RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 KTN1Q86UP2 1357 aaKnown RBP32.77■■■□□ 2.84
RIPK3-207ENST00000557662 PARD3Q8TEW0 1356 aa32.77■■■□□ 2.84
RIPK3-207ENST00000557662 CARD11Q9BXL7 1154 aa32.76■■■□□ 2.83
RIPK3-207ENST00000557662 LTN1O94822 1766 aa32.75■■■□□ 2.83
RIPK3-207ENST00000557662 PDE3BQ13370 1112 aa32.75■■■□□ 2.83
RIPK3-207ENST00000557662 USP31Q70CQ4 1352 aa32.74■■■□□ 2.83
RIPK3-207ENST00000557662 TONSLQ96HA7 1378 aa32.74■■■□□ 2.83
RIPK3-207ENST00000557662 EZH2Q15910 746 aaKnown RBP32.74■■■□□ 2.83
RIPK3-207ENST00000557662 WDR17Q8IZU2 1322 aa32.74■■■□□ 2.83
RIPK3-207ENST00000557662 KCNH5Q8NCM2 988 aa32.73■■■□□ 2.83
RIPK3-207ENST00000557662 PSDA5PKW4 1024 aaPredicted RBP32.72■■■□□ 2.83
RIPK3-207ENST00000557662 OVOS2A0A0G2JMS6 1433 aa32.69■■■□□ 2.82
RIPK3-207ENST00000557662 OVOS2A0A0J9YW53 1432 aa32.69■■■□□ 2.82
RIPK3-207ENST00000557662 OVOS2Q6IE36 1432 aa32.69■■■□□ 2.82
RIPK3-207ENST00000557662 PUS7Q96PZ0 661 aaKnown RBP32.67■■■□□ 2.82
RIPK3-207ENST00000557662 ZBTB7CA1YPR0 619 aa32.66■■■□□ 2.82
RIPK3-207ENST00000557662 APBA3O96018 575 aa32.66■■■□□ 2.82
RIPK3-207ENST00000557662 BCL9O00512 1426 aa32.66■■■□□ 2.82
RIPK3-207ENST00000557662 EDC4Q6P2E9 1401 aaKnown RBP32.65■■■□□ 2.82
RIPK3-207ENST00000557662 C11orf95C9JLR9 678 aaPredicted RBP32.64■■■□□ 2.82
RIPK3-207ENST00000557662 TOM1L2Q6ZVM7 507 aa32.64■■■□□ 2.82
RIPK3-207ENST00000557662 TESK2Q96S53 571 aa32.63■■■□□ 2.81
RIPK3-207ENST00000557662 R3HDM1Q15032 1099 aaKnown RBP32.62■■■□□ 2.81
RIPK3-207ENST00000557662 CARD10Q9BWT7 1032 aa32.62■■■□□ 2.81
RIPK3-207ENST00000557662 A0A1W2PP64 1363 aa32.61■■■□□ 2.81
RIPK3-207ENST00000557662 SLC12A5Q9H2X9 1139 aa32.6■■■□□ 2.81
RIPK3-207ENST00000557662 DDB1Q16531 1140 aa32.59■■■□□ 2.81
RIPK3-207ENST00000557662 CDCA7Q9BWT1 371 aaPredicted RBP32.59■■■□□ 2.81
RIPK3-207ENST00000557662 NME9Q86XW9 330 aa32.58■■■□□ 2.81
RIPK3-207ENST00000557662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.58■■■□□ 2.81
RIPK3-207ENST00000557662 SOX12O15370 315 aa32.57■■■□□ 2.8
RIPK3-207ENST00000557662 CCDC7Q96M83 1385 aa32.56■■■□□ 2.8
RIPK3-207ENST00000557662 NINLQ9Y2I6 1382 aa32.56■■■□□ 2.8
RIPK3-207ENST00000557662 TRIM26Q12899 539 aaPredicted RBP32.55■■■□□ 2.8
RIPK3-207ENST00000557662 MARCH10Q8NA82 808 aaPredicted RBP32.54■■■□□ 2.8
RIPK3-207ENST00000557662 ERBB3P21860 1342 aa32.53■■■□□ 2.8
RIPK3-207ENST00000557662 TNS2Q63HR2 1409 aa32.53■■■□□ 2.8
RIPK3-207ENST00000557662 HDGFL2Q7Z4V5 671 aaPredicted RBP32.53■■■□□ 2.8
RIPK3-207ENST00000557662 TMC1Q8TDI8 760 aa32.53■■■□□ 2.8
RIPK3-207ENST00000557662 FAM208AQ9UK61 1670 aaKnown RBP32.53■■■□□ 2.8
RIPK3-207ENST00000557662 ST20-MTHFSA0A0A6YYL1 179 aa32.51■■■□□ 2.79
RIPK3-207ENST00000557662 TERF2IPQ9NYB0 399 aa32.51■■■□□ 2.79
RIPK3-207ENST00000557662 NHSQ6T4R5 1651 aa32.5■■■□□ 2.79
RIPK3-207ENST00000557662 PLSCR1O15162 318 aa32.5■■■□□ 2.79
RIPK3-207ENST00000557662 PTF1AQ7RTS3 328 aa32.49■■■□□ 2.79
RIPK3-207ENST00000557662 CSB-PGBD3P0DP91 1061 aa32.48■■■□□ 2.79
RIPK3-207ENST00000557662 BCL11BQ9C0K0 894 aaPredicted RBP32.48■■■□□ 2.79
RIPK3-207ENST00000557662 CASZ1Q86V15 1759 aa32.47■■■□□ 2.79
RIPK3-207ENST00000557662 SLC24A1O60721 1099 aa32.42■■■□□ 2.78
RIPK3-207ENST00000557662 RGPD2P0DJD1 1756 aa32.42■■■□□ 2.78
RIPK3-207ENST00000557662 EXOC5O00471 708 aa32.4■■■□□ 2.78
RIPK3-207ENST00000557662 NBPF14Q5TI25 921 aa32.4■■■□□ 2.78
RIPK3-207ENST00000557662 ANKRD36BQ8N2N9 1353 aa32.4■■■□□ 2.78
RIPK3-207ENST00000557662 PROM2Q8N271 834 aa32.39■■■□□ 2.78
RIPK3-207ENST00000557662 USP47Q96K76 1375 aa32.39■■■□□ 2.78
RIPK3-207ENST00000557662 MYOM1P52179 1685 aa32.39■■■□□ 2.78
RIPK3-207ENST00000557662 BTAF1O14981 1849 aa32.39■■■□□ 2.78
RIPK3-207ENST00000557662 SHANK3Q9BYB0 1731 aa32.37■■■□□ 2.77
RIPK3-207ENST00000557662 ANKRD24Q8TF21 1146 aa32.37■■■□□ 2.77
RIPK3-207ENST00000557662 KIF20BQ96Q89 1820 aa32.37■■■□□ 2.77
RIPK3-207ENST00000557662 IP6K1Q92551 441 aa32.36■■■□□ 2.77
RIPK3-207ENST00000557662 ANO8Q9HCE9 1232 aaPredicted RBP32.36■■■□□ 2.77
RIPK3-207ENST00000557662 KAT6BQ8WYB5 2073 aa32.35■■■□□ 2.77
RIPK3-207ENST00000557662 NLRP2Q9NX02 1062 aa32.34■■■□□ 2.77
RIPK3-207ENST00000557662 PAPPAQ13219 1627 aa32.33■■■□□ 2.77
RIPK3-207ENST00000557662 IL2RBP14784 551 aa32.33■■■□□ 2.77
RIPK3-207ENST00000557662 MAP3K19Q56UN5 1328 aa32.3■■■□□ 2.76
RIPK3-207ENST00000557662 KCNQ2O43526 872 aa32.29■■■□□ 2.76
RIPK3-207ENST00000557662 COG3Q96JB2 828 aa32.28■■■□□ 2.76
RIPK3-207ENST00000557662 TMF1P82094 1093 aa32.27■■■□□ 2.76
RIPK3-207ENST00000557662 TXNRD1Q16881 649 aa32.26■■■□□ 2.75
RIPK3-207ENST00000557662 RTL1A6NKG5 1358 aa32.26■■■□□ 2.75
RIPK3-207ENST00000557662 HOXC9P31274 260 aa32.25■■■□□ 2.75
RIPK3-207ENST00000557662 FYB1O15117 783 aa32.24■■■□□ 2.75
RIPK3-207ENST00000557662 FBLN1P23142 703 aa32.24■■■□□ 2.75
RIPK3-207ENST00000557662 DOT1LQ8TEK3 1739 aa32.23■■■□□ 2.75
RIPK3-207ENST00000557662 TIMELESSQ9UNS1 1208 aa32.23■■■□□ 2.75
RIPK3-207ENST00000557662 SPON1Q9HCB6 807 aa32.22■■■□□ 2.75
RIPK3-207ENST00000557662 CLSPNQ9HAW4 1339 aa32.22■■■□□ 2.75
RIPK3-207ENST00000557662 ANKRD26Q9UPS8 1709 aa32.21■■■□□ 2.75
RIPK3-207ENST00000557662 QSER1Q2KHR3 1735 aa32.2■■■□□ 2.75
RIPK3-207ENST00000557662 PDGFDQ9GZP0 370 aaPredicted RBP32.2■■■□□ 2.75
RIPK3-207ENST00000557662 ACSBG1Q96GR2 724 aa32.19■■■□□ 2.74
RIPK3-207ENST00000557662 LY75O60449 1722 aa32.19■■■□□ 2.74
RIPK3-207ENST00000557662 MEGF6O75095 1541 aa32.19■■■□□ 2.74
RIPK3-207ENST00000557662 LTV1Q96GA3 475 aaPredicted RBP32.15■■■□□ 2.74
RIPK3-207ENST00000557662 GGNBP2Q9H3C7 697 aa32.15■■■□□ 2.74
RIPK3-207ENST00000557662 AMPHP49418 695 aa32.14■■■□□ 2.74
RIPK3-207ENST00000557662 SLC15A2Q16348 729 aa32.14■■■□□ 2.74
RIPK3-207ENST00000557662 CDCA8Q53HL2 280 aa32.14■■■□□ 2.74
RIPK3-207ENST00000557662 TUBGCP6Q96RT7 1819 aa32.14■■■□□ 2.74
RIPK3-207ENST00000557662 RRS1Q15050 365 aaKnown RBP32.13■■■□□ 2.73
RIPK3-207ENST00000557662 COL24A1Q17RW2 1714 aa32.12■■■□□ 2.73
RIPK3-207ENST00000557662 KIF24Q5T7B8 1368 aa32.12■■■□□ 2.73
RIPK3-207ENST00000557662 CARD14Q9BXL6 1004 aa32.12■■■□□ 2.73
RIPK3-207ENST00000557662 NSD2O96028 1365 aa32.1■■■□□ 2.73
RIPK3-207ENST00000557662 PTGER2P43116 358 aa32.1■■■□□ 2.73
RIPK3-207ENST00000557662 STK32BQ9NY57 414 aa32.1■■■□□ 2.73
RIPK3-207ENST00000557662 MAP2P11137 1827 aaKnown RBP32.1■■■□□ 2.73
RIPK3-207ENST00000557662 INSRP06213 1382 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms