RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
PABPN1-208ENST00000557702 COL5A2P05997 1499 aaPredicted RBP14.07□□□□□ -0.16
PABPN1-208ENST00000557702 GCP02774 474 aa14.07□□□□□ -0.16
PABPN1-208ENST00000557702 TOM1L2Q6ZVM7 507 aa14.07□□□□□ -0.16
PABPN1-208ENST00000557702 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
PABPN1-208ENST00000557702 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
PABPN1-208ENST00000557702 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
PABPN1-208ENST00000557702 LMO7Q8WWI1 1683 aa14.06□□□□□ -0.16
PABPN1-208ENST00000557702 NLRP13Q86W25 1043 aa14.05□□□□□ -0.16
PABPN1-208ENST00000557702 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
PABPN1-208ENST00000557702 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
PABPN1-208ENST00000557702 USP19O94966 1318 aa14.04□□□□□ -0.16
PABPN1-208ENST00000557702 LRRC37A3O60309 1634 aa14.04□□□□□ -0.16
PABPN1-208ENST00000557702 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
PABPN1-208ENST00000557702 CAPN15O75808 1086 aa14.03□□□□□ -0.16
PABPN1-208ENST00000557702 APLP1P51693 650 aa14.03□□□□□ -0.16
PABPN1-208ENST00000557702 ACEP12821 1306 aa14.02□□□□□ -0.17
PABPN1-208ENST00000557702 EXOC5O00471 708 aa14.02□□□□□ -0.17
PABPN1-208ENST00000557702 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.17
PABPN1-208ENST00000557702 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
PABPN1-208ENST00000557702 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
PABPN1-208ENST00000557702 COL13A1Q5TAT6 717 aaPredicted RBP13.99□□□□□ -0.17
PABPN1-208ENST00000557702 DNAJC5GQ8N7S2 189 aa13.99□□□□□ -0.17
PABPN1-208ENST00000557702 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
PABPN1-208ENST00000557702 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
PABPN1-208ENST00000557702 PLEKHG3A1L390 1219 aa13.98□□□□□ -0.17
PABPN1-208ENST00000557702 PRELPP51888 382 aa13.98□□□□□ -0.17
PABPN1-208ENST00000557702 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
PABPN1-208ENST00000557702 CDK19Q9BWU1 502 aa13.98□□□□□ -0.17
PABPN1-208ENST00000557702 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
PABPN1-208ENST00000557702 MPHOSPH9Q99550 1183 aa13.97□□□□□ -0.17
PABPN1-208ENST00000557702 ITSN1Q15811 1721 aa13.97□□□□□ -0.17
PABPN1-208ENST00000557702 ADCY9O60503 1353 aa13.96□□□□□ -0.17
PABPN1-208ENST00000557702 AKAP12Q02952 1782 aa13.96□□□□□ -0.17
PABPN1-208ENST00000557702 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
PABPN1-208ENST00000557702 LRRC4BQ9NT99 713 aa13.96□□□□□ -0.17
PABPN1-208ENST00000557702 ADGRB1O14514 1584 aa13.96□□□□□ -0.18
PABPN1-208ENST00000557702 PNPLA7Q6ZV29 1317 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 PAPPAQ13219 1627 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 KIF3CO14782 793 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 CSB-PGBD3P0DP91 1061 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
PABPN1-208ENST00000557702 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
PABPN1-208ENST00000557702 BRD4O60885 1362 aaPredicted RBP13.95□□□□□ -0.18
PABPN1-208ENST00000557702 NLRP6P59044 892 aa13.94□□□□□ -0.18
PABPN1-208ENST00000557702 TOPAZ1Q8N9V7 1692 aa13.94□□□□□ -0.18
PABPN1-208ENST00000557702 USP6P35125 1406 aa13.93□□□□□ -0.18
PABPN1-208ENST00000557702 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
PABPN1-208ENST00000557702 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
PABPN1-208ENST00000557702 TOMM70O94826 608 aa13.9□□□□□ -0.18
PABPN1-208ENST00000557702 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
PABPN1-208ENST00000557702 TNS2Q63HR2 1409 aa13.9□□□□□ -0.19
PABPN1-208ENST00000557702 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
PABPN1-208ENST00000557702 CCDC7Q96M83 1385 aa13.89□□□□□ -0.19
PABPN1-208ENST00000557702 SLC34A2O95436 690 aa13.89□□□□□ -0.19
PABPN1-208ENST00000557702 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
PABPN1-208ENST00000557702 WNK3Q9BYP7 1800 aa13.89□□□□□ -0.19
PABPN1-208ENST00000557702 MSH5O43196 834 aa13.88□□□□□ -0.19
PABPN1-208ENST00000557702 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
PABPN1-208ENST00000557702 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
PABPN1-208ENST00000557702 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
PABPN1-208ENST00000557702 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
PABPN1-208ENST00000557702 CPSF1Q10570 1443 aaKnown RBP13.86□□□□□ -0.19
PABPN1-208ENST00000557702 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
PABPN1-208ENST00000557702 COL18A1P39060 1754 aa13.86□□□□□ -0.19
PABPN1-208ENST00000557702 SLIT3O75094 1523 aa13.85□□□□□ -0.19
PABPN1-208ENST00000557702 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
PABPN1-208ENST00000557702 KCNQ4P56696 695 aa13.85□□□□□ -0.19
PABPN1-208ENST00000557702 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
PABPN1-208ENST00000557702 BTAF1O14981 1849 aa13.85□□□□□ -0.19
PABPN1-208ENST00000557702 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
PABPN1-208ENST00000557702 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
PABPN1-208ENST00000557702 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
PABPN1-208ENST00000557702 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
PABPN1-208ENST00000557702 SOX12O15370 315 aa13.83□□□□□ -0.2
PABPN1-208ENST00000557702 IL2RBP14784 551 aa13.83□□□□□ -0.2
PABPN1-208ENST00000557702 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
PABPN1-208ENST00000557702 STAC3Q96MF2 364 aa13.83□□□□□ -0.2
PABPN1-208ENST00000557702 ABCC6O95255 1503 aa13.82□□□□□ -0.2
PABPN1-208ENST00000557702 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
PABPN1-208ENST00000557702 HTRA3P83110 453 aa13.81□□□□□ -0.2
PABPN1-208ENST00000557702 NLRP2Q9NX02 1062 aa13.81□□□□□ -0.2
PABPN1-208ENST00000557702 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
PABPN1-208ENST00000557702 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
PABPN1-208ENST00000557702 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
PABPN1-208ENST00000557702 PCNTO95613 3336 aa13.79□□□□□ -0.2
PABPN1-208ENST00000557702 RBM46Q8TBY0 533 aaKnown RBP13.79□□□□□ -0.2
PABPN1-208ENST00000557702 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
PABPN1-208ENST00000557702 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
PABPN1-208ENST00000557702 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
PABPN1-208ENST00000557702 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
PABPN1-208ENST00000557702 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
PABPN1-208ENST00000557702 CCNL1Q9UK58 526 aaPredicted RBP13.78□□□□□ -0.2
PABPN1-208ENST00000557702 TUBGCP6Q96RT7 1819 aa13.78□□□□□ -0.2
PABPN1-208ENST00000557702 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
PABPN1-208ENST00000557702 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
PABPN1-208ENST00000557702 WDR90Q96KV7 1748 aa13.76□□□□□ -0.21
PABPN1-208ENST00000557702 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms