RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 LRP5O75197 1615 aa13.04□□□□□ -0.32
NPC2-209ENST00000557510 BAG6P46379 1132 aa13.04□□□□□ -0.32
NPC2-209ENST00000557510 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
NPC2-209ENST00000557510 CPDO75976 1380 aa13.04□□□□□ -0.32
NPC2-209ENST00000557510 USP6P35125 1406 aa13.04□□□□□ -0.32
NPC2-209ENST00000557510 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
NPC2-209ENST00000557510 COL18A1P39060 1754 aa13.02□□□□□ -0.32
NPC2-209ENST00000557510 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
NPC2-209ENST00000557510 GCP02774 474 aa13.02□□□□□ -0.33
NPC2-209ENST00000557510 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
NPC2-209ENST00000557510 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
NPC2-209ENST00000557510 COL5A2P05997 1499 aaPredicted RBP13.02□□□□□ -0.33
NPC2-209ENST00000557510 SLIT3O75094 1523 aa13.02□□□□□ -0.33
NPC2-209ENST00000557510 RGPD5Q99666 1765 aa13.02□□□□□ -0.33
NPC2-209ENST00000557510 TRIM37O94972 964 aa13.01□□□□□ -0.33
NPC2-209ENST00000557510 EVA1CP58658 441 aa13.01□□□□□ -0.33
NPC2-209ENST00000557510 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
NPC2-209ENST00000557510 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
NPC2-209ENST00000557510 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
NPC2-209ENST00000557510 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
NPC2-209ENST00000557510 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
NPC2-209ENST00000557510 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 NLRP6P59044 892 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 RREB1Q92766 1687 aa12.99□□□□□ -0.33
NPC2-209ENST00000557510 EVC2Q86UK5 1308 aa12.98□□□□□ -0.33
NPC2-209ENST00000557510 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
NPC2-209ENST00000557510 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
NPC2-209ENST00000557510 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
NPC2-209ENST00000557510 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
NPC2-209ENST00000557510 LRRC37A3O60309 1634 aa12.98□□□□□ -0.33
NPC2-209ENST00000557510 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
NPC2-209ENST00000557510 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
NPC2-209ENST00000557510 CRB1P82279 1406 aa12.96□□□□□ -0.33
NPC2-209ENST00000557510 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
NPC2-209ENST00000557510 APBA3O96018 575 aa12.96□□□□□ -0.33
NPC2-209ENST00000557510 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
NPC2-209ENST00000557510 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
NPC2-209ENST00000557510 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
NPC2-209ENST00000557510 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
NPC2-209ENST00000557510 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
NPC2-209ENST00000557510 NFAT5O94916 1531 aa12.94□□□□□ -0.34
NPC2-209ENST00000557510 SOX12O15370 315 aa12.94□□□□□ -0.34
NPC2-209ENST00000557510 THRAP3Q9Y2W1 955 aaKnown RBP12.93□□□□□ -0.34
NPC2-209ENST00000557510 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
NPC2-209ENST00000557510 PTF1AQ7RTS3 328 aa12.92□□□□□ -0.34
NPC2-209ENST00000557510 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
NPC2-209ENST00000557510 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
NPC2-209ENST00000557510 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
NPC2-209ENST00000557510 LTN1O94822 1766 aa12.91□□□□□ -0.34
NPC2-209ENST00000557510 KTN1Q86UP2 1357 aaKnown RBP12.91□□□□□ -0.34
NPC2-209ENST00000557510 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
NPC2-209ENST00000557510 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
NPC2-209ENST00000557510 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
NPC2-209ENST00000557510 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
NPC2-209ENST00000557510 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
NPC2-209ENST00000557510 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
NPC2-209ENST00000557510 TTC21AQ8NDW8 1320 aa12.89□□□□□ -0.35
NPC2-209ENST00000557510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
NPC2-209ENST00000557510 DDB1Q16531 1140 aa12.88□□□□□ -0.35
NPC2-209ENST00000557510 NME9Q86XW9 330 aa12.88□□□□□ -0.35
NPC2-209ENST00000557510 MARCH10Q8NA82 808 aaPredicted RBP12.88□□□□□ -0.35
NPC2-209ENST00000557510 CARD11Q9BXL7 1154 aa12.88□□□□□ -0.35
NPC2-209ENST00000557510 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
NPC2-209ENST00000557510 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
NPC2-209ENST00000557510 KCNH5Q8NCM2 988 aa12.87□□□□□ -0.35
NPC2-209ENST00000557510 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
NPC2-209ENST00000557510 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
NPC2-209ENST00000557510 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
NPC2-209ENST00000557510 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
NPC2-209ENST00000557510 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
NPC2-209ENST00000557510 ABCC6O95255 1503 aa12.85□□□□□ -0.35
NPC2-209ENST00000557510 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
NPC2-209ENST00000557510 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
NPC2-209ENST00000557510 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
NPC2-209ENST00000557510 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
NPC2-209ENST00000557510 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
NPC2-209ENST00000557510 BCL9O00512 1426 aa12.83□□□□□ -0.36
NPC2-209ENST00000557510 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
NPC2-209ENST00000557510 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
NPC2-209ENST00000557510 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
NPC2-209ENST00000557510 PLSCR1O15162 318 aa12.82□□□□□ -0.36
NPC2-209ENST00000557510 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
NPC2-209ENST00000557510 TESK2Q96S53 571 aa12.82□□□□□ -0.36
NPC2-209ENST00000557510 CDCA7Q9BWT1 371 aaPredicted RBP12.82□□□□□ -0.36
NPC2-209ENST00000557510 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
NPC2-209ENST00000557510 ERBB3P21860 1342 aa12.82□□□□□ -0.36
NPC2-209ENST00000557510 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
NPC2-209ENST00000557510 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
NPC2-209ENST00000557510 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
NPC2-209ENST00000557510 KCNQ2O43526 872 aa12.81□□□□□ -0.36
NPC2-209ENST00000557510 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
NPC2-209ENST00000557510 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
NPC2-209ENST00000557510 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
NPC2-209ENST00000557510 BTAF1O14981 1849 aa12.8□□□□□ -0.36
NPC2-209ENST00000557510 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
NPC2-209ENST00000557510 EXOC5O00471 708 aa12.79□□□□□ -0.36
NPC2-209ENST00000557510 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms