RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
VPS33B-206ENST00000557358 USP54Q70EL1 1684 aa19.08■□□□□ 0.65
VPS33B-206ENST00000557358 BARGINQ6ZT62 677 aa19.08■□□□□ 0.64
VPS33B-206ENST00000557358 ZRANB1Q9UGI0 708 aa19.08■□□□□ 0.64
VPS33B-206ENST00000557358 CRB1P82279 1406 aa19.08■□□□□ 0.64
VPS33B-206ENST00000557358 ABCC6O95255 1503 aa19.07■□□□□ 0.64
VPS33B-206ENST00000557358 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
VPS33B-206ENST00000557358 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
VPS33B-206ENST00000557358 NFAT5O94916 1531 aa19.06■□□□□ 0.64
VPS33B-206ENST00000557358 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
VPS33B-206ENST00000557358 OVOS2A0A0J9YW53 1432 aa19.05■□□□□ 0.64
VPS33B-206ENST00000557358 OVOS2Q6IE36 1432 aa19.05■□□□□ 0.64
VPS33B-206ENST00000557358 AMPHP49418 695 aa19.04■□□□□ 0.64
VPS33B-206ENST00000557358 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
VPS33B-206ENST00000557358 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
VPS33B-206ENST00000557358 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
VPS33B-206ENST00000557358 NSD3Q9BZ95 1437 aa19.02■□□□□ 0.64
VPS33B-206ENST00000557358 LTN1O94822 1766 aa19.02■□□□□ 0.64
VPS33B-206ENST00000557358 COL18A1P39060 1754 aa19.02■□□□□ 0.64
VPS33B-206ENST00000557358 C11orf95C9JLR9 678 aaPredicted RBP19.02■□□□□ 0.64
VPS33B-206ENST00000557358 FYB1O15117 783 aa19.02■□□□□ 0.64
VPS33B-206ENST00000557358 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.64
VPS33B-206ENST00000557358 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
VPS33B-206ENST00000557358 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
VPS33B-206ENST00000557358 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 CCDC7Q96M83 1385 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 MYOM1P52179 1685 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 THSD7AQ9UPZ6 1657 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 RGPD5Q99666 1765 aa19■□□□□ 0.63
VPS33B-206ENST00000557358 IP6K1Q92551 441 aa18.99■□□□□ 0.63
VPS33B-206ENST00000557358 DDB1Q16531 1140 aa18.98■□□□□ 0.63
VPS33B-206ENST00000557358 ANKRD24Q8TF21 1146 aa18.98■□□□□ 0.63
VPS33B-206ENST00000557358 ERBB3P21860 1342 aa18.98■□□□□ 0.63
VPS33B-206ENST00000557358 CARD14Q9BXL6 1004 aa18.97■□□□□ 0.63
VPS33B-206ENST00000557358 BAG6P46379 1132 aa18.96■□□□□ 0.63
VPS33B-206ENST00000557358 PANK3Q9H999 370 aa18.96■□□□□ 0.63
VPS33B-206ENST00000557358 MAP3K19Q56UN5 1328 aa18.96■□□□□ 0.63
VPS33B-206ENST00000557358 RTL1A6NKG5 1358 aa18.95■□□□□ 0.62
VPS33B-206ENST00000557358 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
VPS33B-206ENST00000557358 LTV1Q96GA3 475 aaPredicted RBP18.95■□□□□ 0.62
VPS33B-206ENST00000557358 EP400Q96L91 3159 aa18.94■□□□□ 0.62
VPS33B-206ENST00000557358 HOXC9P31274 260 aa18.94■□□□□ 0.62
VPS33B-206ENST00000557358 KNSTRNQ9Y448 316 aa18.94■□□□□ 0.62
VPS33B-206ENST00000557358 EXOC5O00471 708 aa18.93■□□□□ 0.62
VPS33B-206ENST00000557358 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
VPS33B-206ENST00000557358 PARP4Q9UKK3 1724 aaKnown RBP18.93■□□□□ 0.62
VPS33B-206ENST00000557358 KIF24Q5T7B8 1368 aa18.93■□□□□ 0.62
VPS33B-206ENST00000557358 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
VPS33B-206ENST00000557358 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
VPS33B-206ENST00000557358 IL2RBP14784 551 aa18.91■□□□□ 0.62
VPS33B-206ENST00000557358 NSD2O96028 1365 aa18.91■□□□□ 0.62
VPS33B-206ENST00000557358 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
VPS33B-206ENST00000557358 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
VPS33B-206ENST00000557358 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
VPS33B-206ENST00000557358 FLT4P35916 1363 aa18.9■□□□□ 0.62
VPS33B-206ENST00000557358 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
VPS33B-206ENST00000557358 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
VPS33B-206ENST00000557358 TRIM37O94972 964 aa18.88■□□□□ 0.61
VPS33B-206ENST00000557358 FBLN1P23142 703 aa18.88■□□□□ 0.61
VPS33B-206ENST00000557358 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
VPS33B-206ENST00000557358 INSRP06213 1382 aa18.86■□□□□ 0.61
VPS33B-206ENST00000557358 DEFB132Q7Z7B7 95 aa18.86■□□□□ 0.61
VPS33B-206ENST00000557358 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
VPS33B-206ENST00000557358 LRRC37A3O60309 1634 aa18.85■□□□□ 0.61
VPS33B-206ENST00000557358 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
VPS33B-206ENST00000557358 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
VPS33B-206ENST00000557358 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
VPS33B-206ENST00000557358 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
VPS33B-206ENST00000557358 APBA3O96018 575 aa18.84■□□□□ 0.61
VPS33B-206ENST00000557358 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
VPS33B-206ENST00000557358 TNS2Q63HR2 1409 aa18.83■□□□□ 0.61
VPS33B-206ENST00000557358 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.61
VPS33B-206ENST00000557358 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.6
VPS33B-206ENST00000557358 EMILIN1Q9Y6C2 1016 aa18.83■□□□□ 0.6
VPS33B-206ENST00000557358 EN1Q05925 392 aaPredicted RBP18.81■□□□□ 0.6
VPS33B-206ENST00000557358 MARCH10Q8NA82 808 aaPredicted RBP18.81■□□□□ 0.6
VPS33B-206ENST00000557358 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
VPS33B-206ENST00000557358 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
VPS33B-206ENST00000557358 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
VPS33B-206ENST00000557358 POLKQ9UBT6 870 aa18.79■□□□□ 0.6
VPS33B-206ENST00000557358 BCL9O00512 1426 aa18.78■□□□□ 0.6
VPS33B-206ENST00000557358 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
VPS33B-206ENST00000557358 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
VPS33B-206ENST00000557358 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
VPS33B-206ENST00000557358 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
VPS33B-206ENST00000557358 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
VPS33B-206ENST00000557358 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.6
VPS33B-206ENST00000557358 PEAK1Q9H792 1746 aa18.76■□□□□ 0.59
VPS33B-206ENST00000557358 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
VPS33B-206ENST00000557358 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
VPS33B-206ENST00000557358 NBPF14Q5TI25 921 aa18.75■□□□□ 0.59
VPS33B-206ENST00000557358 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
VPS33B-206ENST00000557358 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
VPS33B-206ENST00000557358 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
VPS33B-206ENST00000557358 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
VPS33B-206ENST00000557358 CAMKK2Q96RR4 588 aa18.73■□□□□ 0.59
VPS33B-206ENST00000557358 PLSCR1O15162 318 aa18.72■□□□□ 0.59
VPS33B-206ENST00000557358 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms