RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
PSMC6-215ENST00000557517 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
PSMC6-215ENST00000557517 CPSF1Q10570 1443 aaKnown RBP15.03■□□□□ -0
PSMC6-215ENST00000557517 BARGINQ6ZT62 677 aa15.03■□□□□ -0
PSMC6-215ENST00000557517 STRN4Q9NRL3 753 aa15.03■□□□□ -0
PSMC6-215ENST00000557517 COL14A1Q05707 1796 aaKnown RBP15.03■□□□□ -0
PSMC6-215ENST00000557517 TTC21BQ7Z4L5 1316 aa15.02■□□□□ -0
PSMC6-215ENST00000557517 ITSN1Q15811 1721 aa15.02□□□□□ -0.01
PSMC6-215ENST00000557517 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
PSMC6-215ENST00000557517 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
PSMC6-215ENST00000557517 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
PSMC6-215ENST00000557517 HAX1O00165 279 aa15□□□□□ -0.01
PSMC6-215ENST00000557517 SLC24A1O60721 1099 aa15□□□□□ -0.01
PSMC6-215ENST00000557517 R3HDM1Q15032 1099 aaKnown RBP15□□□□□ -0.01
PSMC6-215ENST00000557517 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
PSMC6-215ENST00000557517 CRYBG1Q9Y4K1 1723 aa15□□□□□ -0.01
PSMC6-215ENST00000557517 CAMTA1Q9Y6Y1 1673 aa15□□□□□ -0.01
PSMC6-215ENST00000557517 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
PSMC6-215ENST00000557517 ARHGEF25Q86VW2 580 aa14.99□□□□□ -0.01
PSMC6-215ENST00000557517 TCP11L2Q8N4U5 519 aa14.99□□□□□ -0.01
PSMC6-215ENST00000557517 KCNH5Q8NCM2 988 aa14.99□□□□□ -0.01
PSMC6-215ENST00000557517 TESK2Q96S53 571 aa14.99□□□□□ -0.01
PSMC6-215ENST00000557517 SLC12A5Q9H2X9 1139 aa14.98□□□□□ -0.01
PSMC6-215ENST00000557517 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
PSMC6-215ENST00000557517 TIMELESSQ9UNS1 1208 aa14.98□□□□□ -0.01
PSMC6-215ENST00000557517 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
PSMC6-215ENST00000557517 ST20-MTHFSA0A0A6YYL1 179 aa14.97□□□□□ -0.01
PSMC6-215ENST00000557517 FAM182BQ5T319 152 aa14.97□□□□□ -0.01
PSMC6-215ENST00000557517 AXIN2Q9Y2T1 843 aa14.97□□□□□ -0.01
PSMC6-215ENST00000557517 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
PSMC6-215ENST00000557517 FAM196AQ6ZSG2 479 aa14.96□□□□□ -0.01
PSMC6-215ENST00000557517 RREB1Q92766 1687 aa14.96□□□□□ -0.01
PSMC6-215ENST00000557517 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
PSMC6-215ENST00000557517 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
PSMC6-215ENST00000557517 USP31Q70CQ4 1352 aa14.95□□□□□ -0.02
PSMC6-215ENST00000557517 PARD3Q8TEW0 1356 aa14.95□□□□□ -0.02
PSMC6-215ENST00000557517 NRKQ7Z2Y5 1582 aa14.94□□□□□ -0.02
PSMC6-215ENST00000557517 SLIT3O75094 1523 aa14.94□□□□□ -0.02
PSMC6-215ENST00000557517 PDE3BQ13370 1112 aa14.94□□□□□ -0.02
PSMC6-215ENST00000557517 EZH2Q15910 746 aaKnown RBP14.94□□□□□ -0.02
PSMC6-215ENST00000557517 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
PSMC6-215ENST00000557517 PHRF1Q9P1Y6 1649 aaKnown RBP14.94□□□□□ -0.02
PSMC6-215ENST00000557517 CD163L1Q9NR16 1453 aa14.94□□□□□ -0.02
PSMC6-215ENST00000557517 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
PSMC6-215ENST00000557517 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
PSMC6-215ENST00000557517 COL5A2P05997 1499 aaPredicted RBP14.93□□□□□ -0.02
PSMC6-215ENST00000557517 CRB1P82279 1406 aa14.92□□□□□ -0.02
PSMC6-215ENST00000557517 NUP188Q5SRE5 1749 aa14.92□□□□□ -0.02
PSMC6-215ENST00000557517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
PSMC6-215ENST00000557517 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
PSMC6-215ENST00000557517 LMO7Q8WWI1 1683 aa14.91□□□□□ -0.02
PSMC6-215ENST00000557517 C11orf95C9JLR9 678 aaPredicted RBP14.91□□□□□ -0.02
PSMC6-215ENST00000557517 YY1P25490 414 aa14.91□□□□□ -0.02
PSMC6-215ENST00000557517 TOM1L2Q6ZVM7 507 aa14.91□□□□□ -0.02
PSMC6-215ENST00000557517 NME9Q86XW9 330 aa14.91□□□□□ -0.02
PSMC6-215ENST00000557517 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
PSMC6-215ENST00000557517 WDR17Q8IZU2 1322 aa14.91□□□□□ -0.02
PSMC6-215ENST00000557517 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
PSMC6-215ENST00000557517 TRIM37O94972 964 aa14.9□□□□□ -0.02
PSMC6-215ENST00000557517 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
PSMC6-215ENST00000557517 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
PSMC6-215ENST00000557517 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
PSMC6-215ENST00000557517 NINLQ9Y2I6 1382 aa14.88□□□□□ -0.03
PSMC6-215ENST00000557517 SOX12O15370 315 aa14.88□□□□□ -0.03
PSMC6-215ENST00000557517 A0A1W2PP64 1363 aa14.87□□□□□ -0.03
PSMC6-215ENST00000557517 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
PSMC6-215ENST00000557517 PIK3C2AO00443 1686 aa14.87□□□□□ -0.03
PSMC6-215ENST00000557517 APBA3O96018 575 aa14.86□□□□□ -0.03
PSMC6-215ENST00000557517 TMF1P82094 1093 aa14.86□□□□□ -0.03
PSMC6-215ENST00000557517 DDB1Q16531 1140 aa14.86□□□□□ -0.03
PSMC6-215ENST00000557517 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
PSMC6-215ENST00000557517 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
PSMC6-215ENST00000557517 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
PSMC6-215ENST00000557517 USP47Q96K76 1375 aa14.84□□□□□ -0.03
PSMC6-215ENST00000557517 NFAT5O94916 1531 aa14.83□□□□□ -0.04
PSMC6-215ENST00000557517 CDCA8Q53HL2 280 aa14.83□□□□□ -0.04
PSMC6-215ENST00000557517 MARCH10Q8NA82 808 aaPredicted RBP14.83□□□□□ -0.04
PSMC6-215ENST00000557517 ERBB3P21860 1342 aa14.83□□□□□ -0.04
PSMC6-215ENST00000557517 EXOC5O00471 708 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 IP6K1Q92551 441 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 SPON1Q9HCB6 807 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
PSMC6-215ENST00000557517 COL18A1P39060 1754 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 CCDC7Q96M83 1385 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 BCL9O00512 1426 aa14.82□□□□□ -0.04
PSMC6-215ENST00000557517 FYB1O15117 783 aa14.81□□□□□ -0.04
PSMC6-215ENST00000557517 PLSCR1O15162 318 aa14.81□□□□□ -0.04
PSMC6-215ENST00000557517 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
PSMC6-215ENST00000557517 ANKRD36BQ8N2N9 1353 aa14.81□□□□□ -0.04
PSMC6-215ENST00000557517 OVOS2A0A0J9YW53 1432 aa14.81□□□□□ -0.04
PSMC6-215ENST00000557517 OVOS2Q6IE36 1432 aa14.81□□□□□ -0.04
PSMC6-215ENST00000557517 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
PSMC6-215ENST00000557517 KCNQ2O43526 872 aa14.8□□□□□ -0.04
PSMC6-215ENST00000557517 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
PSMC6-215ENST00000557517 COG3Q96JB2 828 aa14.8□□□□□ -0.04
PSMC6-215ENST00000557517 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
PSMC6-215ENST00000557517 ABCC6O95255 1503 aa14.79□□□□□ -0.04
PSMC6-215ENST00000557517 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms