RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
HNRNPC-232ENST00000557442 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
HNRNPC-232ENST00000557442 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
HNRNPC-232ENST00000557442 RBM6P78332 1123 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-232ENST00000557442 PANK3Q9H999 370 aa14.59□□□□□ -0.07
HNRNPC-232ENST00000557442 CCDC9Q9Y3X0 531 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-232ENST00000557442 RGS12O14924 1447 aa14.58□□□□□ -0.07
HNRNPC-232ENST00000557442 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.07
HNRNPC-232ENST00000557442 PEAK1Q9H792 1746 aa14.58□□□□□ -0.08
HNRNPC-232ENST00000557442 FYB1O15117 783 aa14.58□□□□□ -0.08
HNRNPC-232ENST00000557442 THSD7AQ9UPZ6 1657 aa14.57□□□□□ -0.08
HNRNPC-232ENST00000557442 VPS72Q15906 364 aa14.57□□□□□ -0.08
HNRNPC-232ENST00000557442 ARHGEF25Q86VW2 580 aa14.57□□□□□ -0.08
HNRNPC-232ENST00000557442 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
HNRNPC-232ENST00000557442 GJD4Q96KN9 370 aaPredicted RBP14.56□□□□□ -0.08
HNRNPC-232ENST00000557442 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
HNRNPC-232ENST00000557442 NSD2O96028 1365 aa14.54□□□□□ -0.08
HNRNPC-232ENST00000557442 EP400Q96L91 3159 aa14.54□□□□□ -0.08
HNRNPC-232ENST00000557442 EVA1CP58658 441 aa14.54□□□□□ -0.08
HNRNPC-232ENST00000557442 CRB1P82279 1406 aa14.53□□□□□ -0.08
HNRNPC-232ENST00000557442 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
HNRNPC-232ENST00000557442 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
HNRNPC-232ENST00000557442 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.08
HNRNPC-232ENST00000557442 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-232ENST00000557442 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.08
HNRNPC-232ENST00000557442 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.08
HNRNPC-232ENST00000557442 MAP3K19Q56UN5 1328 aa14.52□□□□□ -0.09
HNRNPC-232ENST00000557442 LRRC37A3O60309 1634 aa14.52□□□□□ -0.09
HNRNPC-232ENST00000557442 RTL1A6NKG5 1358 aa14.52□□□□□ -0.09
HNRNPC-232ENST00000557442 FBLN1P23142 703 aa14.51□□□□□ -0.09
HNRNPC-232ENST00000557442 SPATA31A1Q5TZJ5 1347 aa14.51□□□□□ -0.09
HNRNPC-232ENST00000557442 A0A0G2JS52 829 aa14.5□□□□□ -0.09
HNRNPC-232ENST00000557442 MYT1Q01538 1121 aa14.5□□□□□ -0.09
HNRNPC-232ENST00000557442 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-232ENST00000557442 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
HNRNPC-232ENST00000557442 WDR17Q8IZU2 1322 aa14.5□□□□□ -0.09
HNRNPC-232ENST00000557442 CSB-PGBD3P0DP91 1061 aa14.49□□□□□ -0.09
HNRNPC-232ENST00000557442 AMPHP49418 695 aa14.49□□□□□ -0.09
HNRNPC-232ENST00000557442 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-232ENST00000557442 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
HNRNPC-232ENST00000557442 ERBB3P21860 1342 aa14.48□□□□□ -0.09
HNRNPC-232ENST00000557442 FLT4P35916 1363 aa14.48□□□□□ -0.09
HNRNPC-232ENST00000557442 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
HNRNPC-232ENST00000557442 HOXC9P31274 260 aa14.47□□□□□ -0.09
HNRNPC-232ENST00000557442 TNNT2P45379 298 aaPredicted RBP14.47□□□□□ -0.09
HNRNPC-232ENST00000557442 IP6K1Q92551 441 aa14.47□□□□□ -0.09
HNRNPC-232ENST00000557442 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.09
HNRNPC-232ENST00000557442 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
HNRNPC-232ENST00000557442 SEPT12Q8IYM1 358 aa14.46□□□□□ -0.09
HNRNPC-232ENST00000557442 TCP11L2Q8N4U5 519 aa14.46□□□□□ -0.09
HNRNPC-232ENST00000557442 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
HNRNPC-232ENST00000557442 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 SOCS7O14512 581 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 EMILIN1Q9Y6C2 1016 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 KAT6BQ8WYB5 2073 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 RGPD1P0DJD0 1748 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
HNRNPC-232ENST00000557442 PPM1GO15355 546 aaPredicted RBP14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 ONECUT3O60422 494 aaPredicted RBP14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 BARGINQ6ZT62 677 aa14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 THRAP3Q9Y2W1 955 aaKnown RBP14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 INSRP06213 1382 aa14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
HNRNPC-232ENST00000557442 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
HNRNPC-232ENST00000557442 NLRP2Q9NX02 1062 aa14.43□□□□□ -0.1
HNRNPC-232ENST00000557442 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
HNRNPC-232ENST00000557442 TNS1Q9HBL0 1735 aaKnown RBP14.42□□□□□ -0.1
HNRNPC-232ENST00000557442 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
HNRNPC-232ENST00000557442 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
HNRNPC-232ENST00000557442 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
HNRNPC-232ENST00000557442 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
HNRNPC-232ENST00000557442 KRT27Q7Z3Y8 459 aa14.41□□□□□ -0.1
HNRNPC-232ENST00000557442 PKD1L3Q7Z443 1732 aa14.4□□□□□ -0.1
HNRNPC-232ENST00000557442 TNS2Q63HR2 1409 aa14.39□□□□□ -0.11
HNRNPC-232ENST00000557442 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
HNRNPC-232ENST00000557442 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-232ENST00000557442 DOT1LQ8TEK3 1739 aa14.37□□□□□ -0.11
HNRNPC-232ENST00000557442 MEGF6O75095 1541 aa14.37□□□□□ -0.11
HNRNPC-232ENST00000557442 DDX10Q13206 875 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-232ENST00000557442 PDE3BQ13370 1112 aa14.37□□□□□ -0.11
HNRNPC-232ENST00000557442 DDB1Q16531 1140 aa14.37□□□□□ -0.11
HNRNPC-232ENST00000557442 IL2RBP14784 551 aa14.36□□□□□ -0.11
HNRNPC-232ENST00000557442 FAM182BQ5T319 152 aa14.36□□□□□ -0.11
HNRNPC-232ENST00000557442 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
HNRNPC-232ENST00000557442 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
HNRNPC-232ENST00000557442 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
HNRNPC-232ENST00000557442 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
HNRNPC-232ENST00000557442 NCAPD2Q15021 1401 aa14.35□□□□□ -0.11
HNRNPC-232ENST00000557442 NHSQ6T4R5 1651 aa14.35□□□□□ -0.11
HNRNPC-232ENST00000557442 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-232ENST00000557442 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.11
HNRNPC-232ENST00000557442 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
HNRNPC-232ENST00000557442 MTHFSP49914 203 aa14.33□□□□□ -0.12
HNRNPC-232ENST00000557442 ITGB4P16144 1822 aa14.33□□□□□ -0.12
HNRNPC-232ENST00000557442 BTAF1O14981 1849 aa14.32□□□□□ -0.12
HNRNPC-232ENST00000557442 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms