BYM8 510 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 TANGO6Q9C0B7 1094 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 NBPF3Q9H094 633 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 MRS2Q9HD23 443 aa5.6□□□□□ -1.51
TDP1-217ENST00000557782 ANKRD62A6NC57 917 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 FAM13AO94988 1023 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
TDP1-217ENST00000557782 MTMR3Q13615 1198 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 ECM1Q16610 540 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 TSGA10IPQ3SY00 556 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 DPH6Q7L8W6 267 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 TMEM87AQ8NBN3 555 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 HELQQ8TDG4 1101 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 COL26A1Q96A83 441 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 CCDC85AQ96PX6 553 aaPredicted RBP5.59□□□□□ -1.51
TDP1-217ENST00000557782 OCSTAMPQ9BR26 566 aa5.59□□□□□ -1.51
TDP1-217ENST00000557782 M0R2N6 131 aa5.58□□□□□ -1.52
TDP1-217ENST00000557782 HOXB1P14653 301 aaPredicted RBP5.58□□□□□ -1.52
TDP1-217ENST00000557782 WEE1P30291 646 aa5.58□□□□□ -1.52
TDP1-217ENST00000557782 PSEN2P49810 448 aa5.58□□□□□ -1.52
TDP1-217ENST00000557782 NUDT12Q9BQG2 462 aa5.58□□□□□ -1.52
TDP1-217ENST00000557782 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
TDP1-217ENST00000557782 EIF5BO60841 1220 aaKnown RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 NR1I2O75469 434 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms