RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-209	ENST00000557249	GPR161	Q8N6U8	529 aa	Known RBP	5.2	□□□□□ -1.58
PTPN21-209	ENST00000557249	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.2	□□□□□ -1.58
PTPN21-209	ENST00000557249	KRT76	Q01546	638 aa		5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	DHX9	Q08211	1270 aa	Known RBP	5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	SV2A	Q7L0J3	742 aa		5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	SH3RF1	Q7Z6J0	888 aa		5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	ZC3H15	Q8WU90	426 aa	Known RBP	5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	NANOS1	Q8WY41	292 aa	Known RBP	5.19	□□□□□ -1.58
PTPN21-209	ENST00000557249	IRS1	P35568	1242 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	GSK3A	P49840	483 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	MAP3K10	Q02779	954 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	GPAT2	Q6NUI2	795 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	SH3BP5L	Q7L8J4	393 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	VWA5B2	Q8N398	1253 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	SLC10A4	Q96EP9	437 aa		5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	SCARF2	Q96GP6	870 aa	Predicted RBP	5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	CDV3	Q9UKY7	258 aa	Known RBP	5.18	□□□□□ -1.58
PTPN21-209	ENST00000557249	TRIM66	O15016	1216 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	SPINT1	O43278	529 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	IGHA1	P01876	353 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	ITGA6	P23229	1130 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	CBLB	Q13191	982 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	QPCT	Q16769	361 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	TUSC1	Q2TAM9	212 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	ERFE	Q4G0M1	354 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	ZNF385C	Q66K41	422 aa	Predicted RBP	5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	KANK3	Q6NY19	840 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	ZBTB33	Q86T24	672 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	AK7	Q96M32	723 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	ARHGAP9	Q9BRR9	750 aa		5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	POLM	Q9NP87	494 aa	Predicted RBP	5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.17	□□□□□ -1.58
PTPN21-209	ENST00000557249	LILRB3	O75022	631 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	FOXK2	Q01167	660 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	RELB	Q01201	579 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	MYSM1	Q5VVJ2	828 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249		Q6ZVU0	165 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	KCTD15	Q96SI1	283 aa	Predicted RBP	5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	LIMD1	Q9UGP4	676 aa		5.16	□□□□□ -1.58
PTPN21-209	ENST00000557249	SLC35F4	A4IF30	521 aa		5.15	□□□□□ -1.59
PTPN21-209	ENST00000557249	SLURP2	P0DP57	97 aa		5.15	□□□□□ -1.59
PTPN21-209	ENST00000557249	RNFT1	Q5M7Z0	435 aa		5.15	□□□□□ -1.59
PTPN21-209	ENST00000557249	PDXDC2P	Q6P474	469 aa		5.15	□□□□□ -1.59
PTPN21-209	ENST00000557249	ENAM	Q9NRM1	1142 aa		5.15	□□□□□ -1.59
PTPN21-209	ENST00000557249	CTSO	P43234	321 aa	Predicted RBP	5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	CLK2	P49760	499 aa	Known RBP	5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	RTL5	Q5HYW3	569 aa	Predicted RBP	5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	AGBL1	Q96MI9	1066 aa		5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	INSM2	Q96T92	566 aa	Predicted RBP	5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	RSPH6A	Q9H0K4	717 aa		5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	ATP1B4	Q9UN42	357 aa	Predicted RBP	5.14	□□□□□ -1.59
PTPN21-209	ENST00000557249	WHAMM	Q8TF30	809 aa		5.13	□□□□□ -1.59
PTPN21-209	ENST00000557249	TRIM52	Q96A61	297 aa		5.13	□□□□□ -1.59
PTPN21-209	ENST00000557249	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.13	□□□□□ -1.59
PTPN21-209	ENST00000557249	FKBPL	Q9UIM3	349 aa		5.13	□□□□□ -1.59
PTPN21-209	ENST00000557249	ARHGEF15	O94989	841 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	ADAMTS2	O95450	1211 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	PTK2	Q05397	1052 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	NBPF20	Q3BBV1	942 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	FOXR1	Q6PIV2	292 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	PNMA1	Q8ND90	353 aa		5.12	□□□□□ -1.59
PTPN21-209	ENST00000557249	PHF20L1	A8MW92	1017 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	RAB15	P59190	212 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	SRSF11	Q05519	484 aa	Known RBP	5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	CTDSPL2	Q05D32	466 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	PDE4D	Q08499	809 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	INTS6L	Q5JSJ4	861 aa	Known RBP	5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	PODN	Q7Z5L7	613 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	RNF217	Q8TC41	542 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	POLR3E	Q9NVU0	708 aa		5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	ZC3H4	Q9UPT8	1303 aa	Known RBP	5.11	□□□□□ -1.59
PTPN21-209	ENST00000557249	LYSMD3	Q7Z3D4	306 aa		5.1	□□□□□ -1.59
PTPN21-209	ENST00000557249	LYPD4	Q6UWN0	246 aa		5.09	□□□□□ -1.59
PTPN21-209	ENST00000557249	DZIP3	Q86Y13	1208 aa	Known RBP	5.09	□□□□□ -1.59
PTPN21-209	ENST00000557249	NEDD1	Q8NHV4	660 aa		5.09	□□□□□ -1.59
PTPN21-209	ENST00000557249	GPSM3	Q9Y4H4	160 aa		5.09	□□□□□ -1.59
PTPN21-209	ENST00000557249	MSTN	O14793	375 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	ADH1A	P07327	375 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	CELA2B	P08218	269 aa	Predicted RBP	5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	PTGIR	P43119	386 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	NR6A1	Q15406	480 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	BEND7	Q8N7W2	519 aa	Predicted RBP	5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	ADAM32	Q8TC27	787 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	LRRN4	Q8WUT4	740 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	TMPRSS4	Q9NRS4	437 aa		5.08	□□□□□ -1.6
PTPN21-209	ENST00000557249	SENP3-EIF4A1	A0A087X0R7	540 aa		5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	RIPOR1	Q6ZS17	1223 aa		5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	PRICKLE2	Q7Z3G6	844 aa		5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	ZNF784	Q8NCA9	323 aa	Predicted RBP	5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	GALNT6	Q8NCL4	622 aa		5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	GMCL1	Q96IK5	515 aa		5.07	□□□□□ -1.6
PTPN21-209	ENST00000557249	TRERF1	Q96PN7	1200 aa		5.06	□□□□□ -1.6
PTPN21-209	ENST00000557249	MBIP	Q9NS73	344 aa		5.06	□□□□□ -1.6
PTPN21-209	ENST00000557249	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.06	□□□□□ -1.6
PTPN21-209	ENST00000557249		H7C1W4	665 aa		5.05	□□□□□ -1.6
PTPN21-209	ENST00000557249	ERVH48-1	M5A8F1	160 aa		5.05	□□□□□ -1.6
PTPN21-209	ENST00000557249	AP1G2	O75843	785 aa		5.05	□□□□□ -1.6
PTPN21-209	ENST00000557249	BCR	P11274	1271 aa		5.05	□□□□□ -1.6
PTPN21-209	ENST00000557249	RHOQ	P17081	205 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms