RNA–Protein interactions for RNA: ENST00000557632.1

PSMC6-217, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-217ENST00000557632 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
PSMC6-217ENST00000557632 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
PSMC6-217ENST00000557632 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
PSMC6-217ENST00000557632 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
PSMC6-217ENST00000557632 CD2BP2O95400 341 aaKnown RBP9.91□□□□□ -0.82
PSMC6-217ENST00000557632 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
PSMC6-217ENST00000557632 NBPF20Q3BBV1 942 aa9.91□□□□□ -0.82
PSMC6-217ENST00000557632 Q6ZNB5 142 aa9.91□□□□□ -0.82
PSMC6-217ENST00000557632 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
PSMC6-217ENST00000557632 PLPP7Q8NBV4 271 aa9.91□□□□□ -0.82
PSMC6-217ENST00000557632 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
PSMC6-217ENST00000557632 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
PSMC6-217ENST00000557632 VRTNQ9H8Y1 702 aa9.9□□□□□ -0.82
PSMC6-217ENST00000557632 MAP7D1Q3KQU3 841 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
PSMC6-217ENST00000557632 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
PSMC6-217ENST00000557632 NCOA4Q13772 614 aa9.88□□□□□ -0.83
PSMC6-217ENST00000557632 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
PSMC6-217ENST00000557632 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
PSMC6-217ENST00000557632 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
PSMC6-217ENST00000557632 ESPNB1AK53 854 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 ATG7O95352 703 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 EML3Q32P44 896 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 SEPT12Q8IYM1 358 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
PSMC6-217ENST00000557632 CCDC85AQ96PX6 553 aaPredicted RBP9.86□□□□□ -0.83
PSMC6-217ENST00000557632 KCTD15Q96SI1 283 aaPredicted RBP9.86□□□□□ -0.83
PSMC6-217ENST00000557632 MKRN1Q9UHC7 482 aaKnown RBP9.86□□□□□ -0.83
PSMC6-217ENST00000557632 MAP4K5Q9Y4K4 846 aa9.86□□□□□ -0.83
PSMC6-217ENST00000557632 SLC19A1P41440 591 aa9.85□□□□□ -0.83
PSMC6-217ENST00000557632 PDE4CQ08493 712 aa9.85□□□□□ -0.83
PSMC6-217ENST00000557632 TSGA10IPQ3SY00 556 aa9.85□□□□□ -0.83
PSMC6-217ENST00000557632 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
PSMC6-217ENST00000557632 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
PSMC6-217ENST00000557632 ATP5J2-PTCD1G3V325 749 aa9.84□□□□□ -0.83
PSMC6-217ENST00000557632 CCDC125Q86Z20 511 aa9.84□□□□□ -0.83
PSMC6-217ENST00000557632 ARID5BQ14865 1188 aa9.83□□□□□ -0.84
PSMC6-217ENST00000557632 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
PSMC6-217ENST00000557632 RAB15P59190 212 aa9.82□□□□□ -0.84
PSMC6-217ENST00000557632 NOD1Q9Y239 953 aa9.82□□□□□ -0.84
PSMC6-217ENST00000557632 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
PSMC6-217ENST00000557632 PCDHB11Q9Y5F2 797 aa9.82□□□□□ -0.84
PSMC6-217ENST00000557632 FAM196BA6NMK8 535 aa9.81□□□□□ -0.84
PSMC6-217ENST00000557632 RASA1P20936 1047 aa9.81□□□□□ -0.84
PSMC6-217ENST00000557632 ELOAQ14241 798 aaKnown RBP9.81□□□□□ -0.84
PSMC6-217ENST00000557632 LARP1Q6PKG0 1096 aaKnown RBP9.81□□□□□ -0.84
PSMC6-217ENST00000557632 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L15C9J2P7 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L10C9JJH3 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L13C9JLJ4 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L11C9JVI0 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L21D6R901 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L18D6R9N7 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L22D6RA61 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L17D6RBQ6 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L19D6RCP7 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L20D6RJB6 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 WNT7AO00755 349 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 USP17L24Q0WX57 530 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 INTS6LQ5JSJ4 861 aaKnown RBP9.8□□□□□ -0.84
PSMC6-217ENST00000557632 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 TRIM50Q86XT4 487 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 MPNDQ8N594 471 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
PSMC6-217ENST00000557632 TLL2Q9Y6L7 1015 aa9.8□□□□□ -0.84
PSMC6-217ENST00000557632 SIAH2O43255 324 aa9.79□□□□□ -0.84
PSMC6-217ENST00000557632 FSHRP23945 695 aa9.79□□□□□ -0.84
PSMC6-217ENST00000557632 CRTC2Q53ET0 693 aaPredicted RBP9.79□□□□□ -0.84
PSMC6-217ENST00000557632 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
PSMC6-217ENST00000557632 NOVA2Q9UNW9 492 aaKnown RBP9.79□□□□□ -0.84
PSMC6-217ENST00000557632 ATP1A2P50993 1020 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 USP4Q13107 963 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 PTK7Q13308 1070 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
PSMC6-217ENST00000557632 ERVH48-1M5A8F1 160 aa9.77□□□□□ -0.85
PSMC6-217ENST00000557632 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
PSMC6-217ENST00000557632 ZNF598Q86UK7 904 aaKnown RBP9.77□□□□□ -0.85
PSMC6-217ENST00000557632 ADH1CP00326 375 aa9.76□□□□□ -0.85
PSMC6-217ENST00000557632 GRM5P41594 1212 aa9.76□□□□□ -0.85
PSMC6-217ENST00000557632 GTF2IP78347 998 aa9.76□□□□□ -0.85
PSMC6-217ENST00000557632 CLDN10P78369 228 aa9.76□□□□□ -0.85
PSMC6-217ENST00000557632 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
PSMC6-217ENST00000557632 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
PSMC6-217ENST00000557632 CARNS1A5YM72 827 aa9.75□□□□□ -0.85
PSMC6-217ENST00000557632 TMEM88BA6NKF7 163 aa9.75□□□□□ -0.85
PSMC6-217ENST00000557632 MYCP01106 439 aaPredicted RBP9.75□□□□□ -0.85
PSMC6-217ENST00000557632 TRIM26Q12899 539 aaPredicted RBP9.75□□□□□ -0.85
PSMC6-217ENST00000557632 TMEM164Q5U3C3 297 aa9.75□□□□□ -0.85
PSMC6-217ENST00000557632 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
PSMC6-217ENST00000557632 STK32AQ8WU08 396 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms