RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CASZ1Q86V15 1759 aa20.3■□□□□ 0.84
SLIRP-210ENST00000557431 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
SLIRP-210ENST00000557431 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
SLIRP-210ENST00000557431 BRD4O60885 1362 aaPredicted RBP20.29■□□□□ 0.84
SLIRP-210ENST00000557431 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
SLIRP-210ENST00000557431 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
SLIRP-210ENST00000557431 NFAT5O94916 1531 aa20.27■□□□□ 0.83
SLIRP-210ENST00000557431 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.83
SLIRP-210ENST00000557431 ROCK2O75116 1388 aaKnown RBP20.26■□□□□ 0.83
SLIRP-210ENST00000557431 DDB1Q16531 1140 aa20.26■□□□□ 0.83
SLIRP-210ENST00000557431 NBPF14Q5TI25 921 aa20.26■□□□□ 0.83
SLIRP-210ENST00000557431 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
SLIRP-210ENST00000557431 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
SLIRP-210ENST00000557431 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
SLIRP-210ENST00000557431 MYOM1P52179 1685 aa20.22■□□□□ 0.83
SLIRP-210ENST00000557431 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
SLIRP-210ENST00000557431 ARHGEF25Q86VW2 580 aa20.22■□□□□ 0.83
SLIRP-210ENST00000557431 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
SLIRP-210ENST00000557431 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
SLIRP-210ENST00000557431 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
SLIRP-210ENST00000557431 BTAF1O14981 1849 aa20.2■□□□□ 0.82
SLIRP-210ENST00000557431 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
SLIRP-210ENST00000557431 KCNQ2O43526 872 aa20.19■□□□□ 0.82
SLIRP-210ENST00000557431 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
SLIRP-210ENST00000557431 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
SLIRP-210ENST00000557431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
SLIRP-210ENST00000557431 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
SLIRP-210ENST00000557431 PROM2Q8N271 834 aa20.17■□□□□ 0.82
SLIRP-210ENST00000557431 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
SLIRP-210ENST00000557431 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
SLIRP-210ENST00000557431 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
SLIRP-210ENST00000557431 PLSCR1O15162 318 aa20.16■□□□□ 0.82
SLIRP-210ENST00000557431 KCNH5Q8NCM2 988 aa20.16■□□□□ 0.82
SLIRP-210ENST00000557431 ZNF692Q9BU19 519 aaPredicted RBP20.16■□□□□ 0.82
SLIRP-210ENST00000557431 NME9Q86XW9 330 aa20.15■□□□□ 0.82
SLIRP-210ENST00000557431 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
SLIRP-210ENST00000557431 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
SLIRP-210ENST00000557431 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
SLIRP-210ENST00000557431 ZBTB7AO95365 584 aa20.13■□□□□ 0.81
SLIRP-210ENST00000557431 ACSBG1Q96GR2 724 aa20.13■□□□□ 0.81
SLIRP-210ENST00000557431 ABCC6O95255 1503 aa20.12■□□□□ 0.81
SLIRP-210ENST00000557431 YY1P25490 414 aa20.12■□□□□ 0.81
SLIRP-210ENST00000557431 TUBGCP6Q96RT7 1819 aa20.11■□□□□ 0.81
SLIRP-210ENST00000557431 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
SLIRP-210ENST00000557431 TXNRD1Q16881 649 aa20.11■□□□□ 0.81
SLIRP-210ENST00000557431 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
SLIRP-210ENST00000557431 CDCA7Q9BWT1 371 aaPredicted RBP20.11■□□□□ 0.81
SLIRP-210ENST00000557431 BCL9O00512 1426 aa20.1■□□□□ 0.81
SLIRP-210ENST00000557431 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
SLIRP-210ENST00000557431 EXOC5O00471 708 aa20.1■□□□□ 0.81
SLIRP-210ENST00000557431 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
SLIRP-210ENST00000557431 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
SLIRP-210ENST00000557431 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
SLIRP-210ENST00000557431 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
SLIRP-210ENST00000557431 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
SLIRP-210ENST00000557431 ERBB3P21860 1342 aa20.08■□□□□ 0.81
SLIRP-210ENST00000557431 CHD4Q14839 1912 aa20.08■□□□□ 0.81
SLIRP-210ENST00000557431 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.81
SLIRP-210ENST00000557431 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
SLIRP-210ENST00000557431 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
SLIRP-210ENST00000557431 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
SLIRP-210ENST00000557431 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
SLIRP-210ENST00000557431 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
SLIRP-210ENST00000557431 A0A1W2PP64 1363 aa20.06■□□□□ 0.8
SLIRP-210ENST00000557431 PTGER2P43116 358 aa20.05■□□□□ 0.8
SLIRP-210ENST00000557431 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
SLIRP-210ENST00000557431 ANKRD24Q8TF21 1146 aa20.04■□□□□ 0.8
SLIRP-210ENST00000557431 EDC4Q6P2E9 1401 aaKnown RBP20.02■□□□□ 0.8
SLIRP-210ENST00000557431 IL2RBP14784 551 aa20.02■□□□□ 0.8
SLIRP-210ENST00000557431 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.8
SLIRP-210ENST00000557431 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
SLIRP-210ENST00000557431 FBLN1P23142 703 aa20.01■□□□□ 0.79
SLIRP-210ENST00000557431 QSER1Q2KHR3 1735 aa20.01■□□□□ 0.79
SLIRP-210ENST00000557431 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
SLIRP-210ENST00000557431 LY75O60449 1722 aa19.99■□□□□ 0.79
SLIRP-210ENST00000557431 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
SLIRP-210ENST00000557431 DCAF8L1A6NGE4 600 aa19.98■□□□□ 0.79
SLIRP-210ENST00000557431 FHDC1Q9C0D6 1143 aaPredicted RBP19.98■□□□□ 0.79
SLIRP-210ENST00000557431 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
SLIRP-210ENST00000557431 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
SLIRP-210ENST00000557431 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
SLIRP-210ENST00000557431 KCNQ4P56696 695 aa19.95■□□□□ 0.78
SLIRP-210ENST00000557431 SGIP1Q9BQI5 828 aa19.95■□□□□ 0.78
SLIRP-210ENST00000557431 SYT17Q9BSW7 474 aa19.95■□□□□ 0.78
SLIRP-210ENST00000557431 MTFR1LQ9H019 292 aa19.95■□□□□ 0.78
SLIRP-210ENST00000557431 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
SLIRP-210ENST00000557431 COL24A1Q17RW2 1714 aa19.94■□□□□ 0.78
SLIRP-210ENST00000557431 IP6K1Q92551 441 aa19.93■□□□□ 0.78
SLIRP-210ENST00000557431 MEGF6O75095 1541 aa19.92■□□□□ 0.78
SLIRP-210ENST00000557431 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
SLIRP-210ENST00000557431 TESK2Q96S53 571 aa19.92■□□□□ 0.78
SLIRP-210ENST00000557431 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
SLIRP-210ENST00000557431 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
SLIRP-210ENST00000557431 ITGB4P16144 1822 aa19.9■□□□□ 0.78
SLIRP-210ENST00000557431 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
SLIRP-210ENST00000557431 HOXC9P31274 260 aa19.89■□□□□ 0.77
SLIRP-210ENST00000557431 UTRNP46939 3433 aa19.89■□□□□ 0.77
SLIRP-210ENST00000557431 KLHL34Q8N239 644 aa19.89■□□□□ 0.77
SLIRP-210ENST00000557431 AMPHP49418 695 aa19.88■□□□□ 0.77
SLIRP-210ENST00000557431 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms