RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ADCY9O60503 1353 aa14.36□□□□□ -0.11
NEDD1-211ENST00000557454 DDB1Q16531 1140 aa14.36□□□□□ -0.11
NEDD1-211ENST00000557454 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
NEDD1-211ENST00000557454 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
NEDD1-211ENST00000557454 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
NEDD1-211ENST00000557454 COL5A2P05997 1499 aaPredicted RBP14.34□□□□□ -0.11
NEDD1-211ENST00000557454 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
NEDD1-211ENST00000557454 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
NEDD1-211ENST00000557454 MARCH10Q8NA82 808 aaPredicted RBP14.34□□□□□ -0.11
NEDD1-211ENST00000557454 ANKRD30BQ9BXX2 1392 aa14.34□□□□□ -0.11
NEDD1-211ENST00000557454 BCL9O00512 1426 aa14.33□□□□□ -0.11
NEDD1-211ENST00000557454 POLD1P28340 1107 aa14.33□□□□□ -0.12
NEDD1-211ENST00000557454 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
NEDD1-211ENST00000557454 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
NEDD1-211ENST00000557454 CPDO75976 1380 aa14.33□□□□□ -0.12
NEDD1-211ENST00000557454 CRB1P82279 1406 aa14.32□□□□□ -0.12
NEDD1-211ENST00000557454 PCNTO95613 3336 aa14.32□□□□□ -0.12
NEDD1-211ENST00000557454 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
NEDD1-211ENST00000557454 KIF3CO14782 793 aa14.32□□□□□ -0.12
NEDD1-211ENST00000557454 POGKQ9P215 609 aa14.32□□□□□ -0.12
NEDD1-211ENST00000557454 TOPAZ1Q8N9V7 1692 aa14.31□□□□□ -0.12
NEDD1-211ENST00000557454 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
NEDD1-211ENST00000557454 EIF3AQ14152 1382 aaKnown RBP14.31□□□□□ -0.12
NEDD1-211ENST00000557454 SPATA31E1Q6ZUB1 1445 aa14.29□□□□□ -0.12
NEDD1-211ENST00000557454 MINK1Q8N4C8 1332 aaPredicted RBP14.28□□□□□ -0.12
NEDD1-211ENST00000557454 C14orf93Q9H972 538 aaKnown RBP14.28□□□□□ -0.12
NEDD1-211ENST00000557454 CFAP70Q5T0N1 1121 aa14.27□□□□□ -0.13
NEDD1-211ENST00000557454 SLC16A10Q8TF71 515 aa14.27□□□□□ -0.13
NEDD1-211ENST00000557454 USP19O94966 1318 aa14.26□□□□□ -0.13
NEDD1-211ENST00000557454 ZBTB7CA1YPR0 619 aa14.25□□□□□ -0.13
NEDD1-211ENST00000557454 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
NEDD1-211ENST00000557454 TOM1L2Q6ZVM7 507 aa14.25□□□□□ -0.13
NEDD1-211ENST00000557454 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
NEDD1-211ENST00000557454 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
NEDD1-211ENST00000557454 HTRA3P83110 453 aa14.24□□□□□ -0.13
NEDD1-211ENST00000557454 LRRC4BQ9NT99 713 aa14.24□□□□□ -0.13
NEDD1-211ENST00000557454 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
NEDD1-211ENST00000557454 PNPLA7Q6ZV29 1317 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 PCDH10Q9P2E7 1040 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 WWC3Q9ULE0 1092 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
NEDD1-211ENST00000557454 GCP02774 474 aa14.22□□□□□ -0.13
NEDD1-211ENST00000557454 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
NEDD1-211ENST00000557454 WNK3Q9BYP7 1800 aa14.21□□□□□ -0.13
NEDD1-211ENST00000557454 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.13
NEDD1-211ENST00000557454 WDR90Q96KV7 1748 aa14.21□□□□□ -0.14
NEDD1-211ENST00000557454 BRD4O60885 1362 aaPredicted RBP14.21□□□□□ -0.14
NEDD1-211ENST00000557454 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
NEDD1-211ENST00000557454 TOMM70O94826 608 aa14.2□□□□□ -0.14
NEDD1-211ENST00000557454 TRAK1Q9UPV9 953 aa14.2□□□□□ -0.14
NEDD1-211ENST00000557454 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
NEDD1-211ENST00000557454 WDR17Q8IZU2 1322 aa14.18□□□□□ -0.14
NEDD1-211ENST00000557454 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
NEDD1-211ENST00000557454 ACEP12821 1306 aa14.17□□□□□ -0.14
NEDD1-211ENST00000557454 TNS2Q63HR2 1409 aa14.17□□□□□ -0.14
NEDD1-211ENST00000557454 EXOC5O00471 708 aa14.17□□□□□ -0.14
NEDD1-211ENST00000557454 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
NEDD1-211ENST00000557454 ITSN1Q15811 1721 aa14.17□□□□□ -0.14
NEDD1-211ENST00000557454 USP6P35125 1406 aa14.16□□□□□ -0.14
NEDD1-211ENST00000557454 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
NEDD1-211ENST00000557454 NLRP13Q86W25 1043 aa14.16□□□□□ -0.14
NEDD1-211ENST00000557454 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
NEDD1-211ENST00000557454 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
NEDD1-211ENST00000557454 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
NEDD1-211ENST00000557454 BTAF1O14981 1849 aa14.13□□□□□ -0.15
NEDD1-211ENST00000557454 TUBGCP6Q96RT7 1819 aa14.13□□□□□ -0.15
NEDD1-211ENST00000557454 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
NEDD1-211ENST00000557454 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
NEDD1-211ENST00000557454 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
NEDD1-211ENST00000557454 CD2APQ9Y5K6 639 aa14.13□□□□□ -0.15
NEDD1-211ENST00000557454 KCNQ4P56696 695 aa14.12□□□□□ -0.15
NEDD1-211ENST00000557454 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
NEDD1-211ENST00000557454 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
NEDD1-211ENST00000557454 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
NEDD1-211ENST00000557454 CSB-PGBD3P0DP91 1061 aa14.11□□□□□ -0.15
NEDD1-211ENST00000557454 ABCC6O95255 1503 aa14.1□□□□□ -0.15
NEDD1-211ENST00000557454 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
NEDD1-211ENST00000557454 COL18A1P39060 1754 aa14.09□□□□□ -0.15
NEDD1-211ENST00000557454 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
NEDD1-211ENST00000557454 SLIT3O75094 1523 aa14.09□□□□□ -0.15
NEDD1-211ENST00000557454 IGSF1Q8N6C5 1336 aa14.09□□□□□ -0.15
NEDD1-211ENST00000557454 CPSF1Q10570 1443 aaKnown RBP14.08□□□□□ -0.15
NEDD1-211ENST00000557454 PLEKHG3A1L390 1219 aa14.08□□□□□ -0.16
NEDD1-211ENST00000557454 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
NEDD1-211ENST00000557454 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
NEDD1-211ENST00000557454 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
NEDD1-211ENST00000557454 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.16
NEDD1-211ENST00000557454 CCDC7Q96M83 1385 aa14.07□□□□□ -0.16
NEDD1-211ENST00000557454 NLRP6P59044 892 aa14.06□□□□□ -0.16
NEDD1-211ENST00000557454 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
NEDD1-211ENST00000557454 FSTL1Q12841 308 aa14.05□□□□□ -0.16
NEDD1-211ENST00000557454 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
NEDD1-211ENST00000557454 FAM161AQ3B820 660 aa14.04□□□□□ -0.16
NEDD1-211ENST00000557454 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
NEDD1-211ENST00000557454 SOX12O15370 315 aa14.01□□□□□ -0.17
NEDD1-211ENST00000557454 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
NEDD1-211ENST00000557454 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
NEDD1-211ENST00000557454 KAT6BQ8WYB5 2073 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms